Argopecten irradians (bay scallop): 138320609
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Entry
138320609 CDS
T10542
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138320609
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
airr04147
]
138320609
Membrane trafficking [BR:
airr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
138320609
Exosome [BR:
airr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
138320609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
138320609
NCBI-ProteinID:
XP_069119809
LinkDB
All DBs
Position
1:complement(21360768..21376115)
Genome browser
AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKCVDLHPSEPWMLASLYNGNVHIWNYESQQLIKSFEVCDLPV
RSARFIPRKNWIITGSDDMSIRAFNYNTLERVHQFEAHSDYIRSLAVHPTQPFILSSSDD
MLIKLWDWEKKWTCTQVFEGHTHYVMQIIINPKDNNTFASGSLDRTVKVWQLGSPTPNFT
LEGHEKGVNCLDYYTGGDKPYLISGADDRLIKIWDYQNKTCVQTLEGHAQNISTVSFHPE
LPIIMTGSEDGTVRIWHANTYRLESTLNYGLERVWTIACQKGSNNVALGYDEGSIIIKLG
REEPAMSMDNSGKIIWAKHSEIQQANIKAISDTEIKDGERLPLAVKDMGSCEIYPQNVAH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWSNDSSIYATRESTSMVKIFKNFKE
QKSFKPDFGAEGIYGGHMLGVRSVSGLAFYEWDSTELIRRIEITPKFVSWSENGELVCIC
TDDSFFILKYNAEAVEKAKENKDDITEDGIEEAFDVVGEIEETVKTGIWVGDCFIYTNSV
NRLNYYVGGEIVTVAHLDRMMYLLGYIPKDNRLYLGDKELNVVSYSLLLSVLEYQTSVMR
RDFETADKVLPTVPKEHRTRVAHFLEKQGFKSQALAVTCDSEHKFELAVQLGDLKIAYQI
AKESEAEQKWKQLAELAISKCEFGLAQECLHQAQDFGGLLLLASSAGNSQMVARLGETAA
KAGQNNVAFISNFVLGKLEECLEVLIKTERIPEAAFFARTYLPSQVTRVVELWREQLAKV
NQKAASSLAAPDEYENLFPGLKEALKTEQYLRPQRSQLLPANSYPNVPPNSGRVPVEEMN
QAEERGAFHFTPSGAQDEDDDEQFEEASAPVPQAPATEPSQKPADAPTQDGQLSSADMAD
IEQELELDLENLNMDNIDASAVDDKELTNDEDVNLDEEFLED
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgtttagatatcaagcggaaattgtctgctaggtcagaccgagtaaaatgt
gtagacctccacccatctgagccatggatgttggctagtttgtacaacggcaatgttcat
atatggaactacgaatcacaacaattgataaaatcctttgaagtatgtgatttgcctgtg
aggtctgcaagattcatccctaggaagaattggattataacgggatctgatgacatgtca
atccgggcgtttaactacaacacactggagagagttcaccagtttgaggctcattcggac
tacatccgctctcttgccgttcatccaacacagccatttatccttagtagcagcgacgac
atgctgatcaagttgtgggactgggagaagaagtggacgtgcacacaagtgtttgaaggc
catactcactatgtgatgcagatcatcattaatcctaaagataacaacacattcgctagt
ggttctctcgacaggactgtcaaggtttggcagctgggctccccaacaccaaacttcacc
ctggaaggacatgagaaaggcgttaactgtctagattattacacagggggagataagcca
taccttatctctggagctgatgacagacttatcaaaatctgggactaccagaacaagacc
tgtgtacagacactggaaggacacgcccaaaacatttcaacagtctccttccacccagaa
ctccccattatcatgacaggctcagaagatgggacagttcgtatctggcatgctaacacc
tacagattggagagtacgttgaactatggactagagagggtgtggactattgcttgtcag
aaaggatccaataatgttgcccttggatatgacgaaggaagcattatcatcaagctcgga
agagaagagccagcaatgtctatggataacagtggaaagatcatctgggccaaacactca
gaaatccaacaggccaatatcaaggccatcagtgataccgagatcaaggatggcgagcgt
ctacctctagctgtcaaagatatgggaagctgtgagatataccctcaaaatgtcgcccac
aaccctaatggaagatttgtagtggtttgtggagatggagaatacattatatacacagct
atggctttaaggaacaagagctttgggtcagcccaggaatttgtgtggagtaacgactcg
tccatctatgctacaagggaaagcaccagtatggtgaaaatcttcaaaaactttaaagaa
cagaagtcttttaaacctgactttggtgctgaaggtatatatggtggtcacatgcttggt
gtaaggtcagtcagtggactggctttttatgaatgggacagtaccgaactcattagaagg
atagaaatcacacccaagtttgtgtcctggagtgagaatggtgaattggtgtgtatatgc
actgacgactccttttttatactcaaatacaatgctgaggctgtagagaaagccaaggag
aacaaggacgacatcacagaggacggaatcgaggaggccttcgatgtggttggcgaaatt
gaggagacagtaaaaactggtatctgggttggggactgtttcatctacacaaacagtgtc
aaccgtctcaactactatgtcggcggagagattgttacagtcgcccaccttgataggatg
atgtacctgcttggctacatccccaaagataaccgactttaccttggtgataaggaactt
aacgtggtcagctattcgctgttattgtccgtacttgagtatcaaacttctgtgatgagg
agagactttgaaacagccgacaaggttctacctactgttcccaaggaacatcgaacaaga
gtggcccacttcctagaaaaacagggatttaagtctcaagctcttgctgtaacttgtgac
tcagaacataagtttgaacttgctgtacaactaggagatctgaagatagcttaccaaata
gctaaagaatctgaggctgaacagaaatggaaacagctggcagagttggcgataagtaaa
tgtgagtttgggctggcccaggaatgtttacaccaagctcaggacttcggtggtctctta
ctcctcgccagctcagcaggaaacagtcagatggtagccagacttggagaaactgccgcc
aaagctggtcaaaacaatgtagctttcatctctaactttgtactggggaaattggaggag
tgtttagaagtattaattaagacagaacgaattccagaggcggctttttttgccagaacc
tacctgcccagtcaggtgacaagggtagtagagctgtggagagaacaattagccaaagtg
aatcagaaagcagccagctccctggcagctcctgatgagtatgaaaacctgtttcctggt
ctgaaggaggcactgaaaacagaacaatacctacggccacagcgatctcaactccttccc
gctaacagttaccccaatgtcccgcccaactcaggccgtgtgccagttgaggaaatgaat
caagctgaagagagaggggcattccacttcactccgagtggagcacaagatgaagatgat
gatgaacagtttgaggaagcctcagcccctgtaccacaggcaccagccacagaaccttcc
caaaagcctgctgacgcaccaacacaagatggacagttatcaagcgcagacatggcagac
attgaacaagaattagaactagaccttgagaatctgaatatggataatattgatgcgtcg
gcagtagatgacaaagagctaacaaatgacgaggatgtgaatttggatgaagagtttctt
gaggattga
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