Argopecten irradians (bay scallop): 138321157
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Entry
138321157 CDS
T10542
Name
(RefSeq) toll-like receptor 4 isoform X1
KO
K10160
toll-like receptor 4
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04145
Phagosome
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138321157
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138321157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138321157
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
airr04054
]
138321157
04090 CD molecules [BR:
airr04090
]
138321157
00536 Glycosaminoglycan binding proteins [BR:
airr00536
]
138321157
Membrane trafficking [BR:
airr04131
]
Endocytosis
Phagocytosis
Toll-like receptors
138321157
Pattern recognition receptors [BR:
airr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
138321157
CD molecules [BR:
airr04090
]
Proteins
138321157
Glycosaminoglycan binding proteins [BR:
airr00536
]
Hyaluronan
Cell surface receptors
138321157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
ThsB_TIR
H_lectin
Motif
Other DBs
NCBI-GeneID:
138321157
NCBI-ProteinID:
XP_069120717
LinkDB
All DBs
Position
4:27831820..27866737
Genome browser
AA seq
910 aa
AA seq
DB search
MLPYKTPQRKQHDANRGRNMATMKFVVVVLAVVMMEAVNGYSGMQNHQHCVSDVRCRCNG
SEDTGLVADCSNLNISSIPKFYSNVTKILLQRNNIKHLKIEDRQFPRSVLYLDISENKLE
TFVDDPFRSMDSLVYLDLGNNLLKYMPNVFPRNVFKGLKSLSYLNLQGNNVLNTLHPDNL
SYPVSIGDIAMLTTCLLDGVDQTGFPSEFKDLLHLEVLDLGNEAATCELPILRSNYFENV
TSVRNLSLSYCQIRFIENGTFLKLTQLYFLNVSNNDRLTFGVMSNLTSDLKALPIHTLDI
SRIHCDYGPGTSIYVDDVVNLRNHTHLRRLYLNNNRLSLPEFGVISLLPKSLRFISANQN
RLTFGSYVFELAGFINLEYFDGSRQYTSHDPDTGSRDCKDWRAPPTYSNDFQAIPSILTN
LQDFSSSIQQMSSTKLVATNVSQVSRPNDSLTSTNSIVSSPPTFPVPGNLREVLFFGSVL
DYEIRVVPLGPNNLTRVDIHGNLLHSWSGTVLNIDKVKFIDGSNNYCTYISDNFFDHCEN
LEELLLHDNLLGNVLKTDENGNIFRRLVHLKLLDLSWNRIQEVPNLLLKNQNNLQILNIS
NNEMLTFDLNFEHMNNLQYLNLSKNRLSLLSKQTRKQIDSCRSHNLTVNLYGNKLQCSCE
TLDFLKWLGERRNTFDDFHSYECRFPDETTGNFSDFENVLIRLKTSCNKYTGLIVGTTFG
VCLAISLTLSGIVYRYRWKIRYLYYMTKTKYRGYSSLVTDYEDRDEYPYDAFVSYCEKDG
RFVRGDLLNNLERQNGLTLCLHQRDFIPGHDIAENITKAIHQSRKTIVIVSKSYLKSYWC
MYEFNMARMESIYAREGNSVLLLVFYDNVEPTDLPLTLMDLIDSKSYIEYPDDEQGNVVF
WGKLAESISM
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgctgccatataaaacgccgcaacgaaaacaacacgacgccaatcgaggccgtaatatg
gccacaatgaaatttgtcgttgttgttttggcagtggtgatgatggaggcagtgaatgga
tattctggtatgcaaaatcatcaacattgtgtatctgatgtaagatgtcgatgtaacggg
tctgaggataccggactggtagcagattgctcaaatctgaacatttccagtattccgaaa
ttctactcaaacgtcaccaagattttgttacagagaaacaatattaaacatctcaaaata
gaggacagacagtttccaagatctgttttgtacctggatatttcagaaaataaactggaa
acttttgttgacgatccatttaggagcatggattctttagtttacctggatctcggtaac
aatttattaaagtacatgccaaatgtttttccaaggaacgtattcaaaggattgaaaagt
ttatcatatctcaatttacaaggtaacaatgtgttaaatacattacatccagataatttg
tcatatccagtgagtataggagatattgcgatgcttacgacatgcctactggacggggta
gatcaaacaggatttccaagcgaattcaaggatctactacacctagaagtactagattta
ggtaatgaagcagcaacttgtgaattaccgatcttacgatctaattactttgagaacgtg
acatctgtgcgtaatctaagtttgtcttattgtcagattcgctttattgaaaacggaacg
ttcctcaagctcactcagttatactttttaaatgtatctaacaatgacagactaacattc
ggcgtgatgtcaaacttgacgagtgatttgaaggctttaccaatccataccctggatata
agtaggatccactgtgactatgggccaggaacttcgatatatgtagatgatgtcgtaaac
ttgagaaaccatacacaccttaggagattatacttaaacaataatagattgtcccttccg
gagtttggtgttatttcgttattaccaaaaagtttacgattcatttcggcaaaccagaac
agacttacttttggttcttacgtatttgagttagccggctttatcaatttggaatacttt
gacggtagtagacaatacacatcacatgatccagatactggttctagggattgcaaagac
tggagagctccaccaacttactcaaatgactttcaagcaattccatccatccttacaaac
ttgcaggatttctcatctagcatccagcagatgtcctccaccaaacttgtcgcaacaaat
gtgtcgcaagtatctagaccaaatgactccctgacatcaacaaattccatcgtatcttca
ccaccgacttttcctgttcccggtaaccttagagaggtgcttttctttggaagtgtgtta
gattatgaaataagagttgttcctcttgggccaaacaacttaacacgtgtcgacattcat
ggaaacttattgcattcatggagtggtacagtgctaaatattgacaaggttaagtttatt
gacgggtctaataactactgtacatatatatcagataatttctttgaccattgtgaaaac
ctagaagagctccttttacacgacaatctactgggaaatgttctgaagaccgatgaaaac
ggtaacattttccgccgtctcgtacacctgaaattattagatttatcatggaatagaatt
caagaagttccaaaccttttgctgaaaaatcaaaataatcttcaaatattgaatattagt
aataatgaaatgctcacatttgacctaaattttgaacacatgaataatttgcaatacttg
aacctttctaaaaatcgtctatcgctattaagcaaacaaacccgaaaacagatagacagt
tgtaggagtcataatctaacagtgaacttatatggaaacaaactacaatgttcttgcgaa
acactggacttcctgaaatggcttggcgagaggaggaatacgttcgatgactttcatagc
tatgaatgccgattcccagacgagactaccgggaatttctcagattttgaaaatgttttg
ataagattaaagacatcatgtaacaaatataccggtctgatagtgggcaccacgtttggt
gtatgtctagccatctctctgaccctgtctggtatcgtgtatcgttatcgatggaagata
aggtatttatattatatgacgaaaacgaaatacagaggatatagcagtctggtgaccgac
tatgaggatagagatgaatatccttatgatgcctttgtatcgtactgcgaaaaagatggt
cgctttgttaggggtgacctcttgaataaccttgaacgacaaaatgggttgactctatgt
ttacaccagcgggactttataccaggacatgatatagctgaaaacattacaaaagccatt
caccagagcagaaaaacaattgtaatcgtatctaaaagctatctgaaatcctactggtgc
atgtacgaattcaacatggctcgaatggagagtatttatgcgagggaagggaattctgtt
ctgctgttagtgttctatgacaatgtagaaccgacagacctcccgctgacattgatggac
ctaatagacagtaagtcctatattgagtacccagacgacgagcaaggtaatgtggttttc
tggggaaaattggccgaatctatttccatgtaa
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