KEGG   Argopecten irradians (bay scallop): 138321157
Entry
138321157         CDS       T10542                                 
Name
(RefSeq) toll-like receptor 4 isoform X1
  KO
K10160  toll-like receptor 4
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr04145  Phagosome
airr04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:airr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138321157
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    138321157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:airr04131]
    138321157
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:airr04054]
    138321157
   04090 CD molecules [BR:airr04090]
    138321157
   00536 Glycosaminoglycan binding proteins [BR:airr00536]
    138321157
Membrane trafficking [BR:airr04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    138321157
Pattern recognition receptors [BR:airr04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   138321157
CD molecules [BR:airr04090]
 Proteins
  138321157
Glycosaminoglycan binding proteins [BR:airr00536]
 Hyaluronan
  Cell surface receptors
   138321157
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_5 ThsB_TIR H_lectin
Other DBs
NCBI-GeneID: 138321157
NCBI-ProteinID: XP_069120717
LinkDB
Position
4:27831820..27866737
AA seq 910 aa
MLPYKTPQRKQHDANRGRNMATMKFVVVVLAVVMMEAVNGYSGMQNHQHCVSDVRCRCNG
SEDTGLVADCSNLNISSIPKFYSNVTKILLQRNNIKHLKIEDRQFPRSVLYLDISENKLE
TFVDDPFRSMDSLVYLDLGNNLLKYMPNVFPRNVFKGLKSLSYLNLQGNNVLNTLHPDNL
SYPVSIGDIAMLTTCLLDGVDQTGFPSEFKDLLHLEVLDLGNEAATCELPILRSNYFENV
TSVRNLSLSYCQIRFIENGTFLKLTQLYFLNVSNNDRLTFGVMSNLTSDLKALPIHTLDI
SRIHCDYGPGTSIYVDDVVNLRNHTHLRRLYLNNNRLSLPEFGVISLLPKSLRFISANQN
RLTFGSYVFELAGFINLEYFDGSRQYTSHDPDTGSRDCKDWRAPPTYSNDFQAIPSILTN
LQDFSSSIQQMSSTKLVATNVSQVSRPNDSLTSTNSIVSSPPTFPVPGNLREVLFFGSVL
DYEIRVVPLGPNNLTRVDIHGNLLHSWSGTVLNIDKVKFIDGSNNYCTYISDNFFDHCEN
LEELLLHDNLLGNVLKTDENGNIFRRLVHLKLLDLSWNRIQEVPNLLLKNQNNLQILNIS
NNEMLTFDLNFEHMNNLQYLNLSKNRLSLLSKQTRKQIDSCRSHNLTVNLYGNKLQCSCE
TLDFLKWLGERRNTFDDFHSYECRFPDETTGNFSDFENVLIRLKTSCNKYTGLIVGTTFG
VCLAISLTLSGIVYRYRWKIRYLYYMTKTKYRGYSSLVTDYEDRDEYPYDAFVSYCEKDG
RFVRGDLLNNLERQNGLTLCLHQRDFIPGHDIAENITKAIHQSRKTIVIVSKSYLKSYWC
MYEFNMARMESIYAREGNSVLLLVFYDNVEPTDLPLTLMDLIDSKSYIEYPDDEQGNVVF
WGKLAESISM
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgctgccatataaaacgccgcaacgaaaacaacacgacgccaatcgaggccgtaatatg
gccacaatgaaatttgtcgttgttgttttggcagtggtgatgatggaggcagtgaatgga
tattctggtatgcaaaatcatcaacattgtgtatctgatgtaagatgtcgatgtaacggg
tctgaggataccggactggtagcagattgctcaaatctgaacatttccagtattccgaaa
ttctactcaaacgtcaccaagattttgttacagagaaacaatattaaacatctcaaaata
gaggacagacagtttccaagatctgttttgtacctggatatttcagaaaataaactggaa
acttttgttgacgatccatttaggagcatggattctttagtttacctggatctcggtaac
aatttattaaagtacatgccaaatgtttttccaaggaacgtattcaaaggattgaaaagt
ttatcatatctcaatttacaaggtaacaatgtgttaaatacattacatccagataatttg
tcatatccagtgagtataggagatattgcgatgcttacgacatgcctactggacggggta
gatcaaacaggatttccaagcgaattcaaggatctactacacctagaagtactagattta
ggtaatgaagcagcaacttgtgaattaccgatcttacgatctaattactttgagaacgtg
acatctgtgcgtaatctaagtttgtcttattgtcagattcgctttattgaaaacggaacg
ttcctcaagctcactcagttatactttttaaatgtatctaacaatgacagactaacattc
ggcgtgatgtcaaacttgacgagtgatttgaaggctttaccaatccataccctggatata
agtaggatccactgtgactatgggccaggaacttcgatatatgtagatgatgtcgtaaac
ttgagaaaccatacacaccttaggagattatacttaaacaataatagattgtcccttccg
gagtttggtgttatttcgttattaccaaaaagtttacgattcatttcggcaaaccagaac
agacttacttttggttcttacgtatttgagttagccggctttatcaatttggaatacttt
gacggtagtagacaatacacatcacatgatccagatactggttctagggattgcaaagac
tggagagctccaccaacttactcaaatgactttcaagcaattccatccatccttacaaac
ttgcaggatttctcatctagcatccagcagatgtcctccaccaaacttgtcgcaacaaat
gtgtcgcaagtatctagaccaaatgactccctgacatcaacaaattccatcgtatcttca
ccaccgacttttcctgttcccggtaaccttagagaggtgcttttctttggaagtgtgtta
gattatgaaataagagttgttcctcttgggccaaacaacttaacacgtgtcgacattcat
ggaaacttattgcattcatggagtggtacagtgctaaatattgacaaggttaagtttatt
gacgggtctaataactactgtacatatatatcagataatttctttgaccattgtgaaaac
ctagaagagctccttttacacgacaatctactgggaaatgttctgaagaccgatgaaaac
ggtaacattttccgccgtctcgtacacctgaaattattagatttatcatggaatagaatt
caagaagttccaaaccttttgctgaaaaatcaaaataatcttcaaatattgaatattagt
aataatgaaatgctcacatttgacctaaattttgaacacatgaataatttgcaatacttg
aacctttctaaaaatcgtctatcgctattaagcaaacaaacccgaaaacagatagacagt
tgtaggagtcataatctaacagtgaacttatatggaaacaaactacaatgttcttgcgaa
acactggacttcctgaaatggcttggcgagaggaggaatacgttcgatgactttcatagc
tatgaatgccgattcccagacgagactaccgggaatttctcagattttgaaaatgttttg
ataagattaaagacatcatgtaacaaatataccggtctgatagtgggcaccacgtttggt
gtatgtctagccatctctctgaccctgtctggtatcgtgtatcgttatcgatggaagata
aggtatttatattatatgacgaaaacgaaatacagaggatatagcagtctggtgaccgac
tatgaggatagagatgaatatccttatgatgcctttgtatcgtactgcgaaaaagatggt
cgctttgttaggggtgacctcttgaataaccttgaacgacaaaatgggttgactctatgt
ttacaccagcgggactttataccaggacatgatatagctgaaaacattacaaaagccatt
caccagagcagaaaaacaattgtaatcgtatctaaaagctatctgaaatcctactggtgc
atgtacgaattcaacatggctcgaatggagagtatttatgcgagggaagggaattctgtt
ctgctgttagtgttctatgacaatgtagaaccgacagacctcccgctgacattgatggac
ctaatagacagtaagtcctatattgagtacccagacgacgagcaaggtaatgtggttttc
tggggaaaattggccgaatctatttccatgtaa

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