Argopecten irradians (bay scallop): 138322730 Help Entry 138322730         CDS       T10542                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism airr  Argopecten irradians (bay scallop) Pathway airr03030   DNA replication airr03410   Base excision repair airr03420   Nucleotide excision repair airr03430   Mismatch repair Brite KEGG Orthology (KO) [BR:airr00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     138322730    03410 Base excision repair     138322730    03420 Nucleotide excision repair     138322730    03430 Mismatch repair     138322730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:airr03032]     138322730    03400 DNA repair and recombination proteins [BR:airr03400]     138322730 Enzymes [BR:airr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      138322730     6.5.1.6  DNA ligase (ATP or NAD+)      138322730     6.5.1.7  DNA ligase (ATP, ADP or GTP)      138322730 DNA replication proteins [BR:airr03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     138322730  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      138322730 DNA repair and recombination proteins [BR:airr03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      138322730    NER (nucleotide excision repair)     Other NER factors      138322730    MMR (mismatch excision repair)     Other MMR factors      138322730 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  138322730 NCBI-ProteinID:  XP_069122899 LinkDB All DBs Position 5:6466050..6525831 Genome browser AA seq 1061 aa AA seqDB search MQRSITAFFASPKVKTKAEEKAVEQKKEPKKSVPKKSPLKPKNSSPPKKDLDSPVKAANK KKSRARIIESDDDEEEEEENTKEPVAMETEDTDESEDVKKEESNESGEKKTDDKEEDSGG SSQSSSEITPASPVPKSPFGIPIRKTARKSMGSKRKTLNYSDEEKTPSKKSKSEDKETDE VPKTEKEEANVNDKLSEKSSGQKSSTLTKKKEKPKTDDEDMEMEDEHKETEKEEKDTKTT DSEVIEMECDDELSNTKKSTKGSTKTSPKSRKNSNKDKTPKEKKEKTPKVKKESKKRSPR SAKKGSVEQSHTENDKTKEKEEKTEEEEKVSVKTEPKTPVHSFFAPKKTTLTEEITENTK TDEKKEGKKEDIKEEAKEQAVKKEQTTKINPFSSKKEDNASYAPSKSRYHPVDDACWKHK EKVPYLALAKTFEAIEEISARLKIIDILCNFFRSVIALSPDDLLFCVYLCLNKLAPAYEG VELGIGETVLMKAIAQTTGRSMDKIKADAQEKGDLGIVAESSRSTQRTMFAPPKLTIRAV FNKLKEIAVMSGNNVMSKKIDIIKGLFVACRQSEARYLIRSLGGKLRIGLAEQSVLTALG NAVFLTPPGQDFPPEVLDAGKGLSSESLKKKMEESALVIKSVYCECPNYGSIISTLLKEG IEELPNHCKLTPGVPLKPMLAHPTKGVSEVLKRFENAEFTCEYKYDGERAQIHILENGTV NIYSRNSENNTSKYPDIIARIPNVMKDSVKSCVIDSEAVAWDAEKKQIQPFQVLSHRKRK DADASEIKIQVCVYAFDLLYLNGESLVKQPFKRRRELLRESFTEVEGEFVFAKSMISSDT EEIAVFLDESVKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGG YLGSGKRTGKYGGFLLACYEPDSEEFQSICKIGTGFKDDDLEQHATFFKEQVIDKPKQYY CWDSAHEPDHWFEPVQVWEVKCADLSISPTHRAASGIVDPEKGISLRFPRFLRIRDDKKP EDATSASQVADMYRNQDQIQNQQMTSETGKQGKEEDEEEFY NT seq 3186 nt NT seq  +upstreamnt  +downstreamnt atgcagcgatcgataacagcattttttgcatcaccgaaagtgaaaaccaaggcagaagaa aaggctgtagagcagaaaaaagaacccaaaaaaagtgttccaaagaagtcacctctcaag ccaaaaaattcatctccaccgaaaaaggatttggattctcctgtaaaagcagctaataaa aagaaaagtcgagctcggataattgagagtgatgatgacgaggaggaggaggaggaaaac accaaggaaccagttgccatggaaactgaggacacagatgaatcagaagatgtgaagaaa gaggaaagtaatgagagtggtgaaaagaagacagatgacaaagaagaagactctggaggt tcgtcacagtcctcttcagaaataacaccagcttccccagtgcctaaatcaccttttggg attcctatcaggaaaaccgctcgaaagtcaatgggcagcaaaagaaaaactctgaactac agtgatgaggaaaaaacaccttcaaaaaaaagtaaatcagaagataaggaaactgatgaa gtacccaaaactgaaaaggaggaggcaaatgtaaacgataaattgtcagaaaaatcgtct ggccaaaagtcatcaactttaacgaaaaagaaagaaaagcccaagacagatgatgaagac atggaaatggaagacgagcacaaagaaaccgagaaggaagaaaaagacacaaaaaccact gattcagaagttatagagatggagtgtgatgatgaattaagcaacaccaaaaaatccaca aaaggtagcacaaaaacatctcccaagagcagaaagaattctaacaaagacaagacccca aaggagaagaaggagaaaacacctaaagtgaaaaaggaaagtaagaaaagaagtccaaga tctgccaaaaaaggatcagtagagcaaagtcatacagaaaatgataaaacaaaagaaaaa gaagaaaagacagaagaagaggagaaagtgtctgtgaagacagaacctaaaactcctgtc cacagtttctttgctccaaagaaaactacactgacagaagagatcacagagaacacgaag acagatgaaaagaaagaaggaaagaaagaagacataaaggaggaagcaaaagaacaagca gttaaaaaagaacaaacaacaaaaataaacccattttcgagtaagaaggaagacaatgca tcctacgccccaagtaaatcccgctaccacccggttgatgatgcttgttggaaacacaaa gagaaggttccttatcttgctctagctaagacatttgaagcaatagaagaaatatcagca aggttgaagatcatcgatatcttgtgtaactttttccgttccgtaatcgccctcagccca gatgacctactattttgtgtgtatctctgcctcaataaactggccccagcctacgagggt gtggagctgggcattggggagactgtcctgatgaaggctattgctcagaccactgggaga agtatggacaagataaaagctgatgcccaggagaaaggtgaccttggtattgtggccgag tctagtcggagtacacagaggaccatgtttgctcctcctaaactcaccattcgggcagtg tttaataaactaaaggagatagcagtcatgtctggaaacaacgtgatgtccaaaaagatt gacatcatcaaggggttgtttgtagcgtgtcgacagtctgaggctcgttacctcatccgg tcgttaggaggcaaacttaggattggtctggcagaacagagtgtcctcacagctctgggc aatgcggtcttcctcaccccacctggtcaagatttccctccagaagttcttgatgctggc aaaggactttcatcagagagtttaaagaagaaaatggaggaatctgctctagttataaaa tcagtatattgtgagtgtcctaattatgggtccatcatatcaacattattaaaagaagga atagaggaactacctaatcactgtaaactcactccaggtgttccgttaaaaccaatgttg gcccatcctaccaaaggggtcagtgaggtgctaaagagatttgagaatgcagaattcacg tgtgaatacaaatacgacggagaacgagcacagattcatatactagagaatggtacagtg aatatttacagtagaaactcagagaacaacacaagtaaataccccgacatcattgctagg atacctaatgtaatgaaggactcggtcaaatcctgtgtcatagactccgaggctgtggcc tgggacgctgagaagaaacaaatacagcccttccaggttcttagtcatcggaaacgaaag gatgcagatgcctcagaaataaagatccaggtttgtgtatatgcctttgacctgctgtac ctaaacggtgaatcgttggtgaaacagcctttcaagagacgacgagaactgctgcgcgag tcattcactgaagtggaaggggagtttgtgtttgccaagtctatgatatcatcggataca gaagaaatagctgtcttcttagacgaatcagtcaaaggaaattgtgaaggactaatggtg aaaactttagatgtggatgctacatatgaaattgcaaagaggtctcacaactggttgaaa ctgaagaaagactacctggaaggcgtaggagacactctagatctagtggtcatcggaggc tacctagggtccggtaaaaggacggggaaatatggcggctttctgttggcctgttacgaa ccggacagtgaagagtttcagtcaatatgcaagattggtaccggatttaaagacgatgat ctggaacagcatgccacattctttaaggaacaagtgatagacaaacccaaacagtattac tgctgggatagcgcccacgagcctgaccattggttcgagccagtccaggtgtgggaggtc aaatgtgctgacctctccatatcacccactcacagagcagcatcaggcatagtcgatcct gagaaaggaatatcactgcgcttcccacgtttcctgagaatacgagacgacaagaagcca gaggatgctacctcggcctcacaggtggcagacatgtacagaaaccaggaccaaattcag aaccagcagatgacatcagaaacaggcaaacagggcaaggaggaagacgaggaagagttc tattga

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