Argopecten irradians (bay scallop): 138322766
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Entry
138322766 CDS
T10542
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr02010
ABC transporters
airr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138322766
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138322766
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138322766
Transporters [BR:
airr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138322766
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
138322766
NCBI-ProteinID:
XP_069122955
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All DBs
Position
5:7850451..7871034
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AA seq
1361 aa
AA seq
DB search
MLGMHWDSIYDSPMPGDDMSFAWCCLMMIIDGVIYLIIGWYLRTIRPGKHGISQPWYFPV
SPTFWGCSVSSPSSKYRAHQNEGLVEPMSNTLRVGMSVQGLSKSYGKTKAVKDLTADFYE
GQITVLLGHNGAAKTTTIKMMTGVLEPTRGEIYLHGRPINKTDKKIGICAQHETLFHYMT
VEEHMKFYGSVKSNLSSKELKYEREQLLKQVDMWHVRMVRVSELSGGMRRRLCVALAFVG
GSEIVILDEPTSGVDPNGRHAIWNLLLHKKAGCTILLSTHHLDEADMIGDRIAVMDSGRL
MCVGSPLYLKQRLGSGYHLKLTKLENCNLDNVLACLRTYIPEAGVIEDVGSEVTIKLPLP
SGNMERLYSALHNLDTHKDGLNVGSYGIFDTTLEEVFLKICAVAEKNVLLTDEVVQKASD
MQLSNEKFRISPENNQQRAPEMTRRSRVRVSTGSQKFQQFGALLTKRFHHYRRNWRMFLS
VVLFPVLFVAAALGLTLIKPNEIESPSLLLTPALYGPNSYAFYSDKAQTTHTQKISSHLW
SRPGMSTTCMPGMDFGSQFVCERADTMFSGSDSSQATYNAAQCTCNDYSYTCNSHANSIT
VPQIVTNTTEIIQYLGTHNVTEYLLKTYDTFKENRFGGFSFEAASDGTANTKATVWFNNK
GHHALPSYLNALSNSILRSRITQGDPAEYGITTYNHPILLNKQQLNKESLLQNAADIGIA
MVFLLAFTAIPVGFVTYVVSEHSNKEKQLQYVSGVGNFLYWVTSLFWDMLVFCLTVGLVV
IVMAIFRQNSYWARENLAGTVVLLLLYGWASIPWMYCTVKMFKDVTSAYMVLFCVNLFVG
ILLISFVFILNFFSSEEGIKNAYEVVRHVFLIFPAYSLCDGLIELTSNQVQSEILARFGQ
DTYVSPFSYDLLAYNYIAMAIAGFAFFVLLFFTEIRCPSRARVKNRIDDEIEESNEVRNE
KQRVLSHHARDDALVVSNMSKAYKRGRKSFLAVNHLSFGVPKGECFGLLGVNGAGKTTTF
RMLTGDILPSEGSATVNHKRVTRANPAIGQEVGYCPQEDALDGYLTGRELLHCHAKLRGM
PAENRNAVVEDLIVRLGLDFADRTVHTYSGGMKRKLSIAVALLGEPKVVFLDEPTTGMDP
VAKRLVWNCLMTCVKNQQAVVLTSHSMEECDALCTRLAIMVNGEFRCLGSPQILKNKYGD
GYTVTLFTNGLSTNTMALSAFTQSSFPGSIIRDQHQGILQLDIPQSNLSVANILERLEAA
KSTFSITHYSVSQTTLDNVFMSFVRDQNDGLSPEFDSYSSSSDSESVVTSEPFSSPGFNN
FAYSNVGFKGSKSDSIHVEGEPAGKYLPQTASIYPDLSTKL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtatgcactgggactcaatctatgacagtcctatgcctggtgatgatatgtcc
tttgcctggtgttgtctcatgatgatcatcgacggtgtcatctacctcatcatcggctgg
tatctcaggaccatcagacctggtaaacatggtatatcccagccgtggtatttccccgtg
tcaccgaccttctggggctgtagtgtcagctcaccaagctccaaatacagagctcaccaa
aatgaaggcttagtggagccaatgtccaatacactgagagttggaatgtcagtccaggga
ctctctaaatcttacggtaaaacaaaagcagtgaaggatctgactgctgatttctacgag
ggacagatcactgttctcctgggacataacggagctgctaaaactaccactataaaaatg
atgactggtgttttggagccgacacgaggagaaatatatctacatggtcgaccaatcaac
aaaacagataagaaaataggaatatgtgctcagcatgaaacactgttccattatatgaca
gtagaggaacatatgaagttttatggcagtgttaaatctaacttgtcatcaaaggaactc
aagtatgagagagaacagctgttgaaacaggtagatatgtggcatgtccgtatggtccgt
gtatccgagctgtccgggggaatgcgacgacgactttgtgtggccttggccttcgtggga
ggatccgagatagtgattttagacgagcccaccagtggtgttgatcctaatggccgacat
gccatctggaacctacttctgcacaagaaggctggttgtacaatactgttatctactcat
cacctggacgaggctgacatgattggagataggatagctgttatggacagtggacgtctg
atgtgtgtcggatcacctctctacctcaaacagagactggggagcggatatcacctgaaa
cttaccaaactggagaattgtaatctggacaatgtcctggcctgcctgagaacgtacatc
cctgaagctggagtgatagaagatgtgggatcagaggtgaccatcaagctgcccctgccc
tcagggaacatggagcgactttacagtgcccttcataaccttgacacacacaaggacggt
ctcaatgtaggaagctatggcatctttgacactacattagaagaggtatttttgaaaatc
tgtgctgtggcagagaagaatgttctattgacagatgaagttgtgcagaaagctagtgat
atgcagctcagcaatgaaaaattcagaatttctccagaaaataaccagcagagagcccca
gaaatgacgagacggtctcgtgtccgagtatctactggcagtcagaagttccaacagttt
ggagcgctgttgacaaagcgtttccatcactaccgtcgtaattggaggatgttcctgtct
gttgtactgttccccgtgctgtttgttgctgcggcccttggcctgacgctgatcaaacct
aacgagattgaatctccatccctactgctcactcctgctctgtacggtccaaacagctac
gccttctacagtgataaagcccagaccacacacactcagaagatctccagccacctctgg
tccaggccaggaatgagtacaacttgtatgccaggcatggacttcggatcccagtttgtg
tgtgagagagccgacactatgtttagtggcagtgatagcagtcaggcgacgtacaatgca
gcacaatgtacctgtaatgactacagttatacctgtaacagtcatgctaactccatcaca
gtaccacagatcgttaccaacactaccgaaatcattcagtaccttggcacgcacaatgtc
actgaatacctcctcaaaacttacgatactttcaaggagaacagatttggtgggttttca
tttgaggctgcatctgacggcacggctaacaccaaggccacggtctggttcaacaacaag
ggtcaccacgccctaccaagctaccttaatgctctgagtaactccattctaaggtcgagg
attacacaaggcgaccctgccgagtatggtatcaccacctataatcatccgatcttactg
aataaacagcaactcaacaaagaaagtctcctccagaatgcagcagacattggcatcgct
atggttttcctactagccttcacagccattcctgttggctttgttacctacgtcgtcagt
gaacacagcaataaggagaaacagctccagtatgtcagtggtgtcggaaacttcctctac
tgggttacctcccttttctgggatatgctggtgttctgtctaaccgttggacttgtggtg
attgtaatggctatcttcaggcagaactcgtactgggcgagggagaacctggctggaacc
gttgtcctcttactactatatggatgggcttccataccgtggatgtactgtactgtgaag
atgttcaaggatgtcacctcagcgtacatggtgctgttctgcgtgaacctctttgtcggc
attctactgatctctttcgtcttcatcctcaacttcttctcatcagaggagggtataaaa
aatgcctatgaggttgtgcgccatgtgttcctgattttcccggcgtatagcttgtgtgat
ggtctgattgagctgacatcaaaccaggttcagtcggagatcctggcccgatttggacag
gacacctatgtcagcccattctcctacgacctactggcctataactacatagccatggct
atcgcaggctttgccttctttgtccttctgttcttcacagaaatcagatgcccatctcgt
gcaagagtaaagaatcgtattgatgatgaaatagaggagagtaatgaagtaagaaatgag
aaacagcgtgtcttgtctcatcatgcccgtgacgatgccctcgtggtcagcaatatgtcc
aaggcttacaagagaggacgtaagagtttcctggctgtcaaccatctgtcgtttggtgta
cccaaaggggagtgtttcggattacttggtgtgaatggagcaggaaagacgaccacattt
agaatgttgactggtgatattctccccagtgaaggctcggccactgtcaaccataagagg
gttacgagggccaacccagccattggacaagaagtgggttactgtccacaagaggatgcc
ttagatggttatctgacgggccgagaacttctccactgtcatgctaagctgaggggcatg
cctgcagaaaacaggaacgcggtggttgaggacctaatcgtcagactcggtctggacttt
gctgaccgtactgtccatacctacagtggaggcatgaagaggaaactgtctatagctgtg
gcactcctcggagaacccaaagtggtattcctggatgagcctaccacagggatggatcct
gttgctaagcgacttgtatggaactgtttgatgacttgtgtcaagaaccagcaggcagta
gtcctcacctcacatagtatggaggaatgcgacgccctgtgtacacgactagccatcatg
gtcaatggagagttccgttgtcttggttcaccacagatactcaaaaacaaatacggagat
gggtacactgtgacactgttcaccaacggcctatccaccaatacaatggctctgtctgcg
ttcacacagtcctcattccccggctccattatcagggaccagcaccagggtatcctccag
ttggacattccacaatctaacctgtcggtggctaatatcctggagcgactagaagcagcc
aagagtacctttagtattactcactactctgtatcccagactactctcgacaatgtgttc
atgagttttgtgagagaccagaatgatggactgtcacccgagtttgatagctactccagc
agtagtgatagtgaaagtgttgtaacaagtgaaccattctcctctcctggttttaataac
ttcgcctactctaacgtgggctttaaaggcagtaagtcggacagcatacatgtagaagga
gaacctgctgggaaatatctaccccaaacagcatctatctaccccgacctatcaacgaaa
ctctag
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