Argopecten irradians (bay scallop): 138322936
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Entry
138322936 CDS
T10542
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
airr Argopecten irradians (bay scallop)
Brite
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
138322936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138322936
NCBI-ProteinID:
XP_069123287
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Position
5:complement(13997529..14029593)
Genome browser
AA seq
1858 aa
AA seq
DB search
MDLLFDWDNEGDRYSFEDSDRFEEDSLCSWISEPESLCNNWRGWKRQNGGQASTIVKNQE
SDGPVKPLVELAAMAVACNIPFEEVEMFPQPIPEQLQLRIAFWSFPENEEDIRLYSCLAN
GSADEFQKGEHLYKFKAVKDALQIGFHLSATVIPPQGIVQAKGNFNVAVVFDRRRISSCT
CTCNSAASWCSHVVALCLYRIHQCNAVCLRAPVSESLSRLHRDQLQKFAQYLISELPQQI
LPTAQRLLDELLSSQETAINTVCGAPDPTAGPSANEQTSWCLDENTLHENIKKTLVKFCV
PSPIVFSDVNYLSATAPPAAAEWQSLLRPLRGREPEGMWNLLSIVREMFRRNDSNAIPLL
EIITDEVLQCEQILIWWFTTKTTANNNNMCRGNGSGGANITQHAAASLCEEIVTLWRLAA
LNPKLSPVQRNDLSVKFKEWHLSTVEKVRKARGVSINNTGNGLKKNEIENFIGFKPGIEA
CSLAWDDYPIPGVTYSEKDGSCFKYRFNKSHDSDKKPSRIQPVTVCSESIISTDNTTTLA
QAQNMLQEQHQNAQDLANYNSRRHGHSSPRGSNTNDGAISSGSEGFCEPERSSSLYRDSD
SGSEMKEVNSRSNSIDDQEGFPGHASLPNSYGIGNRSEGASNFSVFSSDKSGDVFHACDN
AQDNSTFVMSAADTQASGSARAEHSSESQQSGDEYHVYFCAKNKAADADKQKKDKTDEPN
FFAGVKNMDQTQDVLFARAEALHAHGHTKEACRLAQRLAEEMLANPCDLLAETANLPSIK
GKKKKALTNISLMASSTLSKAAFLSSVLAEEHECFHLAFKVGMFGLELPRPPASCKALEV
KLAYQETELLNLLKKIPLGPAEVNVLRDKAEQLRDRTIKSRGDALLPLTLASFIFDSLCL
PVFPLGSTNSRPPSRSVQISIARSPGDEKLGFEGAVAALGMKANVSEADHPLLCESTRRQ
RGELAITMLVHYKDDQVKLSKIMDKLLDKEVHQLYKAPSLVNYLGSKSPSAPPAAPIPAV
HPTPTTGQSVPQASTSQAGCSNVSQPQQQSSEASGQAASARTVSNTMVTSTSGARPKLTY
PLRYNSGKDTDSSAVEEEEELKALEAKLRCMSMKKKPSQGMASIDSSAPETTSSDNSPTM
VRRTWKHQGPGSDCGSSGDSSDSIGSSSSGDKDARNKLRENESPPSPLGARFMPSQLMES
RILTPGMANVKNPRYKGKARIMPTVPNQPSEASAHFMFELSKTVLTKAGGNSSTSLFTQP
SNTNTHTGPHRNLHLCAFQIGLYALGLNNCVSPNWLSRTYSSHVSWITGQAMEIGSAAIN
MLIDTWEGHLTPAEVASLADRASRGRDPNMIRAAAELALSCLPNAQALNPSEVQRALIQC
KEQSREMLQRACLAVESAAKGGGVYPEVLFDVARQWFELSEEAAKSSHNHSSIETAPLNH
AASESNDAGVPPAAVVTAASVAGAPLPTDRRSPSSLSVIPFSSTPPHSCNQVTLTNTPQM
MPRAVNSQIPTQPVVLSYAIPQANPHHPQLPHHHQYVQHYGYVQQIQPFGHQYTAHQPIP
MQNPNLHHFVPAFTYQNQPHFNNMQGIPTPASMYPASAAPPFRALTPAVQVFPSHAQCHP
PAVQQIPTSSAGSVQPSHPIEVASDGSSQSPSPPQSAAAIQGQHNGQHTTTNQVQFNYLM
AAFRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLNIAIKLGTNYLQQFCASAVN
AVVSPFVLYDIYVEGAHILARNNPSIPQGHLRPNNILNPLVQKCLQMFIQCAHQRIHHIN
PSEYDDFINTICSARNAFCLTPGGMVQFQEFLQSLRRTKSCRKDLWARIVNGLATGNV
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctttttgactgggataatgaaggggataggtattctttcgaagacagtgat
cgatttgaagaagattcattgtgttcgtggataagcgagcccgaaagtctttgtaataat
tggagaggatggaaaagacaaaatggaggtcaagcttcgacaattgttaaaaaccaggaa
tctgatggaccagttaagcctttggtggaattggcagccatggctgtggcctgcaatata
ccatttgaggaagtggagatgttccctcagcctatcccagaacaacttcaactcaggata
gccttttggagtttcccagagaatgaagaggatataaggctgtactcctgcctagctaat
ggtagtgcagatgagttccagaaaggagaacacctttataaatttaaggcagtcaaagat
gctctacagattggtttccatctgagtgccactgtaatcccacctcaaggtatagtgcag
gctaaaggaaacttcaatgtggctgttgtatttgacagacggcgtatatcatcctgtact
tgtacatgtaacagtgcagcatcctggtgttcacatgtagtagcactgtgtttatataga
atccatcagtgcaacgcagtttgtctgagggcccctgtatctgaatcattgtctaggctg
cacagagatcagctacagaaatttgctcaatatctcatcagtgagctgccacaacagatt
ttaccaactgcccagagactgctagatgaattgttgtcatctcaggaaaccgccataaac
actgtctgtggtgccccagatcctactgctgggccatctgcaaatgaacagacatcatgg
tgtttggacgagaacactctacatgaaaacatcaagaaaactcttgtgaaattctgtgtt
ccatctcccattgttttcagtgatgttaactacctgtcagccactgctccaccagcagct
gctgagtggcagagtctacttaggccactgagaggaagagaaccagagggcatgtggaat
ctgctctcaatcgtcagagaaatgttcagaaggaatgacagtaacgccattcctctgttg
gagatcatcacggatgaggtcttacaatgtgaacagatcctgatctggtggttcaccacc
aagacaacagccaacaacaacaacatgtgtagaggcaatggaagtggtggtgctaacatc
acacagcatgctgccgcaagtctgtgtgaggaaatagtgacactctggagattagctgcc
ctcaatcccaaactctctccagttcaacggaacgacctcagtgtaaagttcaaggagtgg
catctgtccacagtggagaaagtgaggaaggctagaggagtcagtatcaacaacacagga
aacggtctcaagaaaaatgaaatagaaaactttattgggtttaagcctggtatagaggca
tgtagtttagcttgggatgactatccaattcctggtgtgacatattcagaaaaggacggt
tcttgtttcaagtataggttcaacaaatcccatgacagtgataagaagccgtcaaggatt
cagccagtcacagtatgttcagaaagtattatcagtactgacaatacaactacacttgct
caagcacaaaacatgttacaggagcaacatcaaaatgctcaggacttagcaaactacaac
agcagacgacacggtcattctagtcccagaggctccaacacaaatgatggtgccattagc
tctggttcagagggtttctgtgaaccagaaagaagtagttctctgtacagagattctgac
tcaggatcagaaatgaaagaagtgaattccagaagtaattctatagatgatcaagaaggt
tttcctggtcacgcttctctccctaatagttatggcattggaaatagatcagaaggtgcc
tctaatttctcagtattttcatcagacaagtctggagatgtgttccatgcttgtgacaat
gctcaggataattctacttttgtgatgtctgctgcagacacacaggcttctggatctgcc
agggctgaacactcgtcagagtcccaacagtctggagatgaatatcatgtgtatttctgt
gctaagaacaaagcagcagatgcagacaagcagaaaaaggataaaacagatgaacccaat
ttctttgctggagtgaagaatatggatcaaacgcaagatgtcctctttgctagagctgag
gccctgcatgctcatggtcatacaaaggaagcttgtcgcttagcccagagacttgctgag
gaaatgttagcaaatccttgtgatctgttagctgaaacagcaaatctccctagcattaaa
ggtaagaagaagaaagcgctgaccaacatcagtctgatggccagttccacactatccaag
gctgccttcttgtccagtgtgttggcagaggagcacgaatgtttccatctggccttcaaa
gtgggcatgtttggactggaactccccagaccaccagcttcctgtaaagcactggaggta
aaactagcatatcaggaaacagagttgctgaatctgctgaagaagataccacttggtcca
gcagaagtgaatgtgctgagagacaaggcagaacaacttcgtgacagaactattaaatct
cgtggtgatgctcttctgccgctcactctagccagctttatatttgattccctctgcctg
ccagtattccctttaggtagcaccaacagcagacctcccagtaggtcggtacagatcagt
atagccaggtcaccaggagatgagaagcttgggtttgaaggagctgtcgcagcactaggt
atgaaagccaatgtatcggaggcagatcacccacttttgtgtgagagcacaaggagacag
cgaggagaactagccatcacaatgttggtccattacaaagatgatcaggtcaagcttagc
aagatcatggataagctgctggacaaggaagttcatcagctgtacaaagctcctagtcta
gttaactacctgggtagtaagtctccctccgctccacctgctgcaccaatcccagccgtt
catcctacccccaccaccggtcagtctgtacctcaggcctccacatcacaggccggctgt
tcaaatgttagtcagccacaacaacaaagttctgaggccagtggtcaagcagcttcagca
aggacagtatccaacacaatggtgacatctacatcaggtgctaggccaaaactcacatac
cctcttaggtataacagtgggaaggatacagacagttctgcagtagaggaggaagaagaa
cttaaagctctggaagccaaattaagatgtatgagtatgaagaaaaaaccttcacaaggt
atggctagtattgatagtagtgcgcctgagacaacatccagtgacaactctcccactatg
gtgagacgtacgtggaaacaccaggggccaggcagtgactgtggcagttcaggggacagc
agtgattctatcggatccagtagctcaggggacaaggacgccaggaacaaactcagagaa
aatgaaagcccacccagtcctttaggtgccagattcatgccatcccaactgatggaatct
agaatccttactccaggaatggccaatgttaaaaatcctaggtacaaagggaaggctcgt
ataatgccaacagtacccaaccagccaagtgaggcttcagcacattttatgtttgagttg
tcaaagacagttttaacaaaggcaggtggtaatagctccacatcgttgtttacacagcct
agcaataccaatacccatacaggtccccacagaaacctccatctctgtgccttccagatc
ggcctgtatgccttaggtctcaacaactgtgtatctcctaactggctgtcacggacttac
tcttcacatgtgtcctggatcacaggacaagctatggaaattggaagtgcagccatcaac
atgctgatagatacatgggagggccacctcacaccggctgaagttgcttccttggctgat
agagcttccagaggtcgtgatccaaacatgatcagggcagcagcagaactagctctgtcc
tgtctgcctaatgcacaggctctgaatccatcagaggtccagcgggccctgatccaatgt
aaggagcagagcagggagatgttacagagagcttgtttggccgtcgaaagtgcagccaag
ggcggtggtgtgtatccagaagttttgtttgatgttgccagacaatggtttgaattgtca
gaagaggctgcaaagtctagtcataatcattcatctatagagactgcaccccttaatcat
gctgcatcagaatctaatgacgctggtgttccacctgcggcagttgtgactgctgcgagt
gtggccggggctccactgcctaccgacaggaggagtccgtcctcgctgtcagtcattcca
ttcagctccacccctccacattcgtgtaatcaagtgacactgacaaacacaccacagatg
atgcctcgcgctgtcaatagtcagattcctactcagcctgttgtgctgtcctatgccatt
cctcaagcaaaccctcaccatccacagctacctcatcaccaccagtatgttcaacattac
ggatatgttcaacagatacagccattcggacatcagtacaccgcgcatcagcctatcccc
atgcagaaccccaaccttcatcattttgtacctgcattcacatatcaaaatcagcctcac
ttcaataacatgcaaggaataccaactcctgccagtatgtatcctgccagtgcagcacca
ccattccgggccctcactcctgctgtacaagtgttccctagtcatgcacagtgtcatcct
cctgctgtccagcagattcccacatcctcagcaggatctgttcagccttcacatcctata
gaggtagcatctgatggctcctctcagtctcctagtccgccccagtctgctgctgccatc
cagggacaacacaatggtcaacatacgaccaccaatcaggtccagtttaactatctgatg
gctgccttccgtgttggtatgttagctcttgaaacattagcaaggcgtgtacatgatgac
cgaccacaggcgaagtatgcccgcaacccaccctatggggaggatgtcaaatggctcctt
aatatagctatcaaattaggtacaaattatctccaacagttttgtgccagtgcagtgaat
gcagtggtcagtccatttgttttatatgacatctacgttgaaggtgctcacatcttggcc
aggaacaatccgtctattccacaaggtcatctgagaccaaataatatactcaaccctctg
gtccaaaaatgtcttcaaatgttcatccaatgtgctcaccagcgtatacaccatatcaac
ccttctgagtatgacgatttcataaacaccatctgcagtgccagaaatgccttttgtctc
acaccaggaggtatggtccaatttcaagagtttctacaaagtctacgcaggaccaagtcg
tgccgtaaggatctctgggcaaggatagtcaatggcctagccactggaaacgtttga
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integrated database retrieval system
