Argopecten irradians (bay scallop): 138322970
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Entry
138322970 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7-like
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138322970
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138322970
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138322970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
zf-TRAF
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_SPT8
zf-C3HC4
WD40_like
Beta-prop_IFT140_2nd
zf-C3HC4_4
NBCH_WD40
zf-C3HC4_2
zf-RING_5
Prok-RING_4
zf-C3HC4_3
zf-RING_6
Beta-prop_Nup120_160
Sina_ZnF
Zn_ribbon_ACC
DUF1664
CPSF_A
RmuC
Laminin_II
Apolipoprotein
TPR_MLP1_2
TolA_bind_tri
Lebercilin
HMMR_N
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
138322970
NCBI-ProteinID:
XP_069123349
LinkDB
All DBs
Position
5:15058338..15103939
Genome browser
AA seq
609 aa
AA seq
DB search
MVYEETDKYDSAISQGASRGVSSPTFQRSDTLLVVPHQHKRTNSNVSRISALSSAEEEEI
TVFVEPPNKKLYCRLCQTVFKEPVIVACGHTYCHRCVTANPEAACPVDGKSLDIIVANIT
LSEQIGDLFIHCKYGCSLSLDGLGYVVDSNKCPVQCRITNRSEHEDNCDFMPMECPNNSG
CPAILKKDLEDHLKTCNRARCTHQRFGCEFMGVHDELDEHLKVCKFEGMKEYIHRTEEKM
SDMQYSLNQKDQDVGFLRSMLGKLAERLENMEKQTEDRVEHLEHRLGDVVEELVSVKRDN
TLLQDDLEQVKNVLSSRSLPYAPYDPLQMFKCRGTFVGHQGPVWCLCVNNDFLFSGSSDK
TIKVWDTGNNYKCLKTLEGHTGIVLAICTYGNKLYSGSQDSNIIVWNIDNFEQVTVIDAH
CNPVCTLASTKSLLFSGSLKVIKVWDVHTNELKQELTGLNHWVRALVATQNHLYSGSYQT
IRIWDLETLECLQMLETSGGSVYSIAITNYHILCGTYENVIHVWELESKNQIVTLKGHTG
TVYALAELQTSSGTKIFSASYDRSLRVWSMDNMICTQTLLRHQGSVACLAQSRGRIFSGA
VDSTVKVWQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatgaagaaactgataaatatgactctgccatctcacaaggagcttcccggggt
gtgtcaagtcctacctttcagagatcagacaccttgttagttgtaccccaccaacataaa
cgaacaaattccaatgtttctaggatatctgccctcagttctgctgaagaggaggaaatc
actgtgtttgttgagccacccaacaagaagctgtactgtagactatgccaaacagtgttc
aaagagccagtgattgtggcatgtgggcatacctactgtcatcgatgtgtcactgcaaac
cctgaagctgcctgtccagtggatgggaagtccttggatattatagtggccaacatcaca
ctgtcagagcagatcggggatctgtttatccactgtaaatatggatgttctttatcactg
gatggtctgggctatgtggtggactccaacaagtgtccagtacagtgtcgcatcacaaac
aggagtgaacatgaggataattgtgactttatgcccatggagtgtcccaacaacagtgga
tgtcctgctattcttaaaaaggatttggaggaccatttaaaaacatgtaacagagctcgc
tgtacacatcaaagatttggatgtgagttcatgggtgtgcatgatgaattagatgaacat
ttaaaagtgtgtaagtttgaaggaatgaaagagtatatccatcgtacggaagaaaaaatg
tcagatatgcaatattcactgaaccaaaaggaccaggatgtgggatttctgcgttctatg
ttagggaagttagcagaaagactagagaacatggaaaaacaaacagaagacagagtggag
catcttgaacacaggcttggagatgtggtagaggaactggtcagtgtcaaacgagataat
actttgttacaggatgatttagagcaagtaaagaatgtgcttagctccagaagtcttcca
tatgcaccttacgatcctctccagatgttcaagtgtagagggacgtttgttgggcatcag
ggaccagtttggtgtttgtgtgtcaataatgacttcctgttcagtggatcttcagataag
acgataaaggtatgggacacaggcaataactacaaatgtctgaagacgttagaaggtcac
acaggtattgtcttagccatctgtacctatggcaacaaattatacagtggctcacaggac
agtaatatcattgtgtggaacattgataactttgaacaagtgactgtgatagatgcccac
tgtaatcccgtctgtacgctggcctccactaaaagtttgctcttcagcggctccctcaag
gtcatcaaggtatgggatgtacacactaatgagttgaaacaggaactgacaggactgaac
cactgggtgcgggcgctcgtggctactcagaaccacctgtacagtggctcatatcagacc
atccggatctgggatctggagacgttagagtgcctacagatgctggagacatctggtggt
agtgtatacagtatagctatcacaaactatcacatcctgtgtggaacatacgaaaatgtc
atacacgtatgggagcttgaatcaaaaaatcagattgttactttaaaaggacatactggt
acagtttacgctctggccgagctacagacatcctccgggacaaagatattcagtgcatcg
tacgacagatcattgagggtttggagcatggacaacatgatctgtacccaaacattacta
aggcaccagggtagtgtcgcctgcctggctcagtctcggggcaggattttctcaggtgct
gtggacagtaccgtcaaggtatggcaatag
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