Argopecten irradians (bay scallop): 138323121
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Entry
138323121 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138323121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138323121
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138323121
Spliceosome [BR:
airr03041
]
Complex A
U2 snRNP components
U2 related factors
138323121
Complex B
138323121
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
138323121
NCBI-ProteinID:
XP_069123596
LinkDB
All DBs
Position
5:18992965..19009254
Genome browser
AA seq
1025 aa
AA seq
DB search
MPRDSRSYRKRSRSRSGSRERKRYRSRSKSPDRSRRSRSRDRSRRSRSRDRDRDRERDRD
RSKRSRSRDRDRRRSRSRDRRRSRSRDRDRRRRSRSRDRDRDRRSRSRDRKRDKRSRSKT
PDKSKTKDTSPERKLTYREGELSLRDEPLDKEEEQKRLEMEMQKRRERIEHWRAERKKTK
ELAPINIAPPTKIWSLEDDDDDDDIVDNGSKDDDDELDPLDAYMQNIDEKSKSEKEQTTG
IKSENGSNTDTASGKVTMITGVVKTKTDTSLQKGELMLNNVDAMEYSSEEEEEDLDSTMA
KIKNSKKELLVVDHTRIYYASFRKDFYVEVPEIKKMTNEEVDAYRAELEDIKVRGKNCPK
PIKSWAQCGCSKKIMDAFKRHDYEKPTPIQAQAIPAIMSGKDLIGIAKTGSGKTLAFLIP
MFRHIKDQPELDEDDGPVAVVMTPTRELAMQITTECKKFAKPLGLRAVCVYGGTGISEQI
AELKRGCEIIVCTPGRMIDMLSANNGRVTNLRRCTYIVLDEADRMFDMGFEPQVMKIVDN
IRPDRQTVMFSATFPRQMEALARKILNKPIEVQVGGRSVVCKDVEQHVIVIDEDKKFLKL
LELLGIYQEKGSVLVFVDKQEHADDLMKDLMKHSYPCLSLHGAIDQYDRDSTISDFKSGN
ISLLVATSVAARGLDVRHLILVVNYDCTNHYEDYVHRCGRTGRAGNSGFAYTFITPEQER
YAGDILKALEMSGANVPADLERLWNDYKERAKAEGRTVKSSSGFKGKGFKFDETEAHLAD
ERKKAQKAALGLQDSDDEDTSLDIDQQIEDMFASVKRVTDVAKPIVPTQTPQPIVAAPTV
SNQQKLELAKRLAAKINMQKKIGPDAQDITQQAAKSIMTGDGAAPQVASKTIAEQMAEKI
NAKLGYRPQTEDEDGADSNAETFKRYEEELEINDFPQTARWKVTSKEALAQICEYSEAGI
TVRGTYFLPGKEVKEGERKLYLAIEATSDMAIQKAKKEITRLIKEELIRLQTSYQPLNKG
RYKVV
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggacagcagatcatacagaaaaaggtccagatcaagaagtggatcaagagaa
aggaaacgatacagaagtaggtcaaaaagtcctgaccgttctcggaggtcaagatcaagg
gacagatcaagacggtcgaggtcaagggatagagatagagatcgagagagagatagagac
aggtctaagagatcaagatctcgtgacagagacagacgaaggtcaagatcaagagacaga
agaagatcaaggagtcgagatagagataggagaaggaggtcaagatcacgtgatagggac
agagatcggcggtctcgttcaagagatcgaaagagagacaaaagatcacgatccaaaaca
cctgataaatctaaaacaaaggatacatcaccagaaaggaagttaacttatagagaagga
gaactaagtttgagagatgaacctctggacaaggaagaggaacagaagaggctcgagatg
gaaatgcagaaacggagagaaaggattgaacattggagagcagagaggaaaaaaacaaaa
gagctagcccctataaacattgctcccccaacaaagatttggagtttagaggatgacgat
gatgatgacgatattgttgataatgggtcaaaagatgacgatgatgaattagatcctttg
gatgcctatatgcagaatattgacgagaaatccaaaagtgagaaggagcagacaactggc
attaaatcagaaaatggttcaaatactgatactgccagtggtaaggtgaccatgataaca
ggagtggtgaaaactaaaacggacacatcactacagaagggagagctcatgttaaacaac
gtggacgccatggagtattcatcagaagaggaagaagaggatttggactcgactatggca
aaaattaaaaacagtaaaaaggaactactggtggttgatcatacgagaatatactacgct
tcgttcagaaaggacttctatgtagaagttccagaaatcaaaaaaatgacaaatgaagag
gttgatgcctacagagctgaattggaagacatcaaagttcgtggtaaaaactgtccaaag
ccaatcaagtcctgggcacagtgtggctgtagcaaaaaaatcatggatgcttttaagaga
catgattatgaaaaaccaacgccaatccaagcacaagccatccctgccattatgagtggg
aaggacctgatcggtatcgccaaaacaggcagtggtaaaactctggctttcctcatacct
atgttccgacatataaaggaccagcctgaactagacgaggatgatggacctgttgctgtg
gttatgacccctaccagagaacttgccatgcagattaccactgagtgtaagaagtttgcc
aaaccgctgggcctgcgtgccgtgtgtgtgtacggtggaactgggatctcggaacaaatt
gcagaactcaagcgtggctgtgagatcatcgtgtgtactcctggtcgcatgattgacatg
ttgtcagccaataatggtcgagtgacaaaccttagaagatgtacttacattgtacttgat
gaagctgaccgtatgtttgacatggggtttgagcctcaggttatgaaaattgtggataat
attcgacctgatcgccagacagtgatgttttcagcaacctttccaaggcagatggaggct
ttagccagaaaaattcttaacaaaccaatcgaggttcaagtcggaggtcgcagcgtggtt
tgtaaggatgtggaacaacatgtaatagtcatcgacgaggacaaaaagtttctcaagctg
ctggagctgctgggtatctaccaggagaaaggcagtgttctggtgtttgtagataaacaa
gagcatgcagacgatctgatgaaggatctgatgaaacactcgtacccctgtctctccctc
cacggtgccattgatcagtacgatcgagacagcaccatcagtgacttcaagagtggaaac
attagtctcctggttgcaacatctgtggcagctcgaggtttagatgtacgacacctgatt
ctggttgttaattatgactgtaccaaccactacgaagattacgtacacagatgtgggcga
actggaagagcaggtaacagtggctttgcctacaccttcatcacaccggagcaggagcgg
tatgctggtgacatcctgaaggcattagagatgtcaggtgctaatgtgcctgcagatcta
gaacgtctgtggaatgactacaaggaacgggctaaggctgagggaagaacagtgaagagt
tcaagtggatttaagggtaaagggttcaaatttgacgagacagaggctcatttagcagac
gagaggaagaaggcacagaaggcagcacttggtctgcaggattctgatgatgaggacaca
agtttagatattgaccaacagatagaagacatgtttgccagtgttaagcgggtcactgat
gttgctaagcctatagtacccacccagacaccacagccaatcgtagcggcaccaaccgtc
tctaaccaacagaagctggagctggcgaaacgtctggcagctaagatcaacatgcagaag
aagatcggacctgatgcacaggacatcactcagcaggcggccaaatccataatgacggga
gacggagccgcaccacaagtggcttcgaagacaatagcagaacagatggcagagaagatt
aacgccaagctgggctaccgaccacagacagaggacgaggacggcgctgacagtaacgct
gaaacattcaaacgttatgaggaggagttagagatcaatgacttccctcagacagctcgc
tggaaggtcacctcaaaggaggccctggcccagatctgcgagtactcggaggccggtatc
acggtgagagggacatacttcctgcctggtaaggaggtgaaggagggagagaggaagtta
tacctggctatagaggccactagtgatatggccattcagaaggcaaagaaggagatcact
cgtctcatcaaggaggagctcatcagactgcaaacatcgtaccaaccacttaataaagga
cgctacaaggtcgtgtag
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integrated database retrieval system
