Argopecten irradians (bay scallop): 138323234
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Entry
138323234 CDS
T10542
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
airr Argopecten irradians (bay scallop)
Brite
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138323234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138323234
NCBI-ProteinID:
XP_069123766
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Position
5:complement(22335785..22373637)
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AA seq
1837 aa
AA seq
DB search
MSTRLDRLFLLLDTGSTPLIRKSAAEQLGEVQKLHPYELNNLLSKVHGYLRSPNWETRIA
AGQAVEAIARNVPKWEAKLVPKQEPNNDPSCTQSPGQLLFAQFDLNKVLNYGASLVGSEE
KMYEMDNGTNQLTDKDQLTRQRQMLNKRLGLDVAGNLGLGIGSDIFTDDDLIMGIKSSNG
VSTEDQKSVSDIVKQQLLLVTGGMSAREKNRVKRKAKILAKQRSKECQSEQMTLETEPPC
KKAKSRNDLDLGSDGKLVMESSIDNTLNMEEVEEWPFETFCELLMNDLFQSTWESRHGAA
TGLREVVKLHGQSAGMSVDTPSDQVKTMNQVWLSDLALRLVCVIALDRFGDYVSDEVVAP
VRETCAQTLGVVVRCLETWGVEGVVNILLQLLAQKQWEVRHGGLLGFKYLLAIRKDMTDR
LLPIVLPCLFHGLQDDSDDVRAVAAAALVPVADSVVSLLPGQVPLIVATLWQTLLDLDDL
TSSTNSIMTLLSTIMSHPRASVLDWLTTPLTELVPRLWPFLRHNIASVRKSALQTFSTLL
DIESVQHPTNIWLPLILQDALRHLIQRSLLEERQDVLVMVGQVWSKLLSKSPIDHLIAMA
TPWLGVWLSLCMQPSKVPFEPAYLIQAKHRGRVEVGRHKASVGAEKEQQDYIAGTNTLNS
DVQERDTAVMKARMHTSRLIGILCSYITRDVPNFPPEAEKPVNSLCKLFLFHMNNKSAIQ
RFIVGQVLYYWASVQQNSPCTSETKSKLLECLNEAIYFDEIAASFTHMQSDCQNFIAGLK
QQAIDMDSIIPPGSILSVEQASALTTSVYDQVKITLKPNYLQTFEDRRKQLRTIVEQTTQ
ELQTLTIRVQVSLAKAVVMLDILPDKLNPVVRPLMDCIKKESNTSIQREAGDCLLFLIQK
CIGRNPTPNNKVVKNLCGFLCGDPSYTPKINSPAPPTSEATSSNEVLCSKHTGILTLTKQ
QRVPDTGKKWLRRTPSVKVDVDIPADVTQESAEVQRQLNIQRRGADLSLNVITRQLGDQL
PQSVPQFWETLSQPLSQVPAGDDIEWTLTEEGAEELVHSLQVLECVCASLDSNLVSQIIQ
KLPNMLTCLQCSYTAVRHMAARCVGALSRVVTADLMTFCFENVIPFLGASDKEPQRQGAV
EALSHVIDQMGVDLLPYIVLMVVPILGRMSDQNDAVRLLATNSFASLIRLLPLEASIPDP
PEMNPRLAAKKEEQRKFLEQLMDGSKVESYKVSVPVDADLRKYQQDGVNWLAFLNKYSLH
GILCDDMGLGKTLQSICILASDHFLRDQKYKKNKIPDCAPLPSIVICPPTLIGHWVYEVQ
KFLDQQYLNPLMYAGPPSERVRLQKRVKKHNLIVASYDVVRNDVDFFSTINWNYCILDEG
HIIKNGKTKLSKAVKQLNCNHRLVLTGTPIQNNVLDLWSLFDFLMPGFLGTEKQFQARYG
KPILQSRDAKSTSKEQEAGALAMESLHRQVLPFILRRLKEDVLQDLPPKIIQDYYCDLSS
LQVELYEDFAKSQAKKGVEDMVTSLKVESPEKKVPSRGSTHVFQALQYLRKVCNHPSLVL
VPTHPKYEQITSQLKKQNSNLRDIQHAPKLNALRQLLMDCGIGVDQSMPASGQQQVTSNM
PVVNQHRVLLFCQLKGMLDIVEKDLLKTHMPGVTYLRLDGSIPAGSRHNIVNRFNNDPSI
DLLLLTTHVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLVTRGT
LEEKIMGLQKFKMTIANTVISQENSSLQTMGTDQLLDLFSLDDEKKGQSSAGSNQSESGS
SKKETVSSMLENLGDLWDEDQYDSEYDMKNFLNSLAT
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaggttagatagattgtttctcctccttgacacaggctcgacaccacttatc
aggaagtcagctgctgaacagcttggggaagttcagaaactccatccgtatgaactcaac
aatcttctatcaaaggtacatggctacctacgaagtccgaactgggagacaagaatagct
gctggacaagcagttgaagcaattgctcgaaatgttcccaagtgggaggccaaattagtc
cctaaacaagagccaaacaatgaccccagctgtacacaatccccaggacaacttttattt
gctcaatttgatctcaacaaagttctcaattatggtgcctctttagtggggtctgaagaa
aagatgtacgaaatggataatggcacaaatcaactcacagataaggaccagctgactaga
cagagacagatgttgaacaaaagacttggcctggatgtggctggtaatcttggtcttgga
attggctcagatatcttcactgacgatgacctgattatgggaatcaagtccagcaatgga
gtgagcacagaggaccagaaatctgtgtcagatattgtgaaacaacagttgcttctggta
actggaggaatgagtgctagggagaaaaaccgagtcaagcggaaggcaaaaatactggca
aagcagcgatcgaaggaatgtcaaagtgaacaaatgaccttggagacagagccaccctgt
aaaaaagccaaatctaggaatgaccttgacctgggcagtgatggaaagcttgtaatggaa
agttcaattgataacactctgaatatggaggaggtagaggagtggccttttgagacattc
tgtgagctgctcatgaacgacctgtttcagagtacgtgggaaagtcggcacggtgctgca
acaggattacgagaagtggtcaaacttcacggtcagtcggctggcatgtctgtggatact
ccatctgatcaggtgaagactatgaaccaagtgtggctctcggacctggccctgagactt
gtgtgtgttattgcccttgacagatttggggactacgtatcagatgaggtagttgccccg
gtgagagagacatgtgcccagacccttggagttgtagttcggtgtttggagacttggggt
gtagaaggtgttgttaacatcctgctccagttgttggcccagaaacagtgggaggtgcgg
cacggtggactactaggcttcaagtacctcctggctatcagaaaggatatgacagacaga
ctcctaccaatcgtcctgccctgtttgtttcacggacttcaggatgatagtgatgatgtg
cgtgctgtggcagcagccgctcttgttcctgtagctgacagtgttgtatctctacttcct
ggccaggtacccctaattgtggccactctatggcagacattgcttgacttggatgatttg
acctcctcaaccaacagtattatgactctcctttccacaattatgtcccatcccagggcc
tcagttcttgattggctcactactcctttaactgaacttgtcccaagactttggccattc
ctgcgacacaacatagcatctgtgaggaaatccgctctccaaaccttcagcactctcctt
gatattgaaagtgttcagcaccctacaaatatttggctacccctgattctacaggacgcc
ctccgacacctcatacagcgaagtctgcttgaggaacgacaagacgtcctggtcatggtg
ggccaagtctggtccaaactgctgtccaagtcacctatagaccatctcatcgccatggca
acaccctggcttggtgtttggctttctctgtgtatgcagccttccaaggttccttttgaa
ccagcctatctgatccaggcaaaacatcgcggaagggtggaggttggtcgacataaagca
agtgttggggctgagaaggaacaacaggattatattgcaggtaccaataccctcaatagt
gacgtacaggaacgggacacggccgtaatgaaagccaggatgcatacctcaaggttaata
ggtattctatgtagttacatcaccagagatgtgccaaattttccaccggaggctgagaag
cctgtcaactccttgtgtaagcttttcctcttccatatgaacaacaagtcagccatacag
cgctttattgttggtcaagttctatactactgggcttctgttcaacagaatagcccctgt
acttcggaaaccaaatccaagctactggagtgccttaatgaagcaatctactttgatgag
atagctgcttcgtttacccacatgcagtctgactgtcagaactttatagcaggtctcaaa
caacaggcaatagatatggattccatcattccaccagggagtatcctgtctgtagagcag
gcctcagcactgaccaccagtgtatatgaccaggtgaagatcacactcaaaccaaattat
ctacaaacatttgaggatcgtaggaaacagctacgcaccatcgtggaacagacaacacag
gaacttcaaactcttactattagggtacaagttagcctggctaaagctgttgtgatgtta
gatatcctaccagataaactaaacccagtggtgcggccactgatggactgtatcaaaaag
gagagcaacacaagcatacagagagaggctggagactgtttattgttccttatccagaaa
tgtatcggccgaaatccaacccccaacaataaagtggtgaaaaacttgtgtgggttcctc
tgtggagatcctagctataccccaaaaatcaactcaccagctccacccacttcagaagcc
acatcttccaatgaagttctgtgcagtaaacacacaggaatccttacactgacaaaacaa
caacgagtcccagatacaggaaagaagtggttacgccgcactcctagtgtcaaagttgat
gttgatatacctgccgatgtcacccaggaatctgcagaggtccagcgccagttaaatatc
cagagacgaggtgctgacctttcccttaatgtgatcactcgccaattaggagaccaatta
cctcagtctgtgccccagttttgggaaactctgtctcaaccactgagtcaggtacccgca
ggtgatgacattgagtggactctgacagaggagggcgctgaggaactggtccacagtcta
caggtgttggagtgtgtgtgtgcttccttggactctaaccttgtctcacagattatacag
aagctcccaaacatgctgacttgtctacaatgttcctacacagctgtcagacatatggca
gcacgctgtgtaggggctctctccagagttgtaactgccgatctcatgacattttgtttt
gaaaatgttatccctttccttggagcctccgacaaagaaccacagagacagggagctgta
gaagctttgtcacatgtaattgaccagatgggtgtagacctgttaccttacattgtcctg
atggttgtccctatcctcggccggatgagtgaccagaatgacgctgtccgtctgctcgcc
actaatagctttgcttccctgattcgccttttacctctggaggcgagtattcctgaccca
ccggagatgaacccaagactagcagccaagaaagaggagcagcgcaaatttctagagcag
ctgatggatggatctaaagtagaaagctacaaagtatctgtaccagtggacgctgacctc
cgcaaataccaacaggatggtgttaactggctggccttcctcaacaaatactctctccat
ggcattctgtgtgacgacatgggactggggaagacacttcagtcgatctgtattttagcc
agtgaccatttccttcgtgatcagaaatacaagaaaaacaagatccctgattgtgcccct
ttaccttccatagtgatttgtccacctactttgataggccactgggtgtatgaagttcag
aagtttctggaccagcaatatttgaatcctctcatgtatgcaggccctcccagtgaacga
gtcagacttcagaaacgagtgaagaaacacaacttgattgtagcctcctatgatgttgtc
cgcaatgacgttgactttttcagtaccatcaactggaattactgtatcctagacgaaggt
cacatcattaaaaatgggaaaacaaagttatctaaggcggtaaagcagctcaactgtaac
catcgtctggttctgactggaactcctatccagaataatgtccttgacctctggtcactc
ttcgacttcctgatgccaggattcctcgggacagaaaaacagttccaggccaggtacggc
aaaccaatcctccagagtcgtgacgctaaaagtacctcgaaggaacaggaagctggagcc
ttagccatggagtctctgcatcgtcaggttctaccgtttatcctccggagattgaaggag
gatgtcctacaggacctgcctcctaaaattatacaggactactactgtgatctcagcagc
ttacaggtggaactgtatgaagactttgctaagtcccaggctaagaagggagtagaggac
atggtgacctctctcaaggtcgagtctccagagaagaaagttcccagtcgtggcagcaca
catgtattccaggcgttgcagtacctccgtaaagtgtgtaaccacccttcacttgtactg
gtgcctactcacccgaagtatgaacagataacgtcacaactcaaaaaacagaattctaac
ctcagggatatacagcatgctccaaagctcaatgctctcagacaactacttatggattgt
ggaattggagttgaccagtccatgcctgcctctggtcaacaacaagtgaccagtaacatg
ccagtggtcaatcaacatagagtgctgctcttctgccaactcaagggcatgctggacata
gtggagaaagaccttctcaaaacacacatgccaggagtcacctacctgcgactggatgga
agcattccagcaggatcacggcataatattgtcaacagattcaacaatgacccatctata
gaccttctcctgttgaccacacatgttggtggtcttggccttaatctgacaggtgcagac
actgtgatatttgtggagcatgactggaatccaatgaaagacttacaggcgatggacagg
gcacacaggattggacagaagaaggtggtcaatgtttatcgtctggtgacaagaggaaca
ctggaggaaaagatcatgggattgcagaaatttaaaatgaccattgccaacactgtgatc
agccaagagaattccagtcttcagaccatgggcacagaccagttgttagacctattttca
ttggatgatgagaagaagggtcaaagttcagcaggttctaaccaatcagaatctggttct
tccaagaaggaaactgtttcctccatgttagagaaccttggtgacctctgggacgaggac
cagtatgactcagagtatgacatgaaaaattttctgaactccttagccacgtga
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