Argopecten irradians (bay scallop): 138323258
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Entry
138323258 CDS
T10542
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03430
Mismatch repair
airr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138323258
03460 Fanconi anemia pathway
138323258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
airr03400
]
138323258
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138323258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
138323258
NCBI-ProteinID:
XP_069123801
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All DBs
Position
5:complement(22983302..23009629)
Genome browser
AA seq
964 aa
AA seq
DB search
MEEPESRCDGEQTAMAGSIKPIDRKSVHRICSGQVVLTLATAVKELIENSIDAGATSVEI
KLKNHGLELIEVIDNGSGVEEKNFEGLTLKHHTSKLQDFSDLVDVETFGFRGEALSSLCA
LSGLTIITRHSSSNVATKLEFDHNGKILQRTAQARQVGTTVILQNVFSTLPVRHKEFQRN
IKKEFAKMINVVNSYCIISTNVRISCSNQTDKGHRSTVVSSKGNTSLKDNISNVFGPKQM
NSLLEIKQLGPNDEVCNEYGLGACQGNVPFRLEGYVSQCVHGQGRSSADRQYFFINKRPC
DSPKLSKVVNEVYHQFNRHQYPFVTLHVTMAREAVDVNVTPDKRQIFLQDEKLLLATIKT
SLLALYQPLTSLIQPVQTPKGAGTEARNHLKQSNEEQLSSTSRSVSSLGRLKRTFSSVFS
AKDHTPSKEQPPKQRKLDNFVTKKTTSDIDLDSVETKTTLEGVTVVVLPDSSTEYCQPGV
DTSEKQSNLCSISQEERLERQMSIGSEDKMSQDSKTSESQTFQVKGVFEDENLQDIERHN
SAISSGSMLDSQSSQETLLNAKCSNTEEIDTGIPMTSQNSSDQNSIDTLESEDPLKPLSK
NIEENTKSTSSSPYLSQSPVTKLKTSVFSSSTRSDSKPSPSVLSPTLSHHINSVSDTNGP
IQSSGLPTSSSSSEEVVYPLAGGESNINPTQGDSVCEETEPQLKITEFDESKLKSKPEKS
MTFSMLQLKNKISERSRKNKTEKEQEFYRTFRANITPTDNQSAEEELQREITQDMFSKME
ILGQFNLGFIIVKNGEDLFIVDQHATDEKYNFEQLQKHTVLQSQRLIQPKNLELTASNET
ILMDNLDIFRQNGFDFLIDEQADPTQRVKLVSTPVSKNWNFGKEDVEEMLFMLTDSPGVM
CRPSRVRQMFASRSCRKSVMIGTALNHTEMKKLVTHMGEIEQPWNCPHGRPTMRHLINLN
MVPK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccagaatcaagatgtgatggagaacagactgctatggctggcagcatcaaa
cccatagacaggaaatctgtacacagaatctgttctggacaggtagtactgacattggct
acagcagtgaaggagttgattgaaaacagtattgatgctggggccacttctgttgaaatt
aaattaaagaaccatggactggaattgatagaagtcatagacaatggatctggagtggag
gaaaagaattttgaagggctcaccttgaaacatcacacatccaaactccaggacttttcc
gacttggttgatgtggaaacatttggattccgaggagaagctctgagttccctgtgtgca
ctgagtggactgactatcattaccagacattccagttcaaacgtggcaacaaaactggaa
tttgatcacaatggtaaaattctacagaggactgcccaggccagacaggttggaacaaca
gttattctgcaaaatgtgttttcaactctgcctgtgcgacacaaggagtttcaaaggaat
atcaagaaagagtttgctaagatgatcaatgtggtgaattcctattgtattataagtact
aatgtacgtatcagctgttccaaccaaacagacaagggtcataggtctacggttgtgtca
agtaaaggcaataccagtttaaaagacaacatttccaatgtgtttggacctaaacagatg
aacagtctacttgaaataaaacagcttggtccaaatgacgaggtgtgtaatgaatatgga
ttaggggcctgccaaggaaatgtcccattcaggcttgagggttatgtttctcaatgtgta
catggacaaggccgaagcagtgcagatcggcagtatttctttatcaacaaacgtccatgt
gactcacctaagctgtccaaagtagttaatgaggtgtatcaccagttcaatcgccaccag
tatccctttgttacactacatgttaccatggcgagggaagcagtggatgtcaatgtaact
cctgacaagagacagatcttccttcaggacgagaaacttctcttggccactatcaagacg
tcccttcttgcactgtatcagccattgaccagtcttatccagccagtccagactcctaag
ggtgcagggacagaggcaaggaaccacttgaaacaatccaatgaagaacaactatccagt
accagcaggtctgtcagttcactgggacggctaaagagaacattctccagtgtgttttca
gcaaaggaccacacgccaagcaaggaacagccaccaaaacagagaaaacttgacaatttt
gttaccaagaagacaacatctgacattgaccttgactctgtagagaccaagacaactttg
gaaggtgtaactgttgttgtcctgccagactcttccacggaatactgccagcctggtgta
gatacgtctgaaaagcaatccaatctctgcagtatttctcaggaggagaggttggaacgt
caaatgtcaatagggtcagaagataaaatgtcacaggattcaaagacttcagaaagtcaa
actttccaagttaagggggtgttcgaagatgaaaatctacaggatatagaaagacataat
agtgcaatttcatcaggttcaatgttagattctcaaagttcacaggaaactttacttaat
gctaaatgttcaaatactgaggagattgacaccggaataccaatgacaagtcagaattca
tcagatcagaacagcatagacacattagaaagtgaagatcccctcaaacctttatctaag
aatattgaagaaaatacaaaatctacctcatccagtccctatttatcacaatcacctgtt
actaaattaaaaacatctgtgttctcttcatcaacaagatctgactctaagccttcacca
tctgtcctgtcacctactctatctcaccacattaactctgtgtcagacacaaatggacct
atccagtctagcggtctccctacatcctcatcctccagtgaagaagtcgtgtatccacta
gctggtggggaaagtaacataaatcctacacagggggattctgtgtgtgaggagactgaa
cctcaactgaaaataacagaatttgatgaatcaaaactgaaatcaaaacctgagaagagc
atgacattcagcatgcttcagctcaaaaacaaaatctctgaacgaagccgaaaaaacaaa
actgaaaaagaacaagaattttaccggacattccgggcaaacatcacaccaacagacaac
caatctgcagaagaagaattacaacgagaaatcacacaggatatgttcagcaagatggag
atccttggtcagtttaacttgggctttatcatagtgaagaatggagaggatctgtttata
gttgaccaacacgctacagatgagaaatacaactttgaacagctccagaaacacacagtt
ctacagagtcagcgtctcatacaacctaagaatctagaattgaccgccagcaatgaaact
atcctaatggacaacctggacattttccgccagaatgggtttgacttcttaatagatgaa
caagccgaccccacacagcgtgttaaactggtatcaactcctgtcagcaaaaactggaac
tttggaaaggaagatgttgaggagatgctttttatgctgactgattctcctggcgtgatg
tgccgtccctcccgtgtacgccagatgtttgcttctcgatcctgtagaaagtctgttatg
attggaacagccctaaaccacacagaaatgaaaaagttggtcacacatatgggagagata
gagcaaccctggaattgtccccatggtcggccgacaatgagacatttaatcaaccttaat
atggtgccaaaatga
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