Argopecten irradians (bay scallop): 138323475
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Entry
138323475 CDS
T10542
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
138323475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138323475
Membrane trafficking [BR:
airr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
138323475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
DUF6987
Sec20
Lipoprotein_2
SbsC_C
BPS1
Insulin_TMD
DUF4064
DUF1664
BORCS6
Zw10_N
DUF3958
Exonuc_VII_L
Mt_ATP-synt_D
Orf78
FTCD_C
Motif
Other DBs
NCBI-GeneID:
138323475
NCBI-ProteinID:
XP_069124219
LinkDB
All DBs
Position
5:29616649..29629103
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AA seq
222 aa
AA seq
DB search
MKNDRMASLIESYEQQYSSLTADITHNISKISNTHGAEKQKYIRQVDKLFDEVSELLEQM
ELEVKDLPSRDKQKYQTRVKSYKTELGKLQTDTRRAKLGIDSSRDELLGDDTHESEDQRK
RLLDNTDSLDRTSRRLDHGYRIALETEEMGAQVLQDLSGQRQTIQRSRNRLEEMNSSLGK
SSRVLSGMMRRIIQNRLMLVIICAILLLVIGLAIYFIVKRSS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgacagaatggcgtctttgattgaatcgtatgaacaacaatattccagtctg
acagcagatattacacacaatatcagtaaaatatcaaatacacatggagccgagaagcaa
aagtacatccgtcaggttgacaaactgtttgatgaggtgtctgaactgttggaacaaatg
gaattggaggtgaaagatttgccatcaagagacaaacagaaataccagactcgtgtgaaa
agttataaaactgagcttgggaagctacagacagacacaaggcgagctaaacttggtata
gatagcagtcgagatgagcttctaggagatgacacacatgagtctgaagatcagagaaaa
agacttttggacaacacagattcccttgaccgtacctcacggcggttggatcatggatac
agaattgctttggagactgaggaaatgggtgcccaagttttacaggaccttagtggtcaa
agacagactatacaacggtcaagaaataggctggaagaaatgaatagcagtcttggaaaa
agttctcgagttttatctgggatgatgagacgtattatacagaacaggctgatgctggtg
attatttgtgcaatattactgttggtgataggattagcaatatactttatcgtgaagcga
agctcttga
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