Argopecten irradians (bay scallop): 138323587
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Entry
138323587 CDS
T10542
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138323587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138323587
Spliceosome [BR:
airr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138323587
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
138323587
NCBI-ProteinID:
XP_069124396
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Position
5:33151371..33160645
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AA seq
492 aa
AA seq
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MSLADELIADYEDADDDLGEPEAEVDSMDITEVDEKAEVDYRDKETVKSVAKLRDSEQLS
NILTNIEKYASQPRRQKVAGPVEADPEYRLIVEANNITVEIDNEINVIHKFTRDHYSKRF
PELESLIQTPMEYIKTVKELGNNIMENSKKNEVLQEILVPATIMVVSVTASTTPGTSLST
EEMATVMEACDMAVDLTEYKAKIFSYVESRMTFIAPNVTIIVGASIAAKLMGTAGGLTNL
SKMPACNVQSLGAQRKTLSGFSMASIQPHMGYIYNCDIVQKTPPELRKKAARLVSAKCTL
AARVDSFHESVDGNVGDNLRAEIDGKLDKLLEPPPVKTVKALPTPIDAARKKRGGRRARK
MKERLGLTEVRKAANRMNFGEIEEDAYQDDLGFSLGTLGKSSSGRIRGPVVDSKTKAKIS
KTLQLKVQKQNQTWGGSTTVKRQVSGTASSVAFTPLQGLEIVNPQAAEKKVSGGSSTYFS
STGSFVNVKQNR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgatgagttaattgctgattatgaagatgctgacgatgatttgggggaa
cctgaagcagaggtggattctatggacataacagaagtggatgaaaaggctgaagttgac
tacagagataaagaaactgtgaagagtgttgcaaagttacgggatagtgaacaactctct
aatattttaacgaacatcgaaaaatatgcatcacaaccaagaagacagaaagttgctgga
cccgttgaggctgatccagagtacagacttattgtggaggctaataatattactgtagaa
attgacaatgaaatcaatgtaattcacaagtttacaagggatcactactccaaaaggttt
cctgagttggagtcgttaatccagactccaatggaatatatcaaaacagttaaggaactt
ggaaataatataatggaaaactccaaaaagaatgaagtcctccaagaaattctcgtgcca
gctacaataatggttgtaagcgtgacagcatctacaacaccaggaacaagtctgagtaca
gaagagatggctacagtgatggaagcctgtgatatggcagtagatctgactgagtacaag
gcaaagatattctcctatgtggaatcgaggatgaccttcatcgctcctaacgtcactatc
attgtgggagcgtccattgctgctaaacttatgggtacagccggaggcctgacaaacctg
tctaagatgcctgcctgtaacgtacagtccctaggagcccagcgcaaaactctgtcagga
ttctccatggcatctatccaaccccatatgggatacatttataactgtgacattgtacaa
aaaacacctccggagttacggaaaaaagctgcccgattggtgtcagccaagtgtacattg
gcagctcgagtagacagtttccatgagagtgtcgacggaaacgtgggcgacaatctgagg
gctgagattgacggcaaactagacaagctcttagaaccaccaccggtgaagacagtgaag
gctttacccacacctatagatgctgcgcgaaaaaagagaggaggacgcagggcaaggaaa
atgaaagagagacttggtttgacagaggtcaggaaagcagcaaacagaatgaactttgga
gaaatagaagaagatgcttatcaggatgaccttggcttctccttgggaacgctgggtaaa
tcttcctctggacgtatccgaggacctgttgtggactcaaaaacaaaggccaagatctcc
aaaacgttacaattaaaggtacagaaacagaaccagacatggggaggaagtactacagtc
aaacgacaggtgtcgggtacagcctccagtgtagcattcacacccctacagggattggag
attgtaaatccacaagcagcagaaaagaaggtctctggaggaagctcaacttacttctcc
agtacgggtagttttgtgaatgtcaaacagaacaggtga
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