Argopecten irradians (bay scallop): 138323679
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Entry
138323679 CDS
T10542
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138323679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138323679
03036 Chromosome and associated proteins [BR:
airr03036
]
138323679
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138323679
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138323679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
138323679
NCBI-ProteinID:
XP_069124557
LinkDB
All DBs
Position
5:complement(36079378..36094279)
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AA seq
645 aa
AA seq
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MAEREREPHFCAINDLSCSQGLQAVWGCGNQFFVFPGKKAILLNDRQPVLMKEEMIREVR
WDMDLHKPVLRKLVNESHNLFTCLQEQAKTTSGAALHPHIIRSSKQYRAALKAYSLELKI
LADSTINEEQKQDFLEHLQLLEMSELIWGLCEILFIDSLPGGLVIAPLLDWLRFHFQTGE
QMFLEIIQEDQPEHHPLYWDTVYRLVLQGQTDNVRRLLSLHSSKHSAAFTSMDDLLRKMP
QHSQLLRGHSAAEFDMKWRHWRDECERRLEEGEFSSYGNLETIGKILMGNDQVFSELRDL
SETWYHMLVSKLLYQNPTIKGYDLQYHIQGCLDEYRSNARIGELDNILLSALEYDIHQVI
KDSSAMFSNWWFVAHLTDLLQHCGQLDSHKLQFGSNLREFLLLEYATSLMSHKSLWIVGV
GYLDHCPEFGRKHLEHFMENISIESEKKAQKLLHICQERNLVEQAKSICKVMGRRHMQYK
RLGAALTWFLKSKDVALSTVIAERFLFEYSEKGSFSNLDLIDNLGPSMLLSNRLTFLGKY
REFHKLYEEKEFEAAGQLLLSLLQARLAPKQFWVTLLVDAMPLLEAEKVIFSSAQTFDLM
HCLEELMREFKDIDVREKEKLALLRLALTRNLSRAIVTEGTVRLT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgggaaagagaaccacacttttgtgctataaacgatttatcatgttctcaa
ggcttacaagcagtatggggctgtggaaatcagttcttcgtgttcccaggaaaaaaagca
attcttttaaatgataggcagccagtgttgatgaaggaggaaatgatacgagaagtgaga
tgggatatggacttacacaaacctgttcttaggaaacttgtcaacgaatcacataacctc
ttcacctgtctacaggagcaagccaagaccacatccggtgcagctcttcatcctcacatc
ataagatctagcaagcagtatcgagcagcattgaaagcatacagccttgaattgaagata
ttagcagattctacaattaacgaagaacagaagcaagatttcctggaacatctacagttg
ttagaaatgtctgaattaatttgggggctgtgtgagatcctctttatcgacagtttacca
ggaggattagtgattgctccactgctggattggcttcgattccactttcagaccggagaa
caaatgttcctggaaattattcaggaggatcaacccgaacaccatcctctttactgggat
acggtctaccgactggtcctccagggtcagactgataatgtccgccgacttctctctctc
cactcctcgaaacacagtgcagccttcaccagtatggacgacctcctcaggaaaatgcca
cagcattcacagctattaagaggtcactcagccgccgagtttgatatgaaatggcgacat
tggcgagatgaatgtgaacggagactagaggaaggagaattttcatcatatggaaatttg
gaaacaattggaaagattctgatgggtaatgaccaagtgttctccgagttgcgtgatttg
tctgagacatggtaccatatgctggtgtccaaacttctgtaccaaaacccaaccatcaaa
ggctatgacctgcagtaccacatacagggctgtttagatgagtaccgtagtaatgccagg
atcggtgagctagacaacattctcctgtctgctcttgagtacgacatccatcaagtcatc
aaagacagcagtgccatgttcagtaactggtggttcgtggcccatctcacagatttacta
caacactgtggacagctggactcccataaactacaatttggttccaatctgagagaattt
ctgttacttgaatacgcaactagtttaatgtctcacaaaagcttgtggattgtgggggtt
ggttatttagatcattgtccagagtttggaaggaaacatttggaacatttcatggaaaat
atttctatagagtcagaaaagaaagctcagaagctgttacacatatgtcaggagaggaat
ctagtagaacaagccaaatctatctgtaaggtgatgggacgaagacacatgcaatataaa
cgactgggtgctgctctgacgtggttcctcaaatctaaggatgtagcattatcaacggtg
atagcagagcgattcctatttgagtacagtgagaagggtagcttctcaaacctggacctc
atagacaacctaggaccttcaatgttgctgagtaatcgactgacattcctaggtaaatat
cgtgagttccacaaattatatgaggagaaggaatttgaagcggctggtcagttattactt
tccctgctgcaagctcgactggctcccaaacaattctgggtgactctccttgtggatgcc
atgccccttctggaggctgaaaaggtgatattcagcagtgctcaaacgtttgaccttatg
cattgtctagaggaattgatgagagagttcaaggatatagatgttcgtgagaaggaaaag
cttgccttactacgtctggccctgacgaggaatctgtcacgggcgatagttacagagggg
acagtcagactgacttga
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