Argopecten irradians (bay scallop): 138323785
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Entry
138323785 CDS
T10542
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138323785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138323785
03009 Ribosome biogenesis [BR:
airr03009
]
138323785
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138323785
Spliceosome [BR:
airr03041
]
Complex A
U1 snRNP components
U1 related factors
138323785
Complex B
138323785
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
Pre-60S particles
Helicases
138323785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Tuberin
Motif
Other DBs
NCBI-GeneID:
138323785
NCBI-ProteinID:
XP_069124731
LinkDB
All DBs
Position
5:38660336..38670356
Genome browser
AA seq
704 aa
AA seq
DB search
MSYRDRMFDSSSRSGGGGGFFQFGGNNGKLPGGFPSRFGQGGGSGGGRFGSGGRGGGGGG
GFGGGMRGKLDKNSQPGQNLRKPRWESERLIPFEKNFYREHPKAANRDPNEIAAFFDSNK
ITFKGSNPPKPVLTFEEAGLPEYVMASFRRQAWTAPTAIQAAGWPIALSGRDFVGIAQTG
SGKTAGFICPATVHIMAQPNLQPRDGPIVLVLVPTRELAQQVQEVAIEFGQSSRIRSVCV
YGGSPKGPQIRDLERGAEICIATPGRLIDLLEAGKTTLKRTTYLVLDEADRMLDMGFEPQ
IRKILEQIRPDRQTLMWSATWPKEVRKLAEDFLKEYVQLNIGALQLSANHNILQIIDVCN
DSEKDYKLLKLLEEIMQEKENKTLVFTETKRRADELSRKMRREGWPVMCIHGDKSQPERD
WVLSEFRNGRTPILIATDVASRGLDVEDIKFVINFDYPSSSEDYVHRIGRTARAGNTGTA
YTFFTPDNVKQANDLVNVLREANQVINPKLLQLAENSRFGFKGRSRARGRDDRGSRFGGR
DSFGSRDRGSSRGGRGGFGGSRGGFSDGGGSNFNRDRSGGGSVGGGNRFSGQGASRFGGA
SNNSTNNSYGNNANKSYGQGGANNYGGQNMNGNYGGHQQSQQNGYGNSGANNSAGKPKDL
SNMAYMYSQWMQQSQKPNQAPISNGNPPPPPAPPKFPPPPPPSM
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacagagacagaatgttcgattcttccagtcgttcgggggggggggggggattc
ttccaatttggaggaaataatggaaagttgcctggtgggtttccgtcacgctttggacag
ggaggaggaagtggaggcggtcgctttggaagtggaggtagaggaggtggtggtggcggg
ggttttggtggaggaatgcgaggaaagcttgacaagaacagtcaaccaggtcaaaacctt
agaaagccaagatgggagtctgaacgattgataccatttgagaagaatttttatcgtgaa
cacccaaaagctgctaacagagatcctaatgaaattgctgcattttttgattccaacaag
ataactttcaaaggaagcaatcctccaaaacctgttctaacatttgaagaagcaggactt
ccagaatacgtcatggcttcattcagacgtcaggcttggactgctccaacagccattcaa
gctgctggttggcctattgctttgtctggaagagattttgtaggaattgcacaaactggc
tcaggcaaaactgctggtttcatctgcccagctaccgtacatatcatggcccaacccaac
ctgcaaccacgtgatggacctattgtgttggtattagttccaactcgagagctagctcaa
caggtacaggaagttgcaattgagtttggtcagagttcaaggataagaagtgtatgtgtt
tatggtggatctcccaaaggccctcaaatcagagacttggagagaggagctgaaatatgt
attgccacacctggaagactcatagatcttcttgaagctggaaagactacactgaaaaga
acaacttacttggtgctggatgaagcagatagaatgttggacatgggatttgagccccag
atccgtaaaattttggaacaaattcgtcctgatcgccagacactcatgtggagtgcgaca
tggcccaaagaagtaagaaaacttgctgaagattttctgaaagagtatgtacaactcaac
attggagccctgcaattgagtgcaaaccacaatatccttcagattatagatgtgtgcaat
gactcagaaaaggattacaagttgttgaaattgctcgaggaaatcatgcaagagaaggaa
aataaaacactggtgttcacagagacaaagaggagagctgatgaattgtctcgtaaaatg
aggagagaagggtggccagttatgtgtattcatggtgacaagtcccaaccagagagagac
tgggtactcagtgagttcagaaatggacgtacaccaattcttattgcaacagatgtagct
tcccgtggtctagatgtggaagacattaagtttgtcataaactttgactacccctcaagc
tctgaggactatgtacatagaattgggcgtactgccagggcaggcaacactggaactgct
tacacattcttcacccctgacaatgtcaaacaagctaatgatctagtcaatgttctgcga
gaggccaaccaagtcatcaatccaaaactccttcagttggcagagaactccagatttgga
ttcaaaggtcgcagcagggcacgaggacgtgatgatagaggcagtcggtttggaggtcgc
gattcatttggttctagagatagaggatcttctcgcgggggacgtggtggattcggaggg
agcaggggtggatttagtgatggtggtggttccaacttcaacagagacagatcaggtgga
ggttctgtaggtggaggtaacaggttctctggtcagggggcttcaagatttggtggggcc
agcaacaactcaacaaataactcatatggcaacaatgccaacaaaagctatggacaaggt
ggtgccaacaactatggcggtcaaaacatgaatggaaactatggaggacatcaacagtca
caacagaatggctatggtaatagtggagcgaacaacagtgccggcaaacccaaggacttg
tcaaatatggcttatatgtacagccaatggatgcagcaatctcaaaaaccaaaccaagcc
ccaatctctaatggcaatccaccaccaccaccagcgccgcccaagttccctcccccacca
ccaccatctatgtga
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