Argopecten irradians (bay scallop): 138323795
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Entry
138323795 CDS
T10542
Name
(RefSeq) transcription factor SOX-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138323795
Transcription factors [BR:
airr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138323795
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Paralog
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Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138323795
NCBI-ProteinID:
XP_069124744
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All DBs
Position
5
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AA seq
469 aa
AA seq
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MSDSDESRGSPLEQPSTEQLLDAVRGAGAGLLHQDDKLSPAELSAQGLNVDKFPKQIQDA
VSQVLKGYDWSLVPMPQRGPNGEKRKPHIKRPMNAFMVWAQAARRKLADQYPHLHNAELS
KTLGKLWRLLNEEEKRPFVDEAERLRVQHKKDYPDYKYQPRRRKPLKSASGGQTEGGQVP
PGLMFKGLNEHSPSAISDGDSGSDCSNHNPNGPPTPPTTPNQHDLITLKCMPDRLRHRPH
MPGHPIDFRSVDLHTYPSEMVLPIDNFDDHELDQYLPTTASHMPGTHAPEQYTSCYGTAS
SSTTTSSSWTSNYRVSSSGMCLPSYPLPQNNDVSSPYDLSNHSPQSATNASSQSPPMHSP
SYQPNSTGSTGTCKYIGEEDQATVKLEPLGARSAPRQSQASSQGQFDTYNISPPPRYDSN
HHGSQFTSQHGFLPASTTAQPYQYMGVSRQMFNPIPAAVPTDQTWNRFT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactctgatgagagcaggggatcccctctggaacaaccatccacagaacagtta
ctggacgctgtccgaggggccggagccggacttctccatcaagatgacaaactcagtccg
gcggaacttagcgcacagggacttaatgttgataaattccccaaacaaattcaggatgct
gtgtctcaagtactaaagggttatgactggtccctagtaccaatgcctcaaaggggccca
aatggcgagaagaggaagccccatattaaaagaccaatgaacgccttcatggtttgggcc
caggccgcccgtaggaagttggccgatcagtatccgcatcttcacaacgctgaacttagc
aaaacccttggcaagctatggagacttctaaacgaggaagagaaacgtccatttgttgac
gaagcagagcgcttgcgtgttcagcacaagaaggactacccagattacaagtaccaaccg
agacgcagaaagcccttaaagagtgccagtggtggacagacggaagggggacaggtccct
ccaggtctcatgttcaaaggtctcaacgaacactcgccctccgccataagtgacggagac
tcgggcagcgactgctccaaccacaaccctaacggtccaccaactcccccaaccacaccc
aaccaacacgacctcatcactctcaagtgcatgcccgaccgtttacgccatcgcccacac
atgcctggtcatccgatcgacttccggagtgtggacttacatacatatccttcagaaatg
gtccttcccatcgacaacttcgacgaccacgaattggatcaatatttaccaacaacagca
tcccacatgcctggtacgcatgctccagaacagtacacttcctgttacgggacagcttct
tcatcgacaaccacatcgtcttcatggacgtccaactatcgcgtatcatcttccggcatg
tgcctaccctcctacccattgccacaaaacaatgacgtttcgtccccatacgatctgtct
aaccattcgccacagtcggccaccaatgcttcatcccagtctcctcccatgcatagtcct
tcataccaaccaaattcaaccggaagtacagggacatgtaagtacattggtgaggaggac
caggcaactgtcaagctagagcccttgggtgccagatcagccccacgtcaatcccaggct
tcttcacagggacaatttgacacttacaacatttcccctcccccacgatacgacagtaac
caccatgggagccagttcacctctcaacatggcttccttccggctagcaccaccgcccag
ccataccagtacatgggcgtatcccgccaaatgttcaacccaatccctgccgccgtccca
actgatcagacgtggaatcgcttcacataa
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