Argopecten irradians (bay scallop): 138323921
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Entry
138323921 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
airr04137
Mitophagy - animal
airr04144
Endocytosis
airr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138323921
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138323921
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138323921
04137 Mitophagy - animal
138323921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138323921
04121 Ubiquitin system [BR:
airr04121
]
138323921
03029 Mitochondrial biogenesis [BR:
airr03029
]
138323921
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138323921
Membrane trafficking [BR:
airr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138323921
Autophagy
Mitophagy
Other mitophagy associated proteins
138323921
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
HECT type E3
138323921
Mitochondrial biogenesis [BR:
airr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138323921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
138323921
NCBI-ProteinID:
XP_069124962
LinkDB
All DBs
Position
5:complement(42429244..42488683)
Genome browser
AA seq
768 aa
AA seq
DB search
MASNGPRRHGQSTMKIRLTVLCAKNLAKKDFFRLPDPFAKISVDGSGQCHSTDTSKNTLD
PKWNQHYDLYIGSKDSVTISIWNHKKIHKKQGAGFLGCVRIKSNAIQQLKDTGFQRLDLQ
RNNSDDNDNVRGQIVISLISRDRGNSQAGSGPNVTDASVIPSSIPSDPNELPEGWEERRT
ASGRVHYVNHLTRSTQWQRPTRPASEFVRNNAVSSAHSRQTSSNSGTADNNTSSTTNNNN
EDSETSNPPLPRRRSTRHRNYLNRSHLHNAVDLPSGYEQRTTQQGQVYFLHTRTGVSTWH
DPRVPRDLSSSEIREEDLGQLPAGWETRHTGNGRVYFVDHNNRTTQFTDPRLSANIHLLQ
TTARSTSSHNHRCNDKENESPVPKYKRDLVQKMKILRQEFSALQPQGGHCRMEVSREEIF
EDSYRQVMKLRAKDLRKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYARDD
VYTLQINADSGVNPEHLSYFHFVGRIIGMAIFHGHYLDGGFTLPFYKQLLQKAVTLDDLE
NVDPELHRSLVWLLENNIESVLDHNFCVEHNSFGQFTEYELKPGGNEIPVTEDNKKEYVK
LYVHWRFMRGIEAQFLALQKGFNEVIPQHLLRPFDERELELMIGGLGKIDLQDWKNHTRL
KHCTQDSNVTKWFWRAVESFDDEMRARLLQFVTGSSRVPLQGFKALQGSTGAAGPRLFTI
HLVETNTDNLPKAHTCFNRIDLPPYESYEKLLSKLTCAVEETCGFAVE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaacggaccaaggcgacatggacaatctacaatgaaaattcgtttaacagta
ctatgtgccaaaaatctagccaagaaggatttctttcgacttccggatccgtttgctaag
atcagcgttgatggttcaggccaatgtcattctacagacactagtaaaaacaccctcgac
ccaaagtggaaccagcattatgacctgtatatcgggagtaaagactcagtgacaatcagt
atttggaaccataagaagatacacaaaaaacagggagcaggcttcctaggttgtgttcga
atcaagtccaacgcaatccaacaacttaaagacactggattccaacgactcgacttacag
aggaataacagcgatgataatgacaacgttcgaggacagattgtaatcagtctcatttcc
agggacaggggtaactctcaagcggggtcgggacctaatgtgaccgacgcctcggtcatt
ccatcatcgattcccagtgatccaaatgaacttcccgagggatgggaagagagacgcacg
gcaagtgggcgtgtacattatgtcaatcacctgacgcgtagcactcagtggcagcgtcca
acaaggcctgcgtcagagtttgtgcggaataatgccgtgtccagtgctcacagtcgacaa
acgtcgtcaaacagtggtaccgcggataataacacaagtagtactacaaacaacaataac
gaggatagtgagacgtcgaacccgcctctaccgcgacgtcgttctacacgccatcgcaat
tacctcaatcgttctcacttacacaatgcagtggatctgccaagtggctatgaacaacga
acgacacagcaaggtcaggtgtactttctacacacaaggaccggagtcagtacgtggcat
gatccacgagttcctcgggacctgtcaagttcggagatccgagaggaagacctgggtcag
ttgcccgctggatgggagacccgacatacagggaacggccgcgtgtattttgtagaccat
aataacagaacgacacagttcacagatcctcggctttctgctaatatacatctgctgcag
acgactgcgcggtccacgagcagtcacaaccatcgatgcaatgacaaagagaatgagtca
cccgtgcctaaatacaaacgagatcttgtccaaaaaatgaagattttacgacaagaattc
tctgcattacaacctcaagggggccactgtcgaatggaggtgtccagagaagaaatattt
gaggactcctatcgacaagtgatgaagctccgagccaaagatctgagaaagaggttaatg
gtgaagttccgaggggaagagggtctggactatggcggtgtagcaagggaatggttgtac
ctgctatcccacgagatgctgaatccatattatggcctgttccagtacgctcgggacgac
gtttatacactacaaattaatgcagactctggcgttaatcctgagcacttgtcctacttt
cactttgtgggccgaattataggcatggccatattccatggccattacctcgatggaggc
ttcaccctgcctttttataaacaacttcttcagaaggccgtcactctggacgaccttgag
aatgttgaccctgagctgcatcgaagtctggtgtggctgctagaaaacaacatagaatca
gtgctggaccacaacttctgtgtagaacataactcatttgggcagttcacagagtatgaa
ctgaagcctgggggtaatgaaatccctgtcacggaggacaacaaaaaggaatatgtaaaa
ttatatgtccactggcgttttatgagggggatagaagcccagtttcttgccttacagaaa
gggttcaatgaagtaattccacaacatttattgcgaccttttgacgagcgtgaactagag
ttaatgatcgggggtcttggaaagatagacctacaagactggaagaaccacacacggctc
aaacactgtactcaggattccaacgttaccaaatggttttggcgtgctgtcgaaagtttt
gacgatgaaatgagggcaagacttctccagtttgtaacaggcagctcaagagtgccgctt
caaggcttcaaggcattacaaggctccacaggtgctgcaggtccacgactctttactata
cacttggtggaaaccaacacagataatttacccaaggcacacacatgtttcaatcggata
gacttgcctccatatgaatcatatgagaaattactatcaaaattgacttgtgctgttgaa
gagacatgtggattcgctgtggaatag
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