Argopecten irradians (bay scallop): 138324100
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Entry
138324100 CDS
T10542
Name
(RefSeq) TATA element modulatory factor-like isoform X1
KO
K20286
TATA element modulatory factor
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138324100
Membrane trafficking [BR:
airr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138324100
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Rootletin
SlyX
Motif
Other DBs
NCBI-GeneID:
138324100
NCBI-ProteinID:
XP_069125264
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All DBs
Position
5:48320977..48349539
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AA seq
1461 aa
AA seq
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MSWWNASSFSDLASQAIKNAQKKIDKVLDIDEEGLQQPKASSVVKPSKKETPSSEKKNDF
WNTWMPAPQSDEAEGGTEEEKARSSWSMPWGSTHQDIEPEAKSESQTTAENKSTKPKLKV
SSAGQQSSSSQKGQGKTSKRTSDKIAKSSSDDNKKSVGNIPVVESKEKVENWDSSSAWAS
DSLIQWQGEGHQDVGGDLESEGQSQQHESLKVSSILESQNSEKADISPEHVDDRTVKTDE
EVDSKKDKLVKSSPEDDTLASNSDKGLDKDISDTLSDDKSADCKTDKSSSISVIESTEGV
ISLSDDSDQDGKPSVNKSDESSSVQLLQADSEEKIHSDELLEEDDKYAVDLDNVVIEPSV
NQVSESALTSVIEQEVKEDPSATETESELVIRENVNAEKQEASSDLTSYSTEEKDSETQK
EESRDLSESVSDSGSMMTKRDLKEIDSDNILAQSSISSGSGEGQGDEGIKDNPITETDVL
ESLASVHSPSTCSSVCSSDTSKLDSSMDTHTSEDTVVDNRGEEEVLGEVTPEEQISAKEV
SSVESIASMKTLDSSQVCPEESERRDSTEFQDDSRKITDSMFSVSSSSSYVKCMIEEAME
DNGRSEDNNSDCHSTGGEKSECSRSTGGHESGDEIDTTTSSDIEIISTPNSINNGDHTNK
MVDLSPLKIALQKTARRESPTHRRTDSASSSSTHSRDGQGEQLSPGRDSLEDESPYGENR
DLPLDKQKLAPVREEKGDPYMNQQKVLKLQTVPENTEVHLSRERFCDPTSTSMNSETTTT
SVTVPMKDSSPSPAPTPPRNGSSDGGKKMADMAEVIEARESKLIQLSKENNDLMETNSIL
RNQLQQLEESREMELEDVSKVSSEFANRIAESEKKLNTVIRERDSARKDLQKSHEEFSKR
VRGYELEAEEKDQQIAELLQEGEKLSKHQLQSNNIVKKLRAKEKENDSLLTSQKNQLDTQ
RKELEHLRTVCESKDAMEKKQTEGINQLNSAVQKQDREISKLKSELTDAQERVRGLQAAL
DNSYKEIAELHKSKAAQDSKVQETALSLEMSVREELKATLTKEQFSFKQEREALINQIED
LRMSMSRMEKEHNRREDMLRQEISDLQMHLQEDEARNQDVTQTVTTATRPLLRQIENLQT
TYAVQSSSWEKLEKTLTDRIVDIQTQLSVAVEKERSASENVIDLTSNVTALESQNCRLRQ
EKSQHVAQLEMLKTRVEVLEDAKNSETAQIEVLKHQMSQELSEVKKEKMFLESQLDMERT
KLDQEKKKMAITQDQIAQLEREIQRPQSRGSMSASPQNVQRMDSISSFSEPPALNTSFTQ
DDLDRNFLLSPGSSGLVSLSKSSLYENVRHSGAANLLENLQSQLKLREGEIVQLQSDIQQ
LERTRESMARELVNLTNQNEDLKAKVESLPEIKIQMQDLNQRYNAMLQMYGEKVEEAEEL
KMDLHDVKEMYKTQIDHLLTK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtggaatgctagtagcttttcagaccttgcctctcaggcaatcaaaaatgct
cagaagaaaatcgacaaagttcttgatattgacgaggaaggactccaacaaccaaaagca
tcatctgtagtcaaaccttcaaagaaagaaacaccttcgtcagaaaagaaaaatgatttc
tggaacacgtggatgcccgcgccccagtctgacgaggctgagggagggacggaagaggaa
aaggctagaagttcctggtcgatgccttggggttcaactcatcaggatatagaacctgag
gcaaaatccgaaagccaaaccacggctgaaaataagtcaacgaaaccgaaattaaaagtg
tcgtctgcaggacaacagtccagttctagtcagaaaggacagggtaaaacttcaaaacgt
acttcagataagatagccaaaagtagctctgatgacaataaaaagtcagtcgggaacatt
cctgttgttgagagcaaagagaaagtggagaactgggattcatcatccgcttgggcaagt
gattcacttatacaatggcaaggtgaaggacatcaggatgtaggcggtgatcttgaatct
gagggtcaatcacaacagcatgaatcattaaaagtcagttcaattttagaatcacaaaac
tctgaaaaagctgatattagtcctgaacatgtggatgacaggacagtgaaaacagacgaa
gaagttgattcgaaaaaagacaaattagtgaagtcatcgccagaggatgatactcttgct
tcgaatagtgataaaggacttgataaagatatttctgatacgctttcagatgataaaagt
gctgactgtaagacagacaagtctagtagcatctctgtgatcgaatcgacagaaggagtt
atctcccttagtgacgatagtgatcaagatgggaagcccagtgtaaataaatcggatgag
tccagtagtgtgcagcttctacaggccgactcagaagagaagattcactctgatgaactt
ctagaagaggatgacaaatatgcagtagatttagataatgttgtgattgagccaagtgtc
aatcaagtttcagagtctgctttgacctctgtgatagaacaggaagtcaaagaggatcca
tccgccacagaaacagagtctgaattagtgatacgtgaaaatgttaatgctgaaaaacag
gaagcatcaagtgatttgacttcatacagtacagaggagaaggattctgaaactcaaaaa
gaagagtcgagagacttaagtgaatctgttagtgattcgggtagtatgatgacaaaaagg
gatttgaaggaaatcgatagtgataacattctggcccagtcctcgatttctagtgggtcg
ggtgaaggtcaaggggacgaagggattaaagataatccaattactgaaacagatgtgtta
gaaagtttagcaagtgtgcatagtccgtctacatgtagttctgtgtgttcatcagacacc
agtaaattggacagtagtatggacactcacacctctgaggacacggttgtggataatcgc
ggagaggaggaagtgttaggggaggtaactcctgaagaacagatcagtgcaaaggaagtt
tcttcggttgaatctattgctagcatgaaaacattggactcgagtcaagtttgtccagag
gaaagtgaaagaagggactccacagaatttcaagacgattctcgtaaaattacagatagt
atgttcagtgtgtcgtccagtagttcgtatgtgaagtgtatgatagaagaggctatggaa
gacaacgggagaagtgaagacaacaacagcgactgtcactcgacaggaggtgaaaaatct
gagtgttcaaggagcacgggcggacatgaatcgggggatgaaattgacaccacaacatcc
tcagacattgaaatcatttcaacaccaaattctattaacaacggtgatcatactaacaaa
atggtggatttgtcaccactgaaaattgcgttgcagaaaacggctcgacgagagagtccc
acccaccgaaggacggacagtgcatcgagctccagcactcacagtcgcgacggacaaggg
gaacaactcagtcccggacgagatagccttgaggatgaaagcccgtatggtgagaacaga
gatcttccactagacaagcaaaaactggcacctgtccgagaagaaaaaggcgacccttat
atgaaccagcagaaagtgttaaaattacagaccgttcctgagaacaccgaagttcatctg
agtcgagagagattctgcgatcctacatctactagcatgaactctgagactacaactact
agtgtaacggttccaatgaaggactcttctccttctcctgctcccactccgccccggaat
ggtagctctgatgggggtaagaaaatggctgacatggcagaagtaattgaggcgcgagag
tctaagcttattcagctgagtaaggagaacaacgatctgatggagaccaatagcatatta
cgcaatcagttacaacagcttgaagaatctcgggaaatggagctggaagacgtcagcaag
gtctcatcggagtttgctaataggatcgccgaatcggagaaaaagcttaacactgtgata
cgggagagagattcagcaaggaaagacctacagaaatctcacgaggaattctctaaaaga
gtccgaggttatgaattagaagcagaagaaaaagatcaacaaatagcagaattattacaa
gaaggtgaaaagttatcgaaacatcagttacagagtaacaacatcgtaaagaagttacga
gccaaggagaaggaaaacgacagcctcttgaccagtcaaaaaaatcaacttgatactcaa
aggaaagaactggagcatctcaggactgtgtgtgagtccaaagacgcaatggagaaaaaa
cagacagagggtataaatcagctgaactcagccgtacagaaacaagacagggagatatca
aaactaaagagtgaactgaccgatgcccaggagagagttagaggtttgcaggcagctcta
gacaactcctataaagagattgcagagttacataaatccaaggctgcccaggacagtaag
gtacaggagacggccctaagtctggagatgtccgtcagggaggaactcaaagcgaccctc
accaaggaacaattcagctttaagcaggagagggaggccctaattaatcagattgaggat
ctgagaatgagtatgtcacggatggagaaagagcacaatcgaagagaagacatgctgaga
caggaaatttccgacctacaaatgcatctacaagaagatgaagccagaaatcaggatgtg
actcagacagtaaccacagcgacccgccccctactgaggcagatcgagaatcttcagact
acttatgcagttcagtcttcatcctgggagaaactggagaaaactcttaccgacaggata
gtggacattcagacacagctatcagttgctgtagagaaggaaagatcagctagcgagaat
gtgatcgacctcacgtcgaatgttactgccctcgagtcgcagaattgtcgcctacgccaa
gagaaatcacaacatgttgctcaactcgagatgttgaagacacgtgtggaggtgcttgag
gatgccaaaaatagtgaaactgctcaaattgaagttttaaagcatcaaatgtctcaagaa
ttatctgaagtcaaaaaggagaagatgtttctggagagccagctggacatggagaggaca
aagttggaccaagagaagaagaaaatggcaataactcaggaccagatagcacaactggag
agggaaatccagagacctcaatccaggggatcaatgtcagcatctccacagaacgtccag
agaatggacagtatatcaagttttagtgaaccgcctgccctcaacacatcttttactcag
gatgaccttgaccggaacttcctgttgtcccccgggagtagcggactggtgagtttgtcc
aagtccagtctatatgagaatgttagacacagtggtgcagccaaccttctagaaaactta
cagtcacagctgaaactaagagaaggagagatagtacagttacagagtgacatccaacag
ctagagaggacgagagaatccatggcgagggagcttgtcaatctgaccaatcaaaatgaa
gatctaaaggccaaagttgagtctttgcctgaaatcaagatccagatgcaggatctaaac
cagagatacaatgccatgttacaaatgtacggggagaaagtggaggaagctgaggaactt
aagatggatctccatgacgtcaaagaaatgtacaaaactcagattgaccatttacttaca
aagtga
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