Argopecten irradians (bay scallop): 138324857
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Entry
138324857 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase parkin-like
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
airr04137
Mitophagy - animal
airr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138324857
04120 Ubiquitin mediated proteolysis
138324857
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138324857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138324857
04121 Ubiquitin system [BR:
airr04121
]
138324857
03029 Mitochondrial biogenesis [BR:
airr03029
]
138324857
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
138324857
Membrane trafficking [BR:
airr04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
138324857
Aggrephagy
Other aggrephagy associated proteins
138324857
Xenophagy
Other xenophagy associated proteins
138324857
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
138324857
Mitochondrial biogenesis [BR:
airr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
138324857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR
IBR_1
ubiquitin
Prok-RING_4
Rad60-SLD
zf-C3HC4_3
GABP-alpha
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
138324857
NCBI-ProteinID:
XP_069126161
LinkDB
All DBs
Position
1:complement(33219258..33229100)
Genome browser
AA seq
445 aa
AA seq
DB search
MLPRTRIEPVGLLFSTLRNRTGLQMSSILLNVKFSSSCSCSVEADIESSILDVKSILSEK
LQIPTEEIQIILAGRILDDKSTIKDLCISNCSVLHAFTQKPPQLDIKVGEISASGATSVT
HTGVKNGEPNYQYFVYCKDCECLRPGKLRVRCLSCRSGHIVLSRDPDNFDDVLKRGRILG
ECKSEQCDGQEREVNFYFKCTGHQSEEGETAAVLKHVRPNRKRRTCVVCSEIESPIMVFP
CERRHIICLDCFKSYGVVRLNERNFTEDEEIGYSLPCPVGCPESLLEDGHHFYLLGTDQY
ERYKNFATEEYVLQNGGMLCPAVGCGSGFILSEASRKVTCPTCQYAFCGECKVEYHEDPD
CQAVMPQEASSQNLNVSEEQEMRARWDLESLETIGRISKPCPNCKTKTEKAGGCMHMSCS
RCYFEWCWMCEKEWTRDCQGNHWFG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagaacacgcattgagcctgttggactgttgtttagcactttaaggaatagg
actggtcttcagatgtcctctattctcctcaatgtgaagtttagttcctcatgctcctgt
agtgtagaggcagacattgaatcaagtattcttgatgtgaaatcaatcctgtctgaaaaa
ctacaaattcctaccgaggaaatacagattattctcgcaggaagaatcttggatgataaa
tcaactatcaaggatctctgtataagtaactgttcagttctacatgccttcacacagaaa
ccaccacagttggacataaaagtgggagaaatctcagcaagtggtgcaacaagtgtaaca
catactggagttaagaatggagaacctaactaccagtactttgtctactgtaaagattgt
gagtgtctgcgtccaggaaagctgagggtccggtgtttatcgtgtaggagtggacacatc
gtcctgtccagggatcctgataactttgatgatgtattaaaacgagggcgtatcctagga
gaatgtaaaagtgaacagtgtgatggacaggaaagggaagtgaatttttacttcaaatgt
acaggacaccaaagcgaagagggagaaactgctgcagtgttaaaacatgttcgtccaaac
aggaaacgcagaacttgtgtcgtgtgctcagaaatagaatctcctatcatggtgttccca
tgtgaacggcgccacattatctgtctggactgcttcaaatcctatggtgttgtgaggctg
aatgagaggaatttcaccgaggatgaggaaataggctacagtttaccatgtccagttggg
tgtccggaatccctgctagaagatggtcatcatttctatcttttagggactgaccagtat
gagcgttacaagaactttgccacagaggaatatgtactacagaatggaggcatgctctgt
ccagctgtcggctgtggatcaggatttatcttgtccgaggcatctcgaaaggttacctgt
ccaacttgtcagtatgccttctgtggagagtgtaaggtcgagtaccacgaggacccagac
tgtcaggctgtgatgccacaagaggcttcttcacagaacttgaacgtgagtgaagaacag
gagatgagagccaggtgggacctggaatcgctggagacgattggtcgtatttctaaacct
tgtccaaactgtaaaacaaaaacagaaaaagcaggtggctgtatgcatatgtcttgttct
cggtgttattttgagtggtgctggatgtgtgaaaaagaatggacaagagactgccaaggc
aaccattggtttggatga
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