Argopecten irradians (bay scallop): 138324938
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Entry
138324938 CDS
T10542
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138324938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138324938
Spliceosome [BR:
airr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138324938
Complex C
U4/U6.U5 tri-SnRNP related factors
138324938
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138324938
NCBI-ProteinID:
XP_069126313
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All DBs
Position
6:10001798..10011811
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AA seq
349 aa
AA seq
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MANRTVKDAHSVKGTNPQYLVEKIIRTRIYECRYWKEECFALTAALLVDKAMELKYIGGI
YGGNVKPSPFLCLVLKMLQIQPEKDIVVEFLRNENFKYVRALGAFYMRLTGSSLDCYKYL
EPLYYDYRKLKRQNKEGGFELIHMDEFIDELLREERVCDIILPRIQKRTVMEESNSLDPR
VSALEEDLENMDTSDDEEAMHERSPSPERRRGNYKDVDRPNRSPSPRYARSPSPHSRSNR
KRSRDRDRDREKRHRSPEKSRHRDNDDDRRRKHKKHKHDHKDHRDRHHKHSDDSDRRHKH
SDDRDRDRDRHRHRDRDRRDKHDSGLSQKELEIKEANEQRAKLGLPPLK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaacagtgaaggatgctcattcggtgaaagggacaaatcctcaatattta
gtcgagaaaatcatcagaacaagaatttacgaatgcagatactggaaagaagaatgtttt
gcactgacagctgccttgttggtggacaaggcgatggagctgaaatacattggaggtatc
tatggagggaacgtaaaaccatctccatttttgtgtctcgttctaaagatgttacagatc
caacctgagaaagatattgtcgtggaattcctcagaaatgagaacttcaagtatgttcga
gcactaggagcattttacatgcggctgactggatcatcgctagactgttataaatactta
gagcccctatattacgattacaggaaactgaaacgtcaaaacaaagagggtggttttgag
ctgatacacatggatgaattcatagatgaattactgcgagaggaacgtgtctgtgatatc
atcttgccaagaatccagaagcggacagtgatggaggagagtaactcactagatcctcga
gtcagcgctctggaggaagatctggaaaacatggacacctcagatgatgaggaagctatg
catgaaaggagtccttcaccggagagacggagaggaaattacaaagatgtagacagacct
aatcgaagtccttcacctcgatacgcccgcagtccgtcaccgcacagcagatctaatcgt
aagcgttctcgggacagagacagagaccgggagaaacggcacagatctccagagaaatcc
agacatcgtgacaatgatgatgacagaagaagaaaacacaaaaaacacaaacacgaccac
aaagaccacagagatcgccatcacaagcactccgatgatagtgaccgtcgtcataaacat
tcagatgaccgtgatcgtgaccgtgatcgccacagacaccgggatagggatcgacgggac
aaacacgacagtggactttcacagaaagaactggaaattaaggaagcaaatgaacagaga
gcaaaacttggtctgccacctttaaaatag
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