Argopecten irradians (bay scallop): 138325341
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Entry
138325341 CDS
T10542
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138325341
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138325341
03041 Spliceosome [BR:
airr03041
]
138325341
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138325341
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138325341
Spliceosome [BR:
airr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138325341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138325341
NCBI-ProteinID:
XP_069127036
LinkDB
All DBs
Position
1:complement(34673736..34737882)
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AA seq
622 aa
AA seq
DB search
MSEKTPTKAATPVKKDTTENKTPTPNKNKPPQDGNKHQDHPPNRGGRGGGHHHGGDRGGH
GGQRRGGGGGGGRGRFNNNRNFSQGGGGGERHSNMQHKKQQDQESTEESSGPKEDLKFTG
RCRLFVGNLTPDITEDEFKAMFTKYGEISELFVNGSKGFGFIRMDYRNNAEAAKAALDGT
QRKGRSLRVRFANHGAAVRVKNLSPFVSNELLHQSFSQFGDIERAIVCVDDRGRSNGEGI
VEFARKPGASQAMKRINEGVFLMSAYPRPVFVEPLEQKDEEDGLPEKFLPRNEHCRKDRE
KEPRFAPPGSFEFRFAQRWKELDELEKQQHERVKKEMEEARVKLEAEMEGAMYEFQAEQI
RADLLRQQEELQRIEEMRQEQMRRRQEMDMRNGNNFRRQEENRMVREEEERRREMIMRGD
AGGMRGGRGPMDRGNQMDQGMRGDSMRGDGMRGEGGMRGEGIRGEGMRGDGMRGEGQRGR
SGGPPPVPPPPAPPAAMGIENRQQNEGSMGGGFGGSGGNQGSMQGQGQGMGGQGQGMRQS
RFDQQGGNYGGGNFGGRGGMGGQGGGMGGGNGGGGMQGGNMYGGGGMGGNMGGGRGGMNE
RRRQEAGGPRDDYGDMKRMRRY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaaaacgccaaccaaagcggccacgccggttaagaaagacacaacagaaaac
aaaacaccaacgccgaacaaaaacaaacctcctcaagatgggaataaacatcaagatcac
cctccaaacagaggaggccggggaggtggccatcatcatggcggtgatcggggtggacat
ggaggccaacgccgtggtggcggaggagggggaggccgaggaagatttaacaataatcgt
aacttttcacaaggtggagggggcggagaacgccactctaatatgcaacacaaaaaacaa
caagaccaagaatctactgaggaatcttctgggcctaaagaagacttgaaattcacagga
cgctgtcgactcttcgtcggcaacttgacacccgacataaccgaagatgaattcaaagcc
atgtttacaaaatatggtgaaatatcagaactgtttgtcaacggctcaaagggatttgga
ttcattcgtatggattacagaaataatgctgaagcagcaaaggctgctttagatggaaca
cagaggaaaggccgcagtctgagagtaagatttgccaatcacggtgctgctgtccgcgtg
aagaacctgtctccatttgtatccaatgaactgttgcatcaatccttctcccagtttggc
gacattgaaagagccatcgtttgtgttgatgatagaggcagatcaaatggagagggcatt
gtagaatttgctaggaaaccaggtgccagtcaggctatgaaaagaatcaacgagggagtt
tttctgatgtccgcgtacccaagacctgtgtttgttgagcctttggagcaaaaagatgaa
gaggatggtttgccagaaaagttcttgccaagaaatgagcattgcagaaaagatcgcgaa
aaggagccaaggtttgccccacctggatcttttgaattcaggtttgcacagagatggaag
gaactagatgagcttgagaagcaacaacatgaaagagtgaagaaggaaatggaagaagca
agggtcaaattagaggcagagatggaaggtgctatgtacgaattccaagctgaacagatt
agagcagatttgttaagacaacaagaagaactccaaagaattgaagagatgagacaggaa
cagatgaggcgcagacaagaaatggacatgcgtaatggcaataatttcaggcgccaggaa
gaaaaccggatggtacgagaagaggaggaaagacggcgtgagatgataatgagaggagac
gcaggtggtatgagaggaggacgaggaccaatggatcgtggcaatcaaatggaccaggga
atgcgcggtgacagtatgcgtggagatggtatgcgaggtgagggaggaatgcgtggagaa
ggcattcgaggtgaaggaatgagaggcgacggtatgaggggtgaaggacagcggggtcgt
tctggtggacctccacctgtaccaccacccccagcccctcctgctgctatgggtatcgaa
aatagacaacaaaatgagggatccatgggtggaggatttggaggatctggtggcaaccag
gggtcaatgcaaggtcaaggacagggaatgggaggtcaaggtcagggaatgcgtcagtca
agatttgatcaacaaggcggaaactatggaggcggaaactttgggggtcgcgggggtatg
ggaggccaaggtgggggcatgggcggaggaaatgggggtggaggtatgcagggtggtaac
atgtatggaggcgggggtatgggtggaaatatgggaggtggccgtgggggcatgaatgaa
cgcaggcgtcaggaagctggaggaccccgcgatgactacggagacatgaagagaatgcgt
cgctactag
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