Argopecten irradians (bay scallop): 138325685
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Entry
138325685 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138325685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138325685
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138325685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TPR
FKBP15
ATG16
GAS
KASH_CCD
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
138325685
NCBI-ProteinID:
XP_069127606
LinkDB
All DBs
Position
6:complement(33640029..33704677)
Genome browser
AA seq
2356 aa
AA seq
DB search
MAVVRSVAELLDLLKAETISDNLTEQITTFIGLKDNTIDELKTKYEKLRVDAEQKYFDIE
QQLFTTSSKLETESVANEKHKDIIENLEKKYHEAETKRKSLQESQDSSLSTNLRLSKSNE
LLEQDMRDLSILLEKRNKEIDRINEEWKELTEKVSRANTEKCEAQAKLAEVQNQSVTLEF
QNKRLAQEKSQIQSQLDLLDKQLSEKTNELLNVKKEQTASLLETQSRLEEKVGENNLLQA
TVETLKLSQEEQATKIDSLIQKLKDSRNGMAQLEDQFNQELQAKSRLIDLYKTSKEEAES
KVKELASAVEELRTLLKEAATAHTELEDLKDEEAKHFRADIDSRDETIEKLRQELVNAND
LLDQTKNRIASEDQVESMFPKAAITGKALKSGMSLTQIYNEYVQASDALMQAKEENQHLN
QSLNQILQEIEEKSPLLKKQRQEYENSLSSIEQLTRQLDMSMLESQNLRVEADKINIKYN
HMQRENQKLQLQTNDLSKQLRYTLKENCELRGGRVVKEVTQSSPDVSSASKVITDKLVTF
SNIEELQFQNIRLLTVLRDLSEKQEEEEKMATDSKTKELQNQLEIANSEIQELKSSREKQ
MKMVETIVRQRDLFKVLNQSGMGMPATMSMTDGDDISMITPVKKSPVKQSSDKALQDMKT
ALTQLQEDFNNYKKEKKENEKIMEEELEKYRNNLSSMTVQNAKMSSQVDYSAEKYKVLQG
NAEGYRKEIAALRDKVQKYSASVAKHEHTINLLRQDLMSSKENFARADTRAQNLRIEKEL
LKQSEQRLLQDIESMRRERHSQAMLMANLEAIKNNIERSESETRNRYTNKIDAIEMENSN
LTRKLHSAQDEQKTITSIFESQIKEIRGQLEQELSNHEADKKNIRTLQHELEGVKGQLGA
AEAKLASAEARLANSSTNLTDSAGVNTETLSDELKDLQSQLEQSQHTVSSLRDQLEKSQD
HVANYKAIADGLQKNIDEQAMANNQYEQKFEEMLEAKKHAEKRTDDLEKEHQALLNENIR
VSEESHELNADLRKQLARLQNELQEAVQRREEAIAKEEKAIQENRSQTNLASEVQDKYQR
ELILHAADVEALTAIKKQMEEYNEKFATEQECRIKAEKVLEESKGSWLEQEKMIKNENTR
LQKRVQDLAQQNNLLHQQIEKMSRDVVAVQQAVAHNESFSSSTEDTTKSSEQLLEVVKFL
RREKEIAETKLEIVQSESKTVRQQLERVQRSLEEANEAMREEREHSQTNLQTAAQHAELM
RKVENLNLLTDSNRLLRDEKNKLEQQVATLEAKMVTLEQSIDPLQTSVRDSQSHRDALGA
ERDALRSEVERWKSRTNHLIEQANRTDPEEHRKLIQEKETSRKEVIRLTEENHRTRAEVS
RLTNSLTMSQRESNTSKQEIEKLQRELNASKQETEKFQKEVTAKVTESEAKDNDIEEKTK
TINQLKKIGRKYKEQAEAVRKEFDDFQAQQAAKNQEPAPPSTEAIEQAVAPVQEKLTAIE
KERDELKQKLEQTANEANTTKEQSSKLQQELTQSQEETTKVKEENVEYEKKLNQSRNVLQ
AAKKKIGSQNEHIEKVTAEVNDLKQKLSAAEKQKMSASERLKGDVEQRVLAVRSEMEEKL
TKMENELSEMKAMKESELQSVIQRAQEENAELQNKIQQLLKQMESQQTKSVPPQPQVARP
SAAVTVERVSAPTSEAPKTANIRPMASPVPVTPRTQPAQIQPQSAATKATASIRPMAIAP
TTVAPSSGPTPTATVMPTTVSVQENQESSQVSQLSPALARPTQHVQRVTPQVETGTEQAT
VTETEIVSSQPETIAVDPQPSTSATSYDSQSTSTQLKRSRDDMEGHDEESDTKRTRVSPE
QQALPSITVTDEHANTMSIPDQGGMSTQDPEVTGSEGPSDSLQTQIFESSLEQPYDSQAT
VCFDSQQSQDEMTQMVEDKNEMEEEDDDDDAVIVVESDEEDDEEAEDYEEDDDNDGYNDD
MGEYDEDEDDDDDDPIQDDDYQEEGQDEAGEEDYQSEAQQGEIHGPGDEGDDEVVIVDDE
DNDNQMEPQEPEMPPVPQVVAPSVQTPITQRSQLPFQGIERQVSCTRTQLAPFVLAGHTG
GFEDGEDCIVPSTPTLFVPNRGDGGFAEAVSSPQIPHQRFTFTSNTEAMAHHDLGQLESQ
EALGMDDTQVDLSQLEEGQGHSVPTTPIQQAPTATTSADSIDPVPVASEDVLTTDSGPDS
LTTDTAGESSQEPSSSLGKVETLEVGGQESESVTAGPSSSTGDTQSASEKSDPGKAKKIQ
PIVWEQTGMPIQTTTSHTPPTQHTRGRGGTRGVGQTRGIMQHPRGHRGYSRPRAPTSRGT
RIMRTGRGGNYRPPMY
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgttcgatcagtcgccgagcttttagatttattaaaagccgagactatatcg
gacaacttaacggaacagataacaacattcattggtctaaaagataacacaatcgacgaa
ttaaagacaaaatatgagaaacttcgtgtggatgcagaacaaaaatattttgatattgaa
caacagttgttcaccaccagcagcaagttagaaactgagtcagtcgctaatgaaaagcat
aaagacataattgagaacttggaaaagaaatatcatgaagcagagactaaaagaaaaagc
ttacaggaatctcaagacagctccttatctacaaatcttcgtctcagcaagtcaaatgag
ctgcttgagcaagacatgagagatctgagcatcctactagagaagaggaacaaggagata
gatagaataaacgaagaatggaaggaattgacagaaaaagtgtcacgagccaacacagaa
aagtgtgaagcacaggctaaacttgcagaggttcagaaccagagtgtgacattggagttt
cagaacaagcggctggcacaagagaagagccagatacaaagccagctagatctgttggac
aaacagctttctgagaaaacaaatgaactacttaatgtcaaaaaggaacaaacagcaagc
ctgctggagacccagagcaggctggaagaaaaagtaggagagaacaaccttcttcaggca
actgtcgaaactttgaagttatctcaagaagagcaagctacaaagattgacagcctaata
cagaaacttaaagattcgaggaatggaatggcacagctggaggatcagtttaaccaggag
cttcaggccaagagccgtctcatagatctgtataagacatctaaggaggaggctgagagt
aaagtgaaggagttggctagtgctgtcgaggaactgaggacactgttgaaggaagctgcc
actgctcatacagaacttgaagacttgaaagacgaggaagcaaaacacttcagagccgac
atagacagtagagatgagacaattgagaagctgagacaagaactggttaatgctaatgat
cttctggatcaaaccaagaacagaattgccagtgaagaccaagtagaaagtatgttccct
aaagctgctattacaggcaaagctctcaaatctggaatgtccctcacacagatttacaat
gagtatgtccaggcctctgatgctttaatgcaagcgaaggaagaaaatcagcacctcaac
cagtccctaaatcaaatccttcaggaaatagaggaaaaatcaccattactaaagaaacag
cgacaggaatacgagaattctctgtccagcatcgaacagctgacgaggcagttggatatg
tcaatgttggaatctcaaaatttacgagtggaagcggacaagatcaacattaagtataac
cacatgcagagggagaatcagaaactacagcttcagaccaacgatctgtctaaacagctc
cgctacaccctgaaagagaattgtgagttacgaggcggacgtgtggttaaggaggtaaca
caatcgtcaccggacgtcagcagtgcctccaaagtaatcaccgataaactggtcaccttt
agcaacatagaggaactgcaattccagaatatacgtctgttgacagtattgcgagatctt
agcgaaaaacaggaagaagaagagaagatggcaaccgattcaaaaacaaaggagctacag
aatcaacttgagattgccaattcggagatacaggagctgaagtcgagtcgagagaaacaa
atgaagatggttgaaactattgtccgacagagagatctatttaaagtgctgaaccagtca
gggatgggaatgccggcgaccatgagtatgactgatggagatgacataagtatgatcacc
cctgtaaagaagtctccggtaaaacagtcttctgacaaggccttacaagacatgaaaact
gccctcactcaactacaggaggactttaacaactataagaaagagaaaaaggagaatgag
aaaatcatggaagaagagcttgagaaatacagaaataatttatcctccatgactgtccag
aatgccaagatgtcttcacaggtagactattccgcagagaagtacaaggtattacagggt
aatgcagaaggctacaggaaagaaatagccgccctgagggacaaagtccagaagtactcg
gccagtgtggctaaacacgaacataccatcaaccttctcagacaggatctgatgtcatcc
aaggaaaattttgcccgtgcagacactcgagcacaaaatttacgtattgagaaagaactg
ctcaagcaatcagagcaacgtcttctacaggacatcgagtcaatgaggcgtgagagacac
tcgcaggccatgctcatggctaaccttgaggccatcaagaataatatcgagcgttctgaa
tctgagacgaggaacagatacactaataagattgatgctatcgagatggaaaacagcaat
ctaacgaggaaacttcactcggcacaggacgaacagaagaccattacatctatcttcgag
agccaaattaaagaaatccgtgggcagttggaacaggagctctcaaaccacgaggcagac
aagaaaaacatccgaacattacagcatgaactggaaggagtaaaaggccagttgggagct
gctgaggctaagctagcgtctgcggaggcgagacttgccaattcttccaccaatctgaca
gactccgctggtgttaacacagagacccttagtgatgaattgaaggatctacagtctcag
ctggaacagtcccagcacactgtcagctcgcttcgagatcaactagagaaatcccaggat
catgttgctaattacaaggccattgctgatggcctgcagaaaaacattgatgaacaggca
atggcaaacaaccagtatgaacagaaatttgaagaaatgttggaagcaaagaaacatgca
gaaaagaggacagacgatttggaaaaagaacaccaagctctactcaacgagaacatccgt
gtatcggaggaaagccacgaactgaatgctgatctgaggaagcagctggctcgtctacag
aatgaactacaagaagctgtacaacgacgagaggaagccattgccaaggaggagaaggca
atacaggagaatcgttcacaaacgaacctggcctcggaggtccaggacaagtaccagaga
gaattaatattacacgcagctgatgttgaggccctgacagccatcaaaaaacagatggag
gaatataatgaaaagtttgctacagaacaggaatgtcgtatcaaagccgaaaaagtgctg
gaggagtccaagggatcttggcttgagcaggagaaaatgatcaaaaatgagaatacacga
cttcagaagagggtccaagacttggcacaacagaacaatcttttacatcagcagatcgag
aagatgagtcgggatgttgtggctgtacaacaggctgtcgcccataacgagtcgttttca
tcaagtactgaagacactacaaagtcatcagaacaactgttggaagtggttaaattttta
cgtcgtgaaaaggagatagcagagactaaacttgagattgtacagtcggagtccaagacg
gttcgccagcagctggagcgtgtacagcggtccctggaggaagctaacgaagcgatgcga
gaggagagagaacattctcagacgaacctacagacggcagctcaacatgccgagttgatg
agaaaggttgagaatcttaaccttttgactgacagtaaccgattactgagggatgaaaaa
aataaactggagcagcaggtcgccaccctagaggccaagatggttaccctggagcagagc
attgaccccttacagacaagtgtgagagactcgcagtcccatcgtgatgccctgggggca
gagcgagacgctctgaggagtgaggtcgagagatggaagtctcgtacaaaccacttgata
gagcaggccaacaggacagatccagaggagcacagaaaactcattcaggaaaaggaaact
agtaggaaggaggtgattagactgactgaagagaaccatagaacaagagctgaagtatcc
agactcacaaacagtctcactatgtcacagagagaatcgaataccagcaagcaagaaata
gaaaaactgcagagagaactgaatgcaagcaagcaggaaacagagaaattccagaaggaa
gtgacagctaaagtgactgaatcagaagcaaaggacaatgatattgaggagaaaacaaag
actatcaaccagctgaagaaaatcggacgtaaatacaaggagcaggcagaggcggtacgt
aaggagtttgatgacttccaggcccagcaggcggccaagaatcaggaaccagctcccccc
agtaccgaggccattgaacaggctgtggcacctgtccaggagaagctcacagccatagag
aaggagagagacgagttaaaacagaagttagagcagacggcaaacgaggccaatacaaca
aaggaacagtcctcaaaacttcaacaggagctgacacaaagtcaagaggagacaactaaa
gtcaaggaagaaaatgtggagtatgaaaagaaactaaaccagtcacgaaatgtcttacaa
gcagcaaagaaaaagattggttcacaaaatgaacatatagaaaaagttacagcggaagtg
aacgatctcaaacagaaactgtcagcagctgaaaaacagaaaatgtcagcatcagaaaga
ttaaaaggtgatgtagaacagagagtgttagcagtacgctcagaaatggaggaaaaactc
accaaaatggagaacgaactgtcagaaatgaaagcaatgaaagagtcagagcttcagtcg
gtcatacagcgggcacaggaagaaaatgctgaattgcaaaacaaaatacaacaactactg
aaacagatggagtctcagcagactaaatctgtaccaccacagcctcaagtagccaggccg
tcggccgcggtcacagtggagcgtgtcagtgcgcctacctctgaggcaccaaagacggct
aacatccggcccatggcttcccccgtacctgtcacaccacgaacacaacctgctcagata
cagccacagtctgctgccaccaaagccacagccagtataagaccgatggccatcgccccg
acaacagtggcaccaagtagtggtcctacaccaacggctactgtcatgccaaccactgta
tcagtgcaggaaaatcaagagagctcccaagtgtctcaactgtctcctgccctggcccgc
cccactcaacatgtacagcgggtcaccccacaggtggaaactggtacagaacaagccact
gttacagaaacagagatagtgagtagccagccagaaactatcgctgtggatccacaacct
tctacatcagctacatcgtatgacagccagtcgaccagcacacagctgaaacgttcacgg
gatgacatggagggacatgacgaggaatctgatactaaaagaacaagagtatcacctgaa
caacaggctctgccatctattactgtcacagacgagcatgctaacactatgtccatccct
gaccagggcggcatgtctacccaggaccctgaggtcacggggtcagagggaccctctgac
tccctacagacacagatttttgagtcgtccctagaacaaccatatgacagccaggctact
gtgtgttttgactcccagcaaagtcaagatgaaatgacacaaatggttgaggataagaac
gagatggaggaggaagatgacgatgatgatgctgtaattgttgtggagagcgatgaagaa
gatgacgaagaagcagaggattatgaagaagatgatgacaatgatggatacaatgacgat
atgggagagtacgatgaagatgaggatgatgatgatgatgaccccattcaagacgatgat
taccaagaggagggacaggacgaggctggggaggaggattaccagtctgaggctcagcag
ggggagattcatggccccggggacgagggagacgatgaagttgtcatagtagatgatgaa
gataatgacaaccagatggagccacaggaaccagagatgccaccagtgccacaagtggtg
gctccttccgtacagaccccaattacacagcgctcacaacttccattccagggcatagag
agacaagtgtcatgtacacgcacacaactagcaccatttgtactcgcaggccacactgga
gggtttgaggacggtgaggactgtattgtacccagtacgcccacactgtttgtacccaac
aggggagatggaggattcgcggaagccgtcagctcgccccagatccctcatcaacgattc
acctttaccagtaacacagaggctatggcccaccatgacctcggccagctggagtcacag
gaagctctaggaatggatgacacccaggtagatctatctcagctagaagaaggacaaggc
cacagtgtacctactactcctatacaacaagccccaacagctacgacttctgcagattca
atagaccctgttccagtggctagtgaagacgtccttacaacagacagtggtcctgacagc
ctaacaacagacacagctggagaaagtagtcaggagccgtcttcatcactaggtaaagtg
gagacattggaggtaggcggacaggagagtgagtcggtgacagcggggccatcatcttct
actggtgatactcagtcagcgtcagaaaaatctgatccaggaaaggctaagaagatccag
cctatagtttgggagcagacaggcatgccaatacagactacaacctcacacactccgcca
acacagcatactagaggacgaggtggcacccgaggggtcgggcagaccagggggataatg
caacatccccggggacaccggggctacagcaggccacgggcaccaacatcacgtggcact
cgtatcatgaggactggcaggggaggtaattaccgaccacccatgtactga
DBGET
integrated database retrieval system
