Argopecten irradians (bay scallop): 138325772
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Entry
138325772 CDS
T10542
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138325772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
airr03009
]
138325772
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
Pre-60S particles
RNases
138325772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Bacteriocin_II
Motif
Other DBs
NCBI-GeneID:
138325772
NCBI-ProteinID:
XP_069127759
LinkDB
All DBs
Position
6:complement(36821798..36835602)
Genome browser
AA seq
1275 aa
AA seq
DB search
MFRTAGYYRGVNCPFFASGLCERPYCHFRHVKQDHNEDLNNKPQTPSSSKDASSYLEKLS
DGQFPLTSESIRSFSKDKEEITDEKKSGKQAFNKYTGEPINDDEAELDISAGVSEVNKYT
GKPIEYNKYTGEPIYHTEDSSSVNKRWTDSVLGNSNTPTYNPTPLSELQKRNANPNVSKY
SLSASTSTSSQEYDPESNYSTSTKINHVPVPQVGRPSYKAKRSCSYDPSNATYKKPVLKR
QRVASFFDAKFSSDEEEEVSSKNKNKNDNGKDEKSVSSEKEDKFHLKDVNYFEKLLDGPK
DAKNSRVKVESDDSLDSLDEDVDVTPLIEKCRRRSQSGGTDQDSAEEKTEEKTKDLSKED
DSSHISTEIVSNTIKENCDSKDKKTKEKSGNDNRKSAEICDKNDKKNSASSSHSKSSHHR
TSKSLKENSSKSSQDNGNSIHKSTKESSSKSSHQGTSNSSHKSSKESSAKSLHRKTEHSK
LSHNREKNSHHPSSPKCQSLSVSKAEKVITKRKSRDSQDSKSSENENHVCDKSKDLSKSS
NHHHKHSKHSNSELSSSSHKHQSNSEKGLEKNASHNSSHSSGSSKGSKDKQNKAKQRDSK
EDNHKGTNSKSVSSDRRKSAESTKKKIVDINVDLFGADSEEEDDDDEDLVEVPMVTNDVN
HSEQDMVMFLNDSDYSDEDIDRYDECLRIFQENKGMVNSNNANKKKSSPEKSHDEKVPAA
PTGKQRMAHKKDSEMNRKMKMVEKPKVKMSPAEVMHNRFLQIQKKAQEAAAAAAAAKATS
SGNNETASSSTTKNPLSGTKKRTAHTPSTSKTNGKPAEKTLITTASRTEKRKARTPNISN
LVRPTIPSEFGSKVPYNVRQRYLNLIIDECLKICDSEQEAFDKGQVEEAAVYKRASSKTV
YLNVAVNTIKRLRSEQAGPSNAKKPKQTVFQLSHEQILGGKNATKTTFTVNRSGGGSKLQ
EENFKGAELYKRLTRYILTEEQMKENGFPRPSPSVSGSAVFFVEPRKKINVQSSKPTNYE
KLCVRCGKMFTVYPNGTYATKEECSYHWGKAWKKRIAGMIDTRYTCCQGDLSSDGCQISK
GHVHETNKWEALSGYMKTFPCSPPCDGDYGVFALDCEMVYTKFGIELARVTVTDPENECV
YETLVKPDAAVVDYNTRFSGLTEEDLKDVTTTLRDVQAVLLSLFSDRTIVMGHSLESDFS
AVKLLHNTVVDTSVVFPHKMGPPYKRALKTLMAEYLKKIIQDDVGGHDSKEDSTSCMELM
HLKIKEDARKEPRRS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcactgccggttactatcgtggcgtgaattgtccattctttgccagcggactt
tgtgaacgcccgtattgtcactttagacacgtcaaacaagatcacaatgaagatctaaat
aacaaaccacagacaccgtcatcatcaaaggatgctagttcctacctggaaaagctatcg
gatggccagtttccattgactagtgaatctatcaggtcattctccaaggataaagaagaa
atcactgatgagaagaaatctgggaaacaagctttcaacaaatatacaggtgaacccata
aatgatgacgaagctgaacttgacatttcagctggtgtaagtgaagttaataaatataca
gggaaacctatagagtataacaaatacacaggggaacctatttaccatacagaggactca
tcgtctgtcaataaaagatggacagattcagtgttgggaaatagtaatacccctacttat
aatccaaccccattgagtgaattacaaaagagaaatgcaaatccaaatgtgagtaaatat
tcattgtctgcaagtactagtacttctagccaagaatatgacccagaatcaaactattcc
acctctacaaaaatcaaccatgtgccagttccccaagtcggtcgtccatcatataaggcc
aagaggtcttgtagctatgatccttcaaatgcaacatataaaaaaccggttctcaaaaga
caacgtgtggcatcattctttgatgcaaagttcagttccgatgaagaggaggaagtaagt
tcaaagaataaaaataaaaatgataatggaaaggatgaaaaatccgtttcaagtgaaaag
gaggacaaatttcatctgaaggatgttaattactttgaaaagcttttagatggaccaaag
gacgctaaaaatagtcgtgttaaagttgaaagtgatgattcattggattctctagatgaa
gatgttgatgtcacaccattgatcgaaaagtgcaggagacgttcacagtcagggggtact
gatcaggacagtgctgaggagaaaacagaagaaaagacaaaggacttgagtaaagaggac
gatagttcacatattagcacagaaattgtttctaatacaattaaggaaaattgtgattcc
aaagacaaaaagacaaaggaaaaatctggcaatgataatagaaaatctgctgaaatttgt
gataaaaatgacaagaaaaatagtgcttcatcatcgcattcaaaatcatcacatcacaga
actagcaaatcattgaaggaaaattcatcaaaatcttctcaggacaatggaaattcaatt
cacaaatccacaaaggaatcatcatcaaaatcttctcaccaaggaactagcaattcatca
cataaatcatcgaaagagtcttcagcaaaatccttgcatagaaaaactgaacatagcaaa
ttgtcccataatcgtgaaaagaattctcatcatccatcatcaccaaagtgtcaaagtttg
tctgtgtctaaggccgaaaaggtcataaccaaacgtaaatccagagattctcaagacagt
aaatcatccgaaaacgaaaaccacgtgtgtgacaaatcaaaggatttatccaaatcatct
aatcatcaccataaacattcaaaacattcaaactcagaattgtcgtcttcatcacacaaa
caccagtctaattctgaaaaaggtctcgagaaaaatgctagtcacaattcatcgcacagc
tcagggtctagtaaaggtagcaaagataaacaaaacaaagccaaacaaagggatagcaag
gaagacaaccacaaagggaccaactccaaatctgtaagttctgacagaaggaagtcagca
gagtctaccaaaaagaaaattgtagatataaatgtggatctttttggtgctgacagtgag
gaagaggatgatgacgatgaggatcttgttgaagttcccatggtaacaaatgatgtaaat
cattcagaacaagacatggtgatgttccttaatgatagtgactactcagatgaggacata
gatagatatgatgagtgtttgaggatatttcaggagaacaaggggatggtcaattcgaac
aatgctaacaaaaagaaatcatctccagaaaaatcacatgatgaaaaagtcccggcagct
ccaacgggcaagcagcgtatggcacacaagaaagattcagagatgaatagaaaaatgaaa
atggttgagaaacccaaagtgaagatgtcgccagccgaagtgatgcataaccgcttcctg
cagattcagaaaaaggcccaagaggctgctgcagctgctgccgctgccaaagctacaagt
tctggaaataatgaaacagcatcatcttcaactacaaaaaaccctttgtctgggactaag
aaaaggactgcccacaccccatctacctcaaaaactaacggtaaacctgcggagaaaact
ctcatcaccacagcgtcacgcacagaaaaacggaaagctcgcactcccaatatttctaac
ttggtaagaccaactattccatcagagtttgggagtaaggtaccgtacaacgtccgacaa
cgctatctcaatctcatcatagatgaatgtctcaaaatctgtgactcagaacaggaagca
tttgataagggccaggttgaggaggctgctgtctacaaaagagcatcgagtaaaacagtt
tacctcaatgttgctgtcaacactatcaagaggcttcgatcagaacaagctggtccatct
aatgccaaaaaaccaaaacagacagtgtttcagctgtcgcatgagcaaattcttggaggc
aaaaatgccacgaagacgacattcacagttaacaggtcaggagggggctctaagttacag
gaggaaaacttcaaaggagctgaattgtacaagaggttgactcggtacattttgacagaa
gaacaaatgaaagagaatggttttcctcgaccatctccaagtgtatctggctcagccgtg
ttctttgtggagccaaggaagaaaatcaatgtacagtcatccaaaccaacaaattatgaa
aagttgtgtgtgcggtgtgggaagatgttcactgtctacccaaacggaacttacgccacc
aaagaggagtgttcctatcactggggcaaggcatggaaaaaacgcatcgcaggtatgatt
gataccaggtacacttgttgtcaaggtgacctttcatcagatggctgtcaaatttccaag
ggccatgtacatgagactaacaaatgggaggccctgtctgggtacatgaagacgtttccc
tgttcaccaccatgtgatggagattacggagtgtttgctttggattgtgagatggtgtac
acaaagtttgggatagagcttgcacgagttactgtgacagacccagaaaatgaatgtgtg
tatgaaactctcgtgaaaccagatgctgctgtcgtagactataacacaaggttcagtgga
ttgacagaagaagacctgaaggatgtgacaactacgcttagggacgtacaagctgtcctt
ctcagtcttttctctgaccgcactattgtcatgggacacagtctggagagcgatttctct
gctgtaaagctactacacaacacggttgtggacacgtctgtggtgttcccacacaagatg
ggaccaccctacaaaagagcccttaagactctcatggctgagtacctcaagaaaattatc
caagatgatgttggtggtcacgacagcaaagaagattccacatcttgtatggaactgatg
catttaaaaattaaagaagatgcccgcaaagagccgagacggagctga
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