Argopecten irradians (bay scallop): 138325833
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Entry
138325833 CDS
T10542
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03020
RNA polymerase
Brite
Enzymes [BR:
airr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138325833
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138325833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138325833
NCBI-ProteinID:
XP_069127871
LinkDB
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Position
6:39031575..39075637
Genome browser
AA seq
1712 aa
AA seq
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MDTDIAVQRLEGLEFRFYLESEIQKLSVKEITNTQTFDALAHPCSGGLYDSALGPTDKDD
LCGTCGQNFVHCPGHMGHILLPLPVYNPVYFSTLCQILRGSCFNCHRMAVSSLPSILFVK
KMDLINKGLLAAAGELEEFVANQSEELGTNAAAEEVINRNIQDKMAAWLSDTGKLDEVST
VKNVEAFKNAEISHFIRYKLMVTSVTCPHCQNKKRLIKHENNVKFLLSGKRKVVEKTSVK
KGNEKQGKSKSKSNDDDSQMDISTTMLEEVEEETVKFDSSEQTYISPSQARDHLRLLWKQ
DKVILKYLFHSLSKTADDSPDIFFLQVIPVPPSRFRPVSMMNGRKFENPQTANLCSLLKD
ASNMRQLLEVIDRKSKKEDEVVEDEVTKGVLSQISGSSLMEKLQNCWIQMQNHTNSILDC
DLDKLTKDKCPGVKQLLEKKEGLFRKNMMGKRVNYAARSVISPDPCINTNEIGVPQVFAK
KLTYAQPVTPWNIQELRQMVINGPDVHPGACFVMNEDGFKTMLNAKDRTQREAVAKQLLT
PGANHLAYRECKKVYRHLKNGDVMLLNRQPTLHRPSIQAHKVRVLPGEKTLRLHYANCKA
YNADFDGDEMNAHFPQNELARSEAYTIASTDFQYLVPKDGTPLAGLIQDHMVSGVNITLR
GRFFTRQEYCQLVFSALVDIKGLVKTLPPSIIKPCKLWSGKQVLSTIILNTIPPGKAALN
LIGKSKIAEKSWLTSDPNVDLPKEVAEEMGESWVVIRGGELLCGVLDKGHYGPTPYGLVH
CSYELYGGGIAGKLLTYFGRLFTNFLQMMRGFTLGVEDILVTAPADKKRKKAIEESTLCG
DDSAKEALTLDKEANSATLLRAMKKAHYSSDDVELQMLDHSTKTRTDEVQNAIVKACMPK
GLEKLFPKNNLQLMVQSGAKGSSVNCMQISCLLGQIELEGRRPRPMLSGKTLPSFMAYDT
SPRAGGFVSGRFLTGIRPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGVYVNY
DLTVRDSDGSIVQFYYGEDGLDISKTGFITPKMYPFLLDNRSALTVQNTDQKDVNDKSVR
KWTKKIMKWRKNAKKKNYINERTSGFLNFCNESQLPASHDNTLDKNGRTIGACLMCNEWR
ALDDKAKQKYSKYCERCPDPAMALYFPYQHGGVFSEKFEAVVKNYAKKELKKAVKDESVG
PDEFNTMMKRKMMKCLAEPGEAVGALCAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRL
REILMVASANIKTPAMDIPVYPTPDARQKAKSVQTLFNKVTLGEVLEDITITEYTLIKGR
TLAQRKRVFDIHFKFLPYKLYRERLSVSPASILAFIEKTYIRKIIILIKKKMAENGRKTR
VITSGRMLKKPVTEEESVEKPKEDDAGDQEDSDIEDMAQESNAAADKEKKRHDEEKEYDD
DENEEDAKPEELDEQVTMDEESDDDDDDTSFSVEDGTGEGGNVLHTTNKMTASMRINNVL
KAQNVDEYKFDQKRQEWCQVKLQFGIQNSKVDISSLLEADVKTTIVHQIPGINKCFLTEQ
MGEERRELHLKTDGINIQEIYKYSDILDISQLYTNDIHAMANTYGIEAASRVIVKEIQNV
FGAYGIQVDYRHLCLLADYMTFEGSYKPFNRKAMETSSSPLQKMSFETTMNFLMKASIHG
NRDNLRNPSSQLVAGRLVSCGTGSCDILQPLC
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggacacagatattgctgttcagaggctggagggcctggaattccgcttctacttggag
tcagagattcagaagcttagtgtgaaggaaattaccaatactcagacatttgatgcactt
gctcatccctgctctggtggactgtacgattctgctcttggaccaacagacaaagatgat
ttatgtgggacgtgtggacagaattttgtccattgcccaggtcacatgggtcatatactt
ctgcctcttcctgtctacaaccctgtctacttctcaactctctgccagattctccgtggt
tcttgctttaactgccatcgtatggctgtctcctctctgccctcaatattgtttgtgaag
aagatggacttaatcaacaaggggttgttggccgctgcgggagagctggaggagtttgta
gccaaccagagcgaggagctcggaactaatgctgctgcagaggaagtcattaaccgaaat
atacaagataagatggctgcctggctgtcagacactggaaaacttgacgaagtttctaca
gtgaaaaatgttgaagcatttaaaaatgcagaaatcagtcatttcattcgttacaagctg
atggtgacttcagtaacttgtcctcattgtcaaaacaagaaaaggcttataaaacatgaa
aacaatgttaaatttctactatctgggaaaaggaaagtcgtggaaaagacctcagtaaag
aagggaaatgaaaaacaaggcaagtcaaagagtaaaagcaatgatgatgatagtcagatg
gacataagtaccaccatgctggaggaggtggaggaggaaactgtcaagtttgacagttca
gagcagacgtacatatcaccaagccaggcacgggatcatctgagacttttatggaaacaa
gacaaagtcatcctcaagtaccttttccactctttgtccaagacagcagatgactcgcct
gatattttcttcttacaagttatacctgtacccccgtcaagatttagaccggtttccatg
atgaatggcagaaagtttgagaatccacagacagccaacctttgtagtctgctgaaggac
gcctcaaatatgagacagttactggaggtgattgataggaagagcaaaaaagaggacgaa
gttgtggaggatgaagtaacaaaaggagtattatctcagattagtggtagctctctgatg
gagaagctacaaaactgctggatacagatgcagaaccataccaactccatcttagattgt
gaccttgacaagctgaccaaggacaagtgtccaggggtcaaacagttgctggagaaaaag
gaaggacttttcagaaagaacatgatggggaagcgagtgaattatgcagccagatcagtt
atctcccctgatccatgtatcaacacgaacgagattggtgtacctcaggtattcgccaag
aagttgacctacgctcagcctgttacaccgtggaatatccaggagctgcgtcagatggtc
atcaatgggcctgacgtccatccaggggcttgttttgttatgaatgaagatggctttaaa
actatgctgaatgccaaagatagaacacagagagaagctgttgctaagcaacttctaact
cctggagccaaccatctggcttatagagagtgtaaaaaggtttatcgccacttaaagaac
ggagatgtgatgttactgaaccgccagccgaccctccatcgccccagtatccaggcacac
aaggtaagagtgctaccgggagaaaaaacgttgagactccactacgcaaattgcaaggcc
tacaacgctgactttgacggagatgaaatgaatgcacattttccacagaatgaattggcc
agatcagaagcgtacacaatagccagcacagacttccagtatcttgttcctaaggatgga
acacctctagctggactgatacaggaccatatggtgtcgggggtcaacatcacactccga
ggccgcttctttaccagacaagagtactgtcaactggtattctcagcactagtggacata
aaaggcctggtgaagacattacccccctcgatcatcaaaccctgtaaattgtggtctggc
aaacaggttctttctacaattattttgaataccataccacctggtaaggcagccctgaat
ttaatcggtaaatccaagatcgcagagaagagttggttgacttctgatcccaacgtagac
ctgcccaaagaggtagcggaggagatgggagagagctgggtggttatccgtggtggggag
ctcctgtgtggagtactagataagggacactacggaccaaccccatacggactggtacac
tgctcttatgagctgtatgggggtgggatagcaggtaaattgttgacctattttggacgg
ctgttcaccaacttcctgcagatgatgcgaggattcacactaggagtagaagatatcctg
gtaacagcaccagcagataagaagagaaaaaaagctattgaggaatctacactttgtgga
gatgactctgctaaagaagctctgacactggacaaagaagccaactcagccactttgttg
agggcaatgaagaaagctcactacagttcagatgatgtggagctgcagatgttggaccac
agtacaaaaacacgtactgatgaggttcagaatgccatagttaaagcctgtatgcctaaa
ggattagaaaaactatttcccaagaataacctacaactaatggtccaatcaggagccaag
ggatcatctgtgaactgcatgcagatatcctgtctgctcggccagatagagttggaaggt
cgtcgtcccagacctatgctgagtgggaaaacattaccgtcctttatggcctacgatacg
tcacctcgcgctggagggtttgtgtctggccgattccttactggtatcaggcctcaggag
tacttcttccattgtatggctggacgagagggtctcatcgatacagctgtgaagaccagt
cgtagtggatacctacagcgatgtctcgtcaaacatctagagggagtgtatgttaattac
gacctgacagtgagggacagtgatggcagcattgtccagttttactatggtgaggatgga
ctagacatatcaaagaccgggtttataaccccgaagatgtacccatttctcctggataac
cggtcagcactgacagtacagaacacagaccagaaggatgttaacgacaaaagtgtgcgc
aagtggaccaaaaaaattatgaaatggaggaaaaatgccaaaaagaagaattatataaat
gagagaacatctggatttctcaacttctgcaacgaatctcaactgcctgcatcacacgac
aatactttggacaaaaatggtcgcactatcggagcatgtttgatgtgtaatgaatggcga
gctcttgatgacaaggcaaaacaaaaatattccaagtactgtgaacgatgtcctgacccg
gccatggctctctatttcccctaccaacatggcggtgtcttctctgagaagtttgaggct
gtagtgaagaactatgcaaaaaaagaactgaaaaaggctgttaaggatgagtctgtggga
ccggacgagtttaacactatgatgaaaaggaagatgatgaagtgtttagcagaacctggt
gaagctgtaggggccctctgtgctcagtctattggtgagccctccacccagatgacattg
aacacttttcattttgctgggcgaggagagatgaacgtcacattaggaattccacgtctg
cgggagatccttatggtagccagtgccaatataaagacacccgccatggacatcccagtg
taccctactcctgatgctcggcagaaagccaagagtgttcagacactcttcaacaaggtc
accctcggggaggttcttgaagacatcactatcacagaatacacactcatcaaaggcaga
accctggcccagagaaagcgagtctttgacatacatttcaagttcctaccctataagttg
tatcgagaacgtctgagcgtgtcgccagcctctatacttgccttcatagagaagacctat
atcaggaagatcattattctcatcaaaaagaaaatggcagaaaatggaagaaaaaccaga
gtcattacatcggggaggatgctgaagaaacctgtgacggaggaggaaagtgtggaaaaa
ccaaaggaagatgatgccggtgatcaggaagactcggacattgaggatatggctcaggaa
agtaacgcagcagccgacaaagaaaagaaacgacatgatgaagagaaagaatatgatgat
gatgaaaatgaagaggatgcaaagcctgaggaattggatgagcaagttaccatggacgag
gagagtgatgatgatgacgatgacacaagcttctctgtggaggatggtacaggggagggt
ggaaatgtcttacacacgactaacaagatgacagcgagcatgagaataaacaatgtctta
aaagctcagaatgttgatgaatataaatttgatcagaaaaggcaagaatggtgtcaagta
aagcttcagtttggaatacagaatagtaaagtagatatttcgtcccttctggaggccgac
gtcaagactaccatagtccaccagataccgggcatcaacaagtgtttcttaacggagcag
atgggggaagaaagacgagagctccacctaaagacagacggcatcaacatacaggaaatc
tacaagtattctgatatacttgatatctctcaactctacaccaatgacattcacgccatg
gctaatacatatggaattgaggctgcctccagggtcattgtcaaggaaattcagaatgtg
tttggtgcctatggaattcaggttgactatcggcacctgtgtcttctggcagactacatg
accttcgagggatcttataaacctttcaacaggaaggccatggagacgagcagctcacca
ttacagaagatgtcctttgaaactacaatgaatttccttatgaaggccagtatccatggc
aacagggacaatctgcgaaacccatcatcccagctggtagcgggaaggcttgtgtcttgt
ggtacagggtcatgtgacatcttacaacccctctgttga
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integrated database retrieval system
