Argopecten irradians (bay scallop): 138325878
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Entry
138325878 CDS
T10542
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03030
DNA replication
airr03420
Nucleotide excision repair
airr03430
Mismatch repair
airr03440
Homologous recombination
airr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138325878
03420 Nucleotide excision repair
138325878
03430 Mismatch repair
138325878
03440 Homologous recombination
138325878
03460 Fanconi anemia pathway
138325878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
airr03000
]
138325878
03032 DNA replication proteins [BR:
airr03032
]
138325878
03400 DNA repair and recombination proteins [BR:
airr03400
]
138325878
Transcription factors [BR:
airr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138325878
DNA replication proteins [BR:
airr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138325878
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138325878
MMR (mismatch excision repair)
138325878
DSBR (double strand breaks repair)
HR (homologous recombination)
138325878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CompInhib_SCIN
RADX
IBR
Motif
Other DBs
NCBI-GeneID:
138325878
NCBI-ProteinID:
XP_069127960
LinkDB
All DBs
Position
1:complement(35769585..35786278)
Genome browser
AA seq
628 aa
AA seq
DB search
MVQQLTAGALESIIGGESVDNPVLQVLSSKRISAQGSTADRYRLLLSDGETSYSHAMLAT
QLNSLMESGEMDNLAVVKVNRYLCNTIQGDKRVMILLDVSVLSKGSDVGQRLGNPQQLKA
QQPTADKDGHHSAQLPPQMPKQESGGQSYMGVVSQKQNTTKQSPPANPYKAGNPNKGPGN
YSMKGSNTPSTPGSSRVHTISSLTPYQNRWRIRARITQKGSVRTWSNSRGEGKLFSVNFT
DESGEIRATGFNEAVDKFYDMLEMNKVYYVSRGTLKTANKQYSNVQNDYEMTFNQDTVIE
PCTEEVDLPGINFQFVGLNELDSKAANSLVDVIGVVKTCGDVGTVTGRQSQKEITKRDIS
LVDQTGMSVNMTLWGNEATNFNGDGNPVMAVKGARLSDYGGRSLSVLASSQVLMNPTDLK
IAFQLRSWFDSEGQNMDFQSFRGEGGGGSGSGTNWMTFADVRSQNIGGGEKADYFTSKGT
LIFLRKENCMYRACPTESCNKKLIDQGNGMFRCEKCSREFPNFKWRMILSANIADFSDNQ
WVTCFQESAEVLLGKNAQELGDMKDSDEAAFDQVFQDAMFKSYIFKLRAKMETYNDETRL
KTICVNANTVNLKEYGHRLVEEINKIAQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtacaacagctgacagcaggggctctagagtccattatcggtggagagtctgttgat
aatcccgttttacaagttcttagttcaaagcggatatctgcccaaggctcaactgcagac
agatacaggcttttactttctgatggagaaacatcatattcacatgccatgttggcaaca
cagttgaactctctgatggagagtggagaaatggacaacttggctgttgtgaaagtgaat
cgttatctctgtaacaccatccaaggagacaaaagagtgatgatcctgcttgatgtttcc
gtcctgtccaaaggttcagatgtgggacagcgccttggaaatcctcaacagctgaaagca
cagcaacctacagcagacaaggatggccaccactctgcgcagctccctcctcagatgcca
aaacaggaatcgggtggtcaaagctatatgggtgttgtcagtcagaagcaaaacacaacc
aagcagtctccaccagcaaacccgtacaaagcaggtaaccctaataaaggaccaggtaat
tacagtatgaaggggtctaatacaccgtcaacaccaggcagcagtcgtgtgcacaccatc
tcatctctcacaccctaccaaaacagatggcgaatccgggcgagaattacccagaagggt
agtgtaaggacatggagcaattcccgcggggaaggaaagctcttcagtgttaatttcaca
gacgagtcgggagaaatacgggccacaggattcaacgaagctgtcgacaaattttatgac
atgctggaaatgaataaggtctattatgtgagtcgaggaacactgaagacggccaataaa
cagtacagtaatgtacagaacgactacgagatgacgtttaatcaggataccgttattgag
ccctgtactgaagaggtggatctacctggcattaacttccaatttgtagggctgaatgag
cttgatagtaaagctgccaactcacttgtggatgtgattggcgttgttaagacctgtggg
gacgtaggaacagtgaccggacgacagagccagaaagagatcacaaagagggacatttct
ttagtcgaccaaactggcatgtccgtcaacatgacactatggggaaatgaggctacaaat
tttaacggcgatggtaacccagtgatggcagtaaagggagctcgtctgtcagattacgga
ggacggtctctgtctgtattggccagtagtcaggtgttgatgaaccccactgacctcaag
attgccttccagctgaggagttggtttgattccgagggacagaacatggacttccagagc
tttaggggcgaaggtggtggtggatctggaagtggcactaattggatgacgtttgctgat
gtaaggtctcagaacatcggaggaggagagaaagccgactatttcacctcaaaaggaaca
ttgatcttcctccgcaaggaaaattgcatgtacagggcttgcccaacagaaagctgcaat
aagaaacttattgaccaaggcaatggtatgttcagatgtgaaaagtgttcgagggagttc
cccaacttcaaatggaggatgattttgtctgccaatattgcggacttctccgacaaccag
tgggtgacctgtttccaggagtcagccgaggtgttactggggaagaatgcccaggaactc
ggggatatgaaggactctgatgaagcagcctttgatcaagtgttccaagatgcaatgttc
aaatcctacatttttaaattacgagcaaaaatggaaacatacaatgatgagaccagatta
aagacgatatgtgtgaatgcaaacactgtcaatttgaaagaatatggacatcgtttagtg
gaggaaatcaacaaaatcgcgcagtga
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