Argopecten irradians (bay scallop): 138325910
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Entry
138325910 CDS
T10542
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04137
Mitophagy - animal
airr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138325910
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138325910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138325910
03009 Ribosome biogenesis [BR:
airr03009
]
138325910
04131 Membrane trafficking [BR:
airr04131
]
138325910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
airr04147
]
138325910
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
138325910
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
138325910
Membrane trafficking [BR:
airr04131
]
SNARE
SNARE associated proteins
Others
138325910
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138325910
Exosome [BR:
airr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138325910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
TIP49
NPHP3_N
AAA_14
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
ATPase_2
AAA_17
IstB_IS21
AAA_7
AAA_18
Vps4_C
ABC_tran
AAA_25
DUF815
AAA_24
TsaE
ResIII
NB-ARC
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
Rad17
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
138325910
NCBI-ProteinID:
XP_069128020
LinkDB
All DBs
Position
6:41334987..41352621
Genome browser
AA seq
811 aa
AA seq
DB search
MPPRLENRHCGDDASDDLATAILKPKEKPNRLLVEEAINEDNSVVSLSQTKMDELQLFRG
DTVLLKGKRRKETVCIVLSDDTVTDDKIRINRCVRNNLRVRLGDVVSIQACPDVKYGKRI
HVLPIDDTVEGLTGNIFEVYLKPYFMEAYRPIKKGDIFLIRGGMRGVEFKVIATDPDPYC
IVAPETVIHCEGEPVKREEEEEALNEVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKAIG
VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE
KNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSID
TALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDVDLEQVASETHGHVGADLAAL
CSEAALQQIREKMDLIDLEDDTIDAEVLDSLAVTMEDFRWALGKSNPSALRETAVEVPSV
TWEDVGGLENVKKELQELVQYPVEHPEKFMKFGMTPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISIKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNAGDGG
GAADRVINQLLTEMDGMSAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDAKSRI
SILKANLRKSPVSKDVDVDYLAKVTQGFSGADLTEICQRACKLAIRQSIEAEIRMERERA
NNPDADMETEDYDPVPEISRVHFEESMKFARRSVNDNDIRKYEMFAQTLQQSRGFGGNFR
FPGQTEGRNEPRQGGTPGGNFNEQDDDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaagacttgaaaacagacattgtggtgatgatgccagtgatgatttggcgacg
gctatccttaagccaaaggagaagccaaacaggctgctggttgaagaagctatcaatgaa
gacaactcagttgtgtcactttcacagacaaaaatggatgagcttcagctcttccgtgga
gacacagtccttctgaagggcaaaaggagaaaggaaactgtgtgtattgtattgtcagat
gatacagttacagacgacaagatcagaatcaacagatgtgtgagaaacaacctgagagta
cgactgggagatgttgtcagcatccaagcctgcccagatgttaaatatggaaagaggatc
catgttcttcccatcgatgacacagtggaaggactcacaggaaacatttttgaggtatac
ctgaagccgtactttatggaagcctacagacccattaagaagggagatatattcctgatc
cgtggaggtatgagaggggtagaattcaaagtgatcgccacagaccctgacccgtactgt
atcgtggctccagaaacagtcatccactgtgaaggtgaacctgttaaacgcgaggaagaa
gaagaggctcttaatgaggttggatatgatgatatcggaggctgcagaaaacagcttgcc
cagatcaaggaaatggttgagcttccccttcgtcatccacaactattcaaagctattggt
gtaaagcccccacgaggtattctgctgtatggacccccaggaacgggtaaaactctcatc
gccagggctgtagctaatgaaactggtgccttcttctttctcattaacggccctgaaatt
atgagtaagctggctggagaatcagaaagcaatctgagaaaagcatttgaagaggcagag
aaaaatgctcctgctatcatcttcattgacgagttggatgctattgcacccaagagagaa
aagacacatggtgaggtagagaggagaatcgtatcacagctgctgacacttatggacgga
ttaaaacagaggtcccacgtcattgttatggctgccaccaacagaccaaacagcattgat
acagctttaagaagatttggacgattcgacagagaagtagacattggtatcccagatgcc
actggccgattagaaatcctacgcatccacaccaagaacatgaagctgggcgatgacgta
gatctggaacaggtcgcctccgagactcatggacacgttggtgctgatttggctgctctc
tgctcagaagctgctctgcagcaaatccgagaaaagatggatctcattgacttagaagat
gacacaatcgacgcagaagtactggactctttagctgttaccatggaagactttaggtgg
gctttaggaaagagcaacccaagtgctctgagagagacggctgtagaggtaccaagtgtt
acctgggaagatgtcggaggtctggaaaacgtgaaaaaggaactccaggaattagttcag
tatcctgtagaacatccagagaagttcatgaagtttggtatgacaccatccaaaggagta
ctgttctacggcccaccaggatgtggtaaaactctgttggctaaggctattgctaacgag
tgccaggccaacttcatttcaatcaaaggtccagagctgttaactatgtggtttggagag
tcagaggctaatgttagagatatctttgataaggcacgatctgctgctccatgtgtcttg
ttctttgatgagttggactccatagcaaaagccagaggtggaaatgctggagatggaggt
ggtgctgccgacagagttattaaccagctgctcacagaaatggacggtatgagcgcaaag
aaaaatgtcttcatcattggagccacaaacaggcctgacatcattgatcctgccatcctg
agacctggtcgtcttgaccaactcatctacattcctcttcctgatgctaagtccagaatt
tctattctcaaggccaacctaaggaaatcgcctgtctctaaggacgttgatgtagattac
ctggccaaggtaactcagggcttcagtggtgctgatctgactgagatctgccagagggcc
tgtaaactggccatccgacagtctatagaggccgagatcaggatggagagagaacgcgct
aacaacccagacgcagatatggaaactgaggactacgaccccgtaccagagatatccaga
gttcattttgaggagtcgatgaaattcgcgagacgatcagtcaatgataacgacattagg
aagtatgagatgtttgcacagaccctacaacagagcagaggattcggaggaaacttcaga
ttccctggacagactgaaggccgtaatgagccaagacaaggtggtaccccaggaggaaac
ttcaatgaacaagatgatgatgacctctacagttaa
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