Argopecten irradians (bay scallop): 138325951
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Entry
138325951 CDS
T10542
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138325951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138325951
Spliceosome [BR:
airr03041
]
Complex C
Other components
Step II factors
138325951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_NWD2_C
PQQ_2
Motif
Other DBs
NCBI-GeneID:
138325951
NCBI-ProteinID:
XP_069128076
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Position
1:complement(35913688..35925634)
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AA seq
571 aa
AA seq
DB search
MLALQDYASDSSGSDEETKQSVEDLTAHLKPIQSGKSLVSTQMLDAAPLVITKEDVGVQR
ALDITTKEVKYNPKFEEMFAPQVGPSNPFKTQQMLATKNMISGYAESAHFNQFEFENQRR
TFTSYGYAMDPSVDVQVSSDLPIVGDKVAAEESKGLTVFEAAPKRPEDKRKRLRNSDPGD
IEGYLGPWGKFVDEKTVMKPSEDEQKELDEILAKRSKTNKQTEERTAEEKTTLHIKDAYD
YQGRSYLHIPQDVGVNLKSEEPPEKCFLPKKHIHTWTGHTKGLSAIRWFPVSAHLLLSCS
MDCKIKIWEVYNERRCIRTYAGHKQAVRDITFNNDGKEFLSCGYDRYCKLWDTETGECKS
RFTSRKVPYCVKFHPEPDKQHLFVAGTSDKKIVCWDIRSGEIVQEYDRHLGAVNTITFVD
QNRRFVSSSDDKSLRVWEWDIPVDFKYIADPSMHSMPAVTLSPNGKWLACQSMDNKVSIF
NVLNRFKYMRKKTFTGHMVAGYACNVDFSPDMSYIISGDADGKLYVWDWKTTKLYSKFKA
HDDVCISVLWHPHETSKVATAGWDGIIKYWD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctctgcaagactacgcgagtgattcttctggttctgatgaagaaacgaagcag
tcggtggaagatttgactgctcatttgaaaccaatacaaagtggaaaatcgctcgtgtca
actcaaatgctagacgcggctcctttagtaatcacaaaggaagatgttggtgtgcagcgt
gctttggatatcacaaccaaagaggtgaaatataaccccaagtttgaggaaatgtttgca
cctcaggtaggaccatctaacccatttaagacacagcagatgcttgctacaaaaaacatg
atttctggttatgctgagtctgcacatttcaaccagtttgagtttgaaaatcaacgtaga
acattcacaagttatggctatgccatggacccctctgtggatgttcaggtatcatcagat
ctaccaatagttggggacaaagtggctgctgaggaaagtaaaggtcttaccgtatttgag
gctgcacctaaacgtcctgaggacaagaggaagcgtctgcggaattctgatcctggagac
atagagggatatctcggtccctggggaaagtttgtagatgagaaaactgtgatgaaacca
agtgaagatgaacagaaggagctggatgagattttggccaagaggagtaaaacaaacaaa
cagacagaagaaaggaccgctgaggagaaaactacactacacattaaggatgcctacgac
taccagggccggtcctaccttcacatcccacaggatgtgggcgtgaatctgaagtccgag
gaacctccagagaaatgtttccttcccaaaaaacacatccatacatggacaggacacacc
aaggggttgtccgccattcgctggtttcctgtatctgctcacttgcttctctcctgtagt
atggactgtaaaattaagatctgggaggtgtacaatgaacggagatgcatacggacatat
gcaggacataaacaagcagtccgagacatcacattcaacaatgatggcaaggaattcctc
agttgtggctatgataggtactgtaagctgtgggacactgaaacaggtgaatgcaaatca
cgatttaccagcagaaaggtaccttactgtgtgaagttccacccggaaccagataaacaa
cacttgtttgtggcaggaacttccgataaaaaaattgtttgttgggatattcggtcaggc
gaaatcgtccaggaatatgaccgccatcttggcgctgtgaacaccatcacattcgtggac
cagaatcggcgatttgtcagctcctctgatgacaagagtttaagagtctgggaatgggat
attcctgtggattttaaatatattgctgatccgtctatgcactcgatgccagcagtcact
ttgtctcccaatgggaaatggctagcctgtcagtccatggataacaaagtctccatattt
aatgtgctcaacagatttaagtacatgagaaagaaaacatttactggacacatggtggct
ggatatgcctgtaatgtagatttctctccagatatgagttacatcatctctggagatgca
gatgggaagttatatgtctgggactggaaaactaccaaactttacagcaaattcaaggcc
cacgacgacgtgtgtatcagtgtcctgtggcatccgcacgaaacatctaaggtggctaca
gcaggctgggatggtataatcaagtactgggactga
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