Argopecten irradians (bay scallop): 138325984
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Entry
138325984 CDS
T10542
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
airr03016
]
138325984
Enzymes [BR:
airr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
138325984
Transfer RNA biogenesis [BR:
airr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138325984
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
138325984
NCBI-ProteinID:
XP_069128132
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Position
6:43271273..43289033
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AA seq
511 aa
AA seq
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MSKIEKADVPEGSCAFFIERKARYCRFRPNQGQRYCAEHAGLLGIDTGRKRVKCPLNSKH
TCYEDQLNKHLKKCRKQQSEIPVFHVDGINSGADSSDLDEETRKIPWADVPLSELLSLID
RVNQKYQGIFPEYVEAIPTEILDHESLQEELANDNFRIPALRHRKQQASLIGHLGKMDLL
KDKMCYVELGAGKGMLSHWIQKASDKCNDTAFLLVDRGHVRYKAENQHKWGESGPRFERI
RIDIANLHLGKVPSIHDNKRPVVAVGKHLCGGATDLAVRCVTNTLTTDDSIETARGNEPA
CKRSKPNTSSLFAGLTIALCCHHRCTWETYVGKSFMKTCGFSSRDFTLMCKLSSWTAATW
KGWTTIEQMNKEIKSSSNIDSISPVLQTSDGGSSEGSTRGEVSSPQSEASCTDRAETVLE
DNRDLVSQSDEAEDEHQSEPALTRNDLSLPTEAREKIGRQCKRLIDFGRVQYMREHDMDS
KLVVYIDERLTPENVAIIALPHNQLNTCGQS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatagaaaaagcagacgttcctgagggaagttgtgcattctttatcgagaga
aaagcaagatattgtagattcaggccaaaccaaggtcagagatattgtgcagaacacgct
ggattgctcggtattgatactggtagaaagagagttaagtgtccactaaattcaaaacat
acttgttatgaggatcagctgaacaagcatctcaagaaatgcagaaaacaacaaagtgaa
atacctgtcttccatgttgatggcattaattcaggggcagattcttcagatcttgatgaa
gaaacaagaaagattccctgggcagatgttcctttgtctgagctacttagtctgattgat
agagtgaaccagaaatatcaagggatttttccagaatatgttgaagccattccaacagag
atcctagatcatgaaagtttgcaggaagagttggccaatgacaatttcagaataccagct
cttaggcacagaaagcaacaggcatcacttattggacatctagggaaaatggatcttctt
aaggataagatgtgttatgtagaacttggtgctggaaagggtatgttatcccattggatc
cagaaagcttcagataaatgtaacgacacagcctttttgttggtggacaggggtcatgtt
cggtacaaggcagaaaaccaacacaaatggggtgagagtggtcctagatttgagcggatt
aggattgatattgccaaccttcacctagggaaggtgcccagtatacatgacaacaagcgc
ccggtagttgctgtaggaaaacacctatgtgggggcgccaccgatctagcggtgcgatgt
gtgacaaataccttgactactgacgactccatagagacggctagaggaaatgaaccagca
tgtaaacgctccaaacccaacaccagctccctgtttgctggtctgaccatagctctgtgc
tgccaccatcgctgtacctgggagacgtatgtaggcaaatcgtttatgaagacatgtggg
ttttcctctcgagactttactttgatgtgtaagctgagcagttggacagcagctacatgg
aaaggctggactactattgaacaaatgaacaaagaaataaaatcatcatcaaatatagat
agcatttctccagtgttacaaacttctgatggaggcagcagtgaaggttcaacccgtggt
gaagtttcctctcctcaaagtgaggctagttgtacagaccgtgcagagacagtgttggaa
gataatagagatctagtcagccagagtgatgaggcggaggatgaacatcaatcagaacct
gctctcaccagaaatgacctgtctctgccaacagaagccagagaaaagatcgggagacag
tgtaaacgacttatcgacttcggccgggtccagtatatgcgggaacatgatatggattca
aaattggtggtctacatcgatgaaagacttactcctgaaaatgtggccatcatagcactg
cctcacaatcagctaaatacctgtgggcagtcatag
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