Argopecten irradians (bay scallop): 138325985
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Entry
138325985 CDS
T10542
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like
KO
K10839
UV excision repair protein RAD23
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03420
Nucleotide excision repair
airr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138325985
09124 Replication and repair
03420 Nucleotide excision repair
138325985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
airr03051
]
138325985
03400 DNA repair and recombination proteins [BR:
airr03400
]
138325985
Proteasome [BR:
airr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
138325985
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
138325985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
CFAP298
Motif
Other DBs
NCBI-GeneID:
138325985
NCBI-ProteinID:
XP_069128135
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All DBs
Position
6:complement(43262798..43271090)
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AA seq
393 aa
AA seq
DB search
MLITVKTLQQQSFKVEVDPEELVKVLKEKIEAEKGKEGFPASGQKLIYAGKILEDDKKVA
DYKIDAEKSFLVVMVTKPKAAAAPAPKPAETAPPPAQVVEATPPAPPAEQPKQEPEKMDD
KPTSPPPATATPTTTASATEGTASTTDSSTATASVSAESTLVTGQAYENMVAEIIGMGFE
RERVVQALRTSFNNPDRAVEYLLTGIPDFPAEPPAPVPPSSAQSAPATAPAPGTTSSGNV
TANPTPQGEEDTLAFLRTQPQFNHMRRLIHQNPSLLPQLLQQIGQSNPQLLQLISRNQER
FIEMLNEPVGEEEQQAEGGGVIPGVQAGAPGANPMGQGYVQVTPQEKEAIERLKALGFGE
GMCIQAYFACEKNEELAANFLLSQNFDDDDQQS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgattacggtaaaaactctccaacagcaaagcttcaaagttgaagtggacccagaa
gagttggttaaggtcctaaaagaaaaaatagaagcagagaaaggcaaagagggatttcct
gcaagtggacagaaacttatttatgcaggaaaaattttggaagatgacaaaaaagttgca
gattataaaatagatgcagagaaaagttttttggtcgttatggttacaaagccaaaagca
gcagcagcacctgcccccaaaccagcggagacagcgcctcccccagcacaagtagtagaa
gccacacccccagcaccacccgcagaacaaccaaagcaagagccagagaaaatggacgac
aaaccaaccagtcctcctcctgctacggctacccccaccacgacagcatcagctacagaa
ggcacagccagtaccacagacagtagcacagccacagcctctgtgtcagccgaaagtaca
ctagtgacaggacaagcttatgaaaacatggtggcggagataattggtatgggcttcgag
agggaacgggtagtgcaagcgttgagaaccagttttaataatcctgacagagctgtggaa
tatctgcttacaggtattcctgatttccccgcggagcctccagcaccagttcctccatct
tcagcacagtcagccccagctacagctccggcaccaggcacgacgtcgtcgggcaacgtc
acggcaaacccaacaccacaaggagaagaagataccttggcattccttagaacccaacct
cagtttaatcacatgcgaaggctaattcatcaaaatccttctcttcttcctcaactatta
caacaaatagggcaatcaaatccacagttattacagcttattagcaggaatcaagaacga
tttattgagatgttaaatgaacctgtcggtgaggaggaacagcaagcagaagggggtggt
gtaattccaggcgttcaagcaggggcacccggggccaatcccatggggcagggatatgta
caggtcacaccacaggaaaaggaagcaatagaaagattaaaagcattgggtttcggtgaa
ggaatgtgtattcaagcctatttcgcttgtgagaaaaatgaagaattagctgccaatttc
ctattgtcccaaaattttgatgatgatgatcaacagagctga
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