Argopecten irradians (bay scallop): 138326015
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Entry
138326015 CDS
T10542
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr02010
ABC transporters
airr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138326015
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138326015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138326015
Transporters [BR:
airr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138326015
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
138326015
NCBI-ProteinID:
XP_069128210
LinkDB
All DBs
Position
6:44641881..44688998
Genome browser
AA seq
2419 aa
AA seq
DB search
MGFGNQLSLLLWKNFTLRWRQKYRWLVEVLAPLILVFVLVGVRTRPDLKWNHPECHFDGK
SMPSVGIVPFLQSFFCTFNNTCYETVTPTADYKDSLMTKLVEDVTDVLNNNMDRKLILDL
IGTWDIISSLSAKIMNGSTQGHVKVLSLFKNPRELVQEIVSNNITLTETSLVNLLNASID
FSQFSRPHLSDVLRDFEVCPRIGRSVGPKKNAAEVRDFICSSDSMLESFRFKDTAARRTV
QAELCRIPEAHLVKLYELFKNRYSIQHFIFQVLRFVFMNTGKIPNVTKIYGKLKVLFKDV
KELDSTDAAAFEKPIQDLIDFFSKRGKPSTQVIMEQMGKFVCGRNSFMQMQTGKSMDILE
RFNSFNRPDIKDGKNKGKNDYGPNSPVCMELVELMNSNVNTQILWKNLRPVVLGKIPYAP
DTPAVREIIRGANQTFADLARMVKLAEDWEEYAIYLERYLKTSPTMDMLRAFSTSCLCDI
LESKTKNLIKSKTNTTMNKSVCYFLKTYFSKDPKAEGNFDWEQSIHYTKIFARVVAEYGK
CFQFNKFVGYASEAELIENSLDMIEEDSFWGALVFDVEPGASQLPTHLSYKIRMDTTKVD
DTKRVTDKYWRPGPRRRAGTETKYLTYGFAYLQDMVDHAIIKLQTGRQDDTGVILQQFPY
PCYTEDSFMEVISKTLPLFLILAWIFPVALLCKNIVYEKEKRLKEMMKIMGLGNGVHWVA
WFINAFVSMLITISLLVIICKYGKIIQESDPVILLLFFVSFCVATISMVFMISVFFSQAN
LAACSAGFIYFLMYQPYSFAKRWEDVLSGVQKMGFCFSSNVAFGFGCTYIARFEEQNVGV
QWSNIAESPLVDDDFSMLYCILMLWLDAILYGLITWYIEAVFPGQYGIPRPFYFFFLKSY
WCGNGNGKVKGEDKEDEEENPYEVEQVTGTHMEEEPTSRNLGVSIKKLRKAYGKKVAVDG
LNINFYEGQITSFLGHNGAGKTTTMSILTGLFPPTKGTAYVYGLDITTQMEEIRSSLGLC
PQYNALFPYLTLKEHLWFYARLKGLTNVQAKAETKQLIQDIKLPHKKNAVPKMLSGGMKR
KLSVAIAFVGNAKTVILDEPTAGVDPYSRRSIWELLLKFKKDRTIILSTHHMDEADVLGD
RIAIISQGKLCCCGSSLFLKSRYGNGYYMTMVREGAEEIDEENDEYEMLYENVLPILKPK
RREARVDVDEGFAERSTDNDLAFLMPTPPPDGALKPAFSEKRLTAFIKKFVIEAKLVESN
KSELTYQLPDYGTQTGEFVFMFEELERCHKDIGISSFGISDTSLEEVFLKVAEAVNEKDK
EVAKSPTDEVKRKRLEEVSDGGRVPRPVTQISFRRNKRQSFLRVTPRQQLQEIQEQQVQQ
EIESSSEGREEVVYLEPMTVIKREVGFNHKEQVKLEGKRLLWHQFMAVFIRRFHHFKRSK
KGFVCELVMPAFFVLLAMVFAEIDPPLTDSPPLELHPWKLLPPKGNSHLNMFYSNDAKGT
KFTEESVRTLLSRYGVGNRCMDPDVYSIDGFPCEESDTKSIWTEAENWNKADNVNCSCSS
GVQQCPAGAGGPVPRKRMLPTSDYLYDLTDRNITDWLVKTVRSYRKRRYGGLSFGMKSKW
AQFNTDHIKQIFNTLREVSRQSNISFQNVLGGINSIMGRVAVHNISKVWYNNKGWPAVVI
YMNVMNNVILRSKLKPGQDPSKYGISTINHPMNLTMKQSRDGASATSKTDIIISTCVIFA
MSFIPASFVMILIEERILDSKHLQFVSGIHPSIYWIGNFTWDMLNYLVSSALSICIFVAF
QREAYVGKTNFPALLLLLVMYGWAMIPLMYPFSRLFRVPSTAMVTLKSVNIFLGTTSTLA
TFILEFLADDDPALGEVNDILKQVLLILPQFCLGQGLLELSRSQVYTTAFKKFDLDGIVN
PLQWGQVGKNLFSMFLCGLVFFLLNLLIEHNFFIHQKVGPTPEGDVEDEDEDVARERARV
LSEDGENDIVRIDNLTKVYKVPGGKGRHVAVDRLCLGVPKGQCFGLLGVNGAGKTTTFKM
LTGYLGMTHGNAFINGFSIVTAVKEVRRSIGYCPQFDAFDPLMTAREVLCFFAKIKGIPS
SDIKDVVDWAITKLGLTQYADKPSGTYSGGNRRKLSTAIALIGNPSVIFLDEPTAGMDPV
ARRFLWNCINNIVKDGRSVILTSHSMEECEALCSRLAIMVNGRFRGIGSIQHLKTRFGDG
YIVVIRIAGDHPDLDIVDDFILETFPSASLRERHHNMLQYQLGSDVPLSHIFSEIEAVRE
GLNIEDYSVSQTTLDQVFINFAKMQTDSLDSGSTTPEPEAPTDEVPNDSASLATSMTTLN
TDRRTSTSTLGGASGSDRVGDGYSTIGAVPPRERTNSEGYTTIREISQVKYAAPKPRLKR
KPRILESHNSVNGQAGFNI
NT seq
7260 nt
NT seq
+upstream
nt +downstream
nt
atgggatttggaaatcagttatctttactgctgtggaagaacttcaccctgagatggcga
caaaagtaccgttggttggtggaagtgctcgccccgctgatccttgtctttgtactggtt
ggagtacgaactcgtcctgacctcaagtggaaccatccagaatgccattttgacgggaag
tcgatgccgagtgtaggtattgtgccgttccttcagtcgtttttctgtaccttcaataac
acttgctacgagacagtcacacctacagccgactacaaagattcactaatgacgaagctt
gttgaagatgtcacggacgtcttaaacaataacatggaccggaagctgattctggacctg
atcggaacctgggacattatatcttctctgtccgcaaaaatcatgaacggctcaacccag
ggccatgttaaggtactcagtcttttcaaaaatccacgagaacttgttcaggaaatcgtc
agcaacaacatcacattgacagaaacctcgttagtcaacctgctgaacgcatccatagat
tttagtcagttcagccgcccccacctgagtgacgtattgcgagactttgaggtttgtccc
aggattgggaggtcagttggtcccaagaaaaatgccgctgaagtccgcgacttcatctgt
tcctccgattcaatgttggagtcgttcaggttcaaggacacagctgctcgacgaaccgtc
caagctgaactttgtcgcattccagaagctcatcttgtcaagttgtatgaactcttcaag
aatagatacagcatccagcatttcatctttcaggttttacggtttgtctttatgaatact
ggaaaaataccaaacgtcacaaagatctacgggaaattaaaagttctctttaaagatgta
aaggagcttgactcaacggatgcagctgcctttgagaagccgattcaagacctgatagac
ttcttttccaagagaggaaagcccagtacccaagtaatcatggaacagatggggaaattt
gtttgtggtagaaattcattcatgcaaatgcagactggcaagtctatggatatcttagag
cgatttaattccttcaaccggccggacattaaagacggcaaaaacaaagggaagaatgat
tacggacctaactcgccggtgtgtatggagttagtcgaactgatgaattccaatgtgaac
acacagattttatggaaaaatctgcgaccagtggtcttaggaaagattccatacgcccca
gatacgccagctgtccgggaaatcatcagaggggcgaaccagacgtttgcagacctggcc
agaatggtgaagttagcggaggactgggaggagtatgctatatacctggagcgatacctt
aaaaccagtcccaccatggacatgctcagggcgttctccacatcgtgtttgtgtgacatc
ctggagagtaaaacaaagaacctgatcaagtccaagacaaacacgacgatgaataaaagt
gtgtgctatttcctcaaaacatacttcagtaaggaccccaaggctgagggcaactttgac
tgggaacagtccatacactacaccaagatatttgccagagttgtggccgagtatggcaag
tgtttccagtttaacaagtttgtgggctacgcctcagaagcggagcttatagagaacagt
ctggacatgatagaagaggacagcttctggggagcactggtgtttgatgtagaacctggg
gcgagtcagctcccaactcatctctcctacaagatcaggatggataccaccaaagtagac
gacactaagcgggtcactgacaaatattggcgccctggccccagaagacgagcgggaaca
gagacaaagtatttgacgtacggttttgcctacctacaggacatggtggaccacgctatc
atcaagttacagaccggccgtcaggacgacactggcgtgattctccaacagttcccatac
ccttgttacacagaggactcatttatggaagtgatttccaagacgctacctctcttcctg
atcttggcgtggatctttcctgtggctttactgtgtaagaacatcgtgtatgagaaagag
aagcgtctgaaggaaatgatgaagatcatgggccttggtaacggtgtacattgggtggcc
tggttcatcaatgcgtttgtctctatgttgataacgatcagtttgttggtcatcatttgt
aagtatggtaagattatccaggagtcggaccccgtgatacttctccttttctttgtctcc
ttctgtgtggccaccatcagcatggtctttatgatcagcgtgttcttctctcaggctaat
ctcgccgcctgctctgctgggtttatctacttcctcatgtaccagccgtacagcttcgcc
aaacgctgggaggatgtgctcagtggggtgcagaagatgggattttgtttctcatccaat
gtggcgtttggttttggatgtacctacatcgcgcggtttgaggaacagaatgtgggagta
cagtggagtaacatcgccgagagtccactggtcgacgacgatttcagtatgctgtactgt
atactcatgctgtggctggacgccattctgtacggacttatcacatggtacattgaggct
gtcttcccaggacagtatggaattccgcgaccattttatttcttcttcctgaaatcctac
tggtgtggcaatggaaacggaaaggtcaaaggtgaagataaggaagacgaggaagagaac
ccgtatgaggtggaacaagtcacgggaacccacatggaagaggagccaacaagtcgtaac
ctaggggtgtccattaaaaagttacggaaggcatacggtaaaaaggtggcggtggacggc
ctcaacatcaacttctacgaaggtcagatcacgtcatttctgggtcacaatggagctggt
aaaaccaccactatgtctattctgactggcctgttcccgccgactaaaggtacagcgtat
gtctacggattagacatcacaacacagatggaggagattcgctccagtctgggactctgt
ccccagtacaacgctctcttcccttatttaaccctcaaagaacatctgtggttttatgca
cggttgaagggactgaccaatgtccaagccaaggctgaaactaaacaactgatacaggac
atcaaactgcctcacaagaaaaatgctgtccctaaaatgctctcaggtggtatgaagagg
aagctgtctgtagccattgcatttgttggcaatgccaagactgtgatcctggatgagcca
acagctggtgtcgatccatactccagacgttctatctgggaattacttctcaagttcaaa
aaagatcgtacaatcatcctgtcgacccaccacatggatgaagctgacgtcctcggagac
agaatcgctatcatctcacaaggcaagctctgctgctgtggctccagcctcttcctcaag
tctcgctatggtaatggctactacatgacaatggttcgagagggtgctgaagaaattgat
gaggagaatgatgagtatgagatgctgtatgaaaacgtcctgccaatactgaaaccaaaa
cgaagagaggcgcgtgttgatgtggatgaaggatttgcagaacgatccactgataatgac
ctggcgttcctgatgcccaccccaccgcccgacggagccctcaaacctgctttttccgag
aagcgtctgacagcctttataaagaagtttgtaattgaggctaaactggtggagagtaat
aaatcggagctgacgtaccagttaccagattacggtacccagaccggcgagttcgtgttt
atgtttgaggaactggaacgctgtcataaggatattggaatttccagttttgggatctca
gatacaagtctagaagaggtgttcctaaaggtggcagaagcagtaaatgagaaggacaag
gaggttgctaagagtccgactgacgaggtcaaaaggaagagactggaggaggtttctgat
ggtgggcgagtacctagacctgtcactcagataagtttccgtagaaacaagcgccagtcg
ttcctaagggtgacaccaagacagcaattacaggaaattcaggaacagcaagtccaacaa
gagatcgagagctcttcagaaggaagggaggaggtggtctaccttgaacccatgactgtg
atcaagagagaggttgggtttaaccacaaggagcaggtgaagttagaagggaagcgcctt
ctctggcaccagtttatggctgtcttcatcaggaggttccatcacttcaaacgcagcaag
aaaggatttgtctgtgagcttgtgatgcctgctttcttcgtcctgcttgccatggtgttt
gctgagattgatcccccacttacagactcgccgcccctggaacttcacccatggaaactg
ctgcctccaaagggaaattcacacctgaatatgttttacagtaatgatgctaaaggaacc
aagtttactgaggagtcggtgagaacgttgttgtcgaggtacggtgtggggaaccggtgt
atggatccagacgtctactctatagatggttttccatgtgaggaatcagacaccaagtcg
atatggacggaggcagaaaactggaacaaggcggacaacgtcaactgttcctgttcttca
ggtgtccagcagtgtccagcaggtgcgggaggtccagtgccaaggaaacgcatgctacct
acctctgactacctgtacgatctgacagacaggaacatcactgactggttggtgaaaact
gtgaggagttacagaaaacgcaggtacgggggtctgtcgtttggaatgaaatctaagtgg
gcccagttcaacactgaccatataaaacagatatttaacacactacgagaggtcagcaga
cagtcgaacattagtttccagaacgtccttggtggtatcaactccatcatgggccgcgtg
gccgttcacaacatctccaaggtgtggtacaacaacaaaggatggccagcagtggtgatc
tacatgaacgtgatgaacaacgtcatactccggagcaagcttaagccgggccaggatccc
agcaaatatggtatctcgaccattaaccatccaatgaacctgacgatgaaacagtcacga
gatggagcctcagccaccagtaaaacagatatcatcatttctacgtgtgtgatcttcgcg
atgtccttcataccagcaagctttgtcatgattctaatcgaagagcgaatattggactcg
aaacatttacagtttgtgagtggtatccacccgtccatctactggataggaaacttcaca
tgggacatgctgaattaccttgtgtcatcagccctcagtatatgtatctttgtggcattt
caaagagaagcctatgttggtaaaactaacttcccagcactgttactgctacttgtgatg
tatggttgggcaatgattcctttgatgtatccattttctcgcttgtttcgagtgcccagt
accgccatggtaacgctgaagtcagtgaatatcttccttggcacaacctcaacactggcc
acatttattttggagtttttagctgacgatgatccggctctgggagaagtgaatgacatt
ctaaaacaagtgttgctgatcctgccccagttctgtctcggccagggactgttggaactt
tccaggtcacaagtctacactacagcattcaaaaagtttgaccttgatggcattgtaaac
ccactacaatggggacaggtgggaaagaacctcttctccatgtttctgtgtggccttgtg
ttcttcctgctaaacctgctcatagaacataacttcttcattcatcagaaggttggcccg
acccccgagggagacgtggaggacgaggatgaggatgtagctagggagcgggctcgtgtc
ctgtcagaggatggcgagaatgatattgtacgcatagacaacctcaccaaggtgtacaag
gtcccaggagggaaggggcgccatgttgccgtggacagactgtgtttgggagtccctaag
ggtcagtgtttcggactgctgggtgtcaatggagcaggaaagaccacgacctttaaaatg
ttgacaggatatctgggaatgacacatggcaatgcttttatcaatggattcagtattgta
acggcggtgaaggaggttcgacgcagcatcgggtactgtccccagtttgatgccttcgac
ccactaatgacagccagggaagttctgtgtttcttcgccaagataaaagggatcccctca
tcagatatcaaagatgtcgttgattgggccattacgaagctgggacttacacagtacgct
gacaaaccctcgggcacatattctggaggaaaccgacgtaaactctccacagccattgct
ctcataggcaacccctctgtgatatttctggacgagcccacagctggaatggatccagta
gctcgaaggtttttgtggaactgtatcaacaatattgttaaagacggccgttctgtcatc
cttacttcccacagcatggaggagtgtgaagccctttgtagcagactggccattatggtg
aatggacgattcaggggaattggtagtatacagcatctcaaaaccagatttggagatggc
tatattgtagtgataaggatagcaggcgaccatccagacttggatatcgtggacgacttt
atcctggagacgtttccatctgccagtctgcgggagagacatcataacatgttacaatat
cagctgggatcagatgtaccgctgtctcacatcttctctgagatagaggccgtcagggaa
ggattgaatatcgaggattactcagtctcccagactacactagaccaagtttttataaat
tttgccaagatgcagacagattcattagacagtggctccactacaccagaaccagaggcc
cctacagatgaagtaccaaatgacagtgcaagtcttgctacaagtatgacaacactgaac
acggacagaaggaccagtacgtctacactagggggcgccagtggttcagacagagtaggt
gacggctactccacgataggggctgtaccgccaagggagaggactaacagtgaaggttat
accacgataagggagataagccaggtcaaatacgcagcaccgaaacctcggctcaaacgt
aaacctagaatcctcgagtctcataattctgtgaatggacaggctgggttcaatatatag
DBGET
integrated database retrieval system
