Argopecten irradians (bay scallop): 138326549
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Entry
138326549 CDS
T10542
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr02010
ABC transporters
airr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138326549
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138326549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138326549
Transporters [BR:
airr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138326549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
138326549
NCBI-ProteinID:
XP_069128746
LinkDB
All DBs
Position
6:44529715..44616914
Genome browser
AA seq
2482 aa
AA seq
DB search
MGFGSQLLLLMWKNFTLRRRQKVRLLLEIIFPLTLFFILVIVRQRPDLKTRHGECHFEGK
AMPSAGNLPWLQGLVCTYNNTCHDTVSSGETAGQLQTFNSTLINDLIRDLTDILGDQSAV
RAFDDLVHDYYLLRELLGQVQNGTTTGTLNLGNFVGSRQNLTDQLQQRNISIAPDAIDMI
LNSTVNLNDYDLATVNEILTDFSTCEESPLVASADDFRTLICNTGNLSQLLNFQSPADSA
YVISEVCGLSDADFTTAFDVLRDQFDPNSAVNEIDTFITNTTGRSPRTNPAELFAIFEQI
SQTVTDFTTLSNSAGDLDPIMNLFRDISSGNVSTSSVGSMVCGREGTFFNFGDEESNDSP
VTRGQGSPGGQSNQGNPGTTTPAPTTTRGSVRPGISLSGGGVRPGISLSGGGRQNRSLNG
RSVTVSSLCISLYIPPSTTTRGSVRPGISLSGGGRQNRSLNGRSVTVSSLCISLYIPPST
TTRGSVRPGISLSGGGVRPGISLSGGGVCPRISLSGGGVRPGISLSGGGRQNRSLNADVC
NNILSSFGGGSDYIFRQLRPLLQGNILYYPDTPDVQIIIKETNKTFEDLARLSDLVILLN
SDTLMLESSLDILINFTGSCLCELVENATAGIDLAQFISSQLFPLPSFVPSFLVNIGIQE
AEDYINNNQYYQMIKSPNESFCQFLNNYLVNGSIGTNVDLRDTLAMVEQVTGMISQYTQN
SSHLLFQTWTSVLFLGLQFDVVKMDSSKRPTFVNYRIRMDPDKVDSTKRVQDRYWRPGPR
RTPAVDTKYTTFGFSYIQDMVDHAIIRLQTANKQDTGIELQMFPYPCYTEDKFVYAISRS
LPLFLVLAWVLTVAMICKNVVYEKEKRLKEVMKIMGLGNLVHWVAWFINAFVVMFITIIL
LVILVKGGKVLEFSDPSVLIFFFTVFAISTIIQCFLISVFFSRANLAACCAGFIYFLLYL
PYNLSIQWEEQMTGGHKFLGSLSSGVAFGFGCSYIALYEEQAVGIQWSNLAETPTVDDEF
NMLYCIIMMAVDSVIYAIAVWYIEAVFPGDFGIPRKWYFPFQKSYWCGHTNFSDDGMAYA
MGESTMELNGSPVRTMEKEPQHRRLGVGIRKLKKVYSQGKKVAVDGLTMNFYEGQITSFL
GHNGAGKTTTMSILTGLFPPTEGTAFIYGKDIRTDIDEIRKSIGMCPQHNVLFDHLTVEE
HLWFFARMRGLSPKKVEKEMEQMIKDVGLPHKRKELSNSLSGGMKRKLSVAIAFCGNSKT
VILDEPTAGVDPYARRSIWELLFKVKKNRTIILSTHHMDEADVLGDRIAIISQGKLCCCG
SSLFLKSLYGNGYYLTMVQSNGDEEDNNDDEKDSVEEKSEVFKSPGKYDRLNSFQLEERP
MSAGSVISGNSTRTVKQVEPSLLETADEGYADSNTERSDSDPPTPPPETATMIPGFSVER
VSAFVKKFVSRARLVEDNNAELTFQLPDQAAHDGKFHQLFQALERCHKDLGISSFGISDT
SLEEVFLKVTEEHSKDDELDDELLRNKQEETTDKGRIARSVTRLSFSRKKKKSFLKSLAS
KRHNAKVDTDDLLSETVSVAVGKLQSGESVVSEAVTERGDMGFNHKQMAKITGKWLIVRQ
FLALFIKRFHRVRRSKKGFLCEIILPAIFVLMAMIFAQIAPPLSKEPPLELHPWHYIPKL
GEKKLYMFYSMDGLTTKSQRHLNMLVKNPSVGNRCMNPGIHTITVRLVKVWYNNKGWAAI
VAYTNVMNNLILRSSAPNTSNPSDYGIVTFNHPVEYTKSQLTTKLLRASGVDLVIAICMI
FAMSFIPASFTMVLIEERASNSKHLQFVSGVNPTVYWISNSAWDMLSYFVSCVLMLFIFL
AFGREAYVGSLNGPCLLALLFFYGWAMIPVMHPFSRFFSIPSTAMVTLQSINIFLGTTAT
MATFILEFLEQDDEELKNINILLKKVFLVLPQYCLGRGLMDMSTNQLKADANAEFGFSSG
GPPSPFEFDQVGKNLLALFITGIVFFILNILVEYNFCLRRGLRCYWQRKPTHASLEDEDP
DVARERKRVMEKKNTEDDVLRLECLTKMYGLRGKKGRNTAVDNLCVGVPKGQCFGLLGVN
GAGKTTTFKMLTGDVSVTEGNAYVNGHSILTDMVSVHRSIGYCPQFDAFDNLLTGREILS
FYARLRGVPEKDIKEVAEWAVRRLNLTQYADKLSEGYSGGNKRKLSTAISLIGNPSIIFL
DEPTTGMDPRARRFLWNCINAIVKDGRSVILTSHSMEECEALCSRLGIMVNGRFMCMGST
QHLKNRFGEGYTVIFRVAGERPNLKAVHNFITHQFEGAELKEKHYNMVQYQLKSDVKLSA
LFKQIEGVKRALKIEDYSVSQTTMDQVFINFAKLQTDLLDDEPDKSLPEKDLDTMVTMPI
GGVSGDTMDDESVAGSTLDLISGRNRSISDVDQNSFRDMNGRFEFTDDESLAGSTVDLIR
PGSARSSLRSTHNPDFPNVDIF
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgggtctcagctgcttctgttgatgtggaagaacttcaccctccgccggaga
caaaaggttcgactactacttgaaattatttttccattgactttgttctttatcctggta
attgtccgccagcgtcccgatctgaagactcgacatggcgaatgtcactttgaggggaag
gcgatgcctagtgcagggaacttaccttggctccagggacttgtgtgtacctacaacaat
acatgtcatgacacggtctcgtctggtgagaccgcaggtcagctacagacattcaatagc
acactaataaatgacttaataagagacctgacagatatactgggggaccagtctgccgtg
agggcgttcgacgacctcgtccatgactactatctcctccgggaattgttaggccaggta
cagaacggtacgactacaggtacactaaatcttgggaattttgttggaagccgacagaat
ctgactgaccaacttcagcaacggaacatttctatagcacctgacgctattgatatgatc
ctcaactcaactgtaaacctgaatgattatgatcttgcaactgtgaatgaaatattgaca
gacttcagtacgtgtgaggagagtcccttagtggcgtctgctgatgatttccgtaccttg
atctgtaatactgggaacctctcccagctactgaacttccagagccctgcagactcggcg
tacgttattagtgaagtctgtggtctaagtgatgctgacttcactacagcttttgacgtt
ctgagggatcagtttgacccaaatagtgctgtaaatgagattgacacctttattacaaac
accacgggacggtcgcccagaacaaatccagcagaattatttgcaatctttgagcagatc
agtcagacagttacagattttacgactttgagtaattcggctggggacctggatcctatc
atgaacctgtttcgcgacatcagcagcggaaatgtctcgacatcctcagttggaagtatg
gtgtgtggcagggaaggtactttcttcaactttggtgatgaagagtccaatgacagtcca
gtcacaagaggccaagggagcccagggggccagtctaaccaaggaaacccaggaacaacc
accccagcacctaccaccacaagagggtctgttcgcccaggaataagtctgtcagggggc
ggtgttcgcccaggaataagtctatcagggggcggtcgacaaaacaggtctctaaatggt
aggtctgtcactgtatcatctttatgtataagtctttatatcccaccatctaccaccact
agagggtctgttcgcccaggaataagtctatcagggggcggtcgacaaaacaggtctcta
aatggtaggtctgtcactgtatcatctttatgtataagtctttatatcccaccatctacc
accactagagggtctgttcgcccaggaataagtctgtcagggggcggtgttcgcccagga
ataagtctgtcagggggcggtgtttgcccaagaataagtctgtcagggggcggtgttcgc
ccaggaataagtctgtcagggggcggtcgacaaaacaggtctctaaatgctgatgtctgt
aataatattctgtcctcgtttggtggaggttctgactacatctttagacagctgaggcca
ctgttacagggcaacattttgtactaccccgatacacctgatgtccagatcatcatcaag
gagaccaacaagacatttgaagacttggctaggctgagtgatttagtcattcttctgaat
tctgacacactgatgctggagtcgtctttagacatactgattaacttcacaggctcttgt
ctgtgtgaactagtggagaatgccacggccgggatagacttggcccaatttatcagctcc
cagctatttccactgcccagctttgtgccgagttttctcgtaaacataggcatacaggaa
gctgaagattacatcaacaacaaccaatactatcaaatgatcaagagccctaacgagagc
ttctgtcaattcctaaataattacctggtaaatggctccattggaacaaatgttgacctc
cgtgataccctggcgatggtggagcaagtcacagggatgatttcccagtatacacagaat
tcctcccatctactttttcaaacatggacaagtgttttgttcctaggtctacagtttgat
gtcgtgaagatggacagtagtaaacgtccgacatttgtaaactaccggatacgtatggac
cctgataaggtggacagtacaaagagagtccaggacaggtactggcgcccgggtcccaga
cggactccagccgtcgacaccaagtacacaacatttggcttctcctatatccaggatatg
gtggaccacgccatcatacgtctgcagacagccaacaaacaggacacaggaatcgagctt
cagatgttcccttacccatgctatacagaggataaatttgtgtatgccatttcccgatct
ctgccactgtttttggtactggcctgggtgttgaccgtggctatgatatgtaagaacgtt
gtgtatgagaaggagaagcgactaaaggaagtgatgaagatcatgggccttggtaacctg
gtacactgggtggcttggtttattaacgccttcgtcgtcatgttcatcactatcatcctc
ctcgtcatcctcgtcaagggagggaaggtgctggagttttccgatccgagcgtgctgata
tttttcttcactgtgttcgcaatatcaaccattatccagtgtttcctgatcagcgtgttt
tttagcagagctaacctggccgcctgctgtgctgggtttatctatttcctactataccta
ccctacaacctgtctatacaatgggaggagcagatgacgggaggacacaagttcctcggg
agtctgtcgtctggtgtggcgtttgggttcggctgtagctatattgccctctatgaggag
caggctgtcggtattcagtggagtaacctggcggagaccccgactgtagacgacgagttc
aacatgctgtattgtatcataatgatggcggtcgactcggttatttacgctatcgccgtc
tggtacattgaggcagtgtttcctggtgactttggaatcccgcgcaagtggtacttccct
ttccagaagtcgtattggtgtggtcacaccaatttctctgatgatgggatggcctacgct
atgggagagtccacaatggagctaaatgggtcacctgtacgtacaatggagaaggaaccc
cagcacagacgtctcggcgtcggcatacgtaaactcaagaaagtttatagccaaggcaag
aaggtcgctgtagacggactaacaatgaatttctatgaaggccagatcacctccttctta
ggccacaatggtgcaggcaagactaccaccatgtcaattttgactggactgttcccacca
acagagggcacggcctttatctatgggaaggacatcagaacagatatagatgagatccga
aagagtatcggcatgtgtcctcaacataacgttctgtttgatcatctaactgtggaagaa
cacttgtggttctttgcccgaatgcgtggattgagtcctaaaaaggtggagaaggaaatg
gagcagatgatcaaagatgtgggcctgccacacaaacgcaaggaactctccaacagtttg
tcaggtggcatgaagaggaaactctctgttgctattgccttctgtggtaactccaagacg
gtaatattagacgagcctacggctggtgtggacccgtacgccagacgctccatctgggaa
ctcctgttcaaagtcaagaaaaatcgtaccatcatcctgtcgacccaccacatggatgaa
gctgacgtcctcggagacagaatcgctatcatctcacaaggcaagctctgctgctgtggc
tccagcctcttcctcaagtccctgtatggtaacggctactatctcacgatggtccagtca
aacggagacgaggaggacaacaacgacgacgaaaaggacagtgtcgaggagaaaagtgag
gtattcaaatcaccggggaagtacgacaggctgaacagcttccaactggaagagaggcca
atgtctgctggcagtgttatatctgggaacagcaccaggactgttaaacaagtcgagcca
tctttgttggagactgcagatgaaggctatgctgacagtaacacagagagaagcgatagt
gaccccccgaccccaccgccagagacagcaactatgataccaggtttcagtgttgagcga
gtgtcagccttcgtaaagaagtttgtatctcgggcccgactggtagaggataacaatgca
gagctgacgttccagctccctgaccaggccgcacacgacggaaagtttcaccaactgttc
caggctctagaacgctgtcataaggacctgggcatctcaagctttggcatctctgacacg
agtctggaggaggttttcctgaaagtcacagaagaacattccaaagatgatgaactggac
gacgagttactgagaaataaacaggaagaaacgacagacaagggacggattgctaggtct
gtcacacgactgagcttcagcagaaagaagaagaaatctttcctcaaatctttggcatcc
aaacgtcacaatgcgaaggtggacaccgacgatctgttgtcagaaacagtcagtgttgct
gtggggaaattacaatctggagagtcagttgtgtctgaggcagtgacagagagaggtgat
atgggctttaaccacaaacagatggcaaaaattactgggaaatggctgattgtacgacag
tttttggctctcttcatcaagagattccatcgtgtaaggaggagtaagaaaggatttctc
tgtgagatcatacttcctgcgatatttgtactgatggcgatgatatttgcgcagatagcc
ccacccctgtcaaaagagcctcccctagaactacatccatggcactacatccctaaactc
ggagagaagaaactctacatgttctacagtatggatggtttgactacaaaatcacagaga
cacctgaacatgttggtcaagaatccatccgttggtaacagatgtatgaatcctgggata
cataccattacggttaggctggtcaaggtgtggtacaacaacaaaggatgggcagccatt
gtagcgtatacaaacgttatgaacaacctgattctgaggagttccgccccgaacacatct
aacccgtctgactacggaatcgtcacctttaatcaccctgtagaatataccaagtctcag
ctcacgaccaaactactgcgtgccagtggagttgacctagttatagctatctgtatgatc
ttcgccatgtcctttataccggccagctttaccatggttctgattgaggagcgcgcctct
aactccaaacatctacagtttgtcagcggtgttaaccctacagtatactggatatctaac
agtgcctgggatatgttgagttactttgtatcctgtgtactgatgctgtttatcttcctg
gcgttcggacgtgaggcttatgttggttcattgaacggcccctgtctactggcccttctc
ttcttctacggatgggccatgatcccagtgatgcacccgttcagtcgattctttagtata
cctagtactgccatggtaacacttcagtcaatcaacatcttcctaggcaccaccgcgact
atggcaacctttatcctagagtttctggagcaggacgatgaggagctaaagaacatcaac
atcctcctgaagaaagtgtttctggtgttaccccagtactgcctgggccgagggctcatg
gatatgtccactaaccagctaaaagctgatgccaatgctgagtttggtttctcctccgga
ggcccaccaagtccatttgagtttgatcaggtcggtaagaatctgttggcactcttcatc
acagggattgttttcttcattctcaatatccttgttgagtacaacttctgtctgagacgt
ggccttcggtgttactggcagagaaagcctactcatgccagtctggaggacgaagatcca
gacgttgcgcgagagaggaagcgtgtgatggagaaaaagaatactgaagatgatgtactg
agattggaatgtctcacaaagatgtatggcctgcgaggtaagaaaggacgaaacaccgct
gtagataacctgtgtgtgggggtccctaagggtcagtgctttggtctgctgggagtcaac
ggggcagggaagaccaccaccttcaagatgttgactggtgacgtcagtgttaccgagggc
aacgcctacgtcaatggtcacagtatcctgactgacatggtcagtgtacacagaagtatt
ggctactgtccacagttcgatgcctttgataatctcctcactggaagggaaatactctcg
ttttacgccagacttcgtggcgtcccagaaaaggatatcaaagaggttgcagagtgggcc
gtgaggagactgaacctaactcagtacgctgataaactgtcagaggggtactcgggagga
aataaacgcaagctgtccacagccatctctcttattggaaacccctcaattatattcctg
gatgagccgacaacagggatggatcctcgggccagaaggtttttgtggaattgtataaac
gccattgttaaggacggtcgatctgtcatactcacctcacacagtatggaggagtgcgag
gctctctgtagtcgtctgggaatcatggtcaatggaaggtttatgtgtatgggtagtact
caacatctcaaaaataggtttggagagggatacactgtgattttccgtgtggcgggagag
cgacctaaccttaaagcggtacataacttcatcacccatcaatttgaaggagctgagctg
aaggagaagcattataacatggtacaataccagctcaagagtgatgtcaagctctccgcc
ctcttcaaacagatcgagggagttaaacgtgctctcaaaatcgaggattattctgtatct
caaacaacaatggaccaggtgttcattaactttgccaagctacagacagacttgttggat
gatgaaccagacaaaagtttaccagaaaaagatttggataccatggttaccatgcctatt
ggtggtgtgtcgggagacactatggacgatgaaagcgtcgctggcagtacattagatctg
atctctggcaggaatagaagtatatcagatgttgaccagaatagtttccgggatatgaat
ggacgcttcgagtttacagacgacgagagtttggctggcagtactgtggaccttattcgt
cctggcagtgcccgaagtagtctacgcagtacacacaaccctgatttccctaacgtggat
atattctag
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integrated database retrieval system
