Argopecten irradians (bay scallop): 138326554
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Entry
138326554 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138326554
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Gene cluster
GFIT
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NCBI-GeneID:
138326554
NCBI-ProteinID:
XP_069128752
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Position
6:45189232..45274215
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AA seq
1263 aa
AA seq
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MLSSDLYHKMASFMSPGVMPPPTHQDVMDSTGRLVDKHMQDDRNYLDLSDQLKVPVHNQP
CISGLNELDYPSLSEARVGLECLPEISNAKLVPLPPELMEQFGRMQCNCMMGLFPDVERA
WLAIDSDIFVWRYEDGSDLAYFDGLSETILSVALVKPKVGIFQPHIQYLLCLATPVDIVL
LGVSFSQPRDGIPGELGNGEMHLLPEPLFSIPTDNTYIVNIIGSDNGRIFMAGKDGCLYE
LAYQADDGWFSRKCRKINHSTSTLSFLIPSFLNFSFSEDDPLLQLSLDQSRHILYARSEK
GTIQVFDLGQDGSSXGKVASIPLQTTVQNAWHIARTIERSNFKPLVHISAITRQESTNIH
LVAVTKSETKQYPTTYQNEQKQAISIQPTTKMKPSNIHTTYHKNGTLLLVSSQSEESDAM
WTISGDSFPFQSQLMEAQTTIPINGRTWAVCEIPPPALEPGIFRQDKSGNVKADPPAVVT
QHTELPRRFILLTAQGSHILCKLRPVDQLRQLLIDCQGPDAEEVKGFFRLHRIEQACATC
LILACSRLAADQPVANWATMAFFMYGGEAQYNYAGGGMAMDRSLMATNIGPAGKKTRRIQ
NELVFIVLNISSPTLTSPIQCLWSLELLCPAVIPCCLYFLGEAQKMEKISLQHIQDLIHR
IEEVLGLLKILVDHQFHIVVSQLPKDQQNQLRTMMFKHLVVSGKDICASLITCLINRYLD
DNATIDAINNKLREICPSLYSSDDATCSKASELLQAARVNQNQAEKIRQLGEALKLYKNV
SQPLQLTVVCSQFANVHYYDGIVDLCLTLAHKRDPQNLAIHFYRSGEPPEDLQGMSAYMS
RMECYNCITGTLGFLSTTSTSFPQAPKVPGPPPTPDPSRLSPQEADQFKSDIFRLALKSE
DELFHVALYDWLYSMNQTEKLLEIQSPFMEPYLKRKTGYQAEAMGALDMLWKYYEKSRNF
PAAAKILSRLADRHGTDVRLQQRIEYLSRAIMCAKSSTSRTCSAAEGEFLHELEEKMEVG
RLQLQVQNALSKRRDRNHQSITEALSRLDSDLLDLTLVTVXEEFADKFDLSECKLAILTT
VLGLFDAALVENLWQSIIDKEVDATIGMAIPNRIKNIRNKMEPIGKQYIKTERYFPLAFL
VKYIEQRSCELGFTPSWVYEMLLEIGVPPPKLLEIYDRMFKSRDPYWQTIQQPLHLLDVL
SHLLSHLTANPSLISTYERRPFSTLCLDFVATYLVELQTMRMTDHHRRLVAQFKRLQSEL
ERM
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctctgatttgtaccataagatggcttcctttatgtcgcccggagtgatgcct
ccccccactcaccaggatgtgatggacagtacggggagactcgtcgacaaacacatgcaa
gacgatagaaattatctggatctctcagatcaactcaaagttcctgttcataaccagccc
tgcatcagtggcctgaatgagctggactatcctagtctttctgaagccagagtcggactc
gaatgtttgcctgagatcagcaatgccaaacttgtccctcttcctcccgagctcatggaa
cagtttggacgtatgcagtgtaactgtatgatgggcctgttccctgatgtggagcgagct
tggctggctattgatagtgacatatttgtgtggagatatgaagatggaagtgacttggct
tacttcgacgggctgagtgaaaccatcctgagtgttgcgttagttaaacctaaagttgga
atttttcagccccacatacagtaccttctgtgtctggccacgccagtggacattgtcctg
ctcggggtcagtttctcacaacccagagatggaataccaggagaacttgggaacggtgag
atgcacctgttaccagagccactgttctccatacctacagacaacacatacatcgtgaac
atcatcggctcggacaatggacgtatatttatggcagggaaggatggttgtctttatgag
ctggcatatcaggcagatgacggctggttcagtcgaaagtgccggaagattaaccattcg
accagcacactctctttcctcatcccatcgtttctcaacttcagcttcagtgaggacgat
ccactattacaactaagcctggaccagtctcgacatatactgtacgcacgctcagagaag
ggcactatacaggtatttgatcttggccaggatggtagcagtnatggtaaagtagcttca
attccactacagaccactgtacagaatgcctggcacatcgctcggaccattgaaagatcc
aacttcaagccactagttcatattagtgcaataacaagacaggaatctaccaacatccac
ctggtggctgttactaaatcagaaactaagcaatatccaacaacctaccaaaacgaacag
aaacaagcaatatccatacaacctaccacaaaaatgaaaccaagcaatatccatacaacc
taccacaaaaatggcacattactgttggtgtcgtcacagtcagaagaaagtgacgccatg
tggacaatcagtggagattccttccccttccagagtcagctcatggaagcacagacgacc
attcctattaacggtaggacttgggctgtatgtgagatccctccacctgcgttagaacct
ggcatattcaggcaagataagtctggtaacgtgaaggctgatccaccggctgtagtaaca
caacacacagaattacctaggcggttcatcctcctcactgcacagggaagtcacatcctc
tgtaaactacgaccagtggaccagttaagacagctgttgatcgactgccaaggaccagat
gctgaggaagttaagggattctttaggctccacaggattgaacaagcctgtgccacatgc
ctgattctggcgtgctctcgacttgcagctgaccaaccggttgcaaactgggcgacgatg
gcgttctttatgtacggtggtgaggcccagtataactacgctggtggagggatggccatg
gaccgctctctgatggccaccaatattggacccgcaggtaaaaagactcgaaggattcaa
aatgagttggtcttcattgtgttaaacatttctagtccgactctgacctcccccatacag
tgcctctggagtctagaattactctgccccgcggttataccttgctgcctgtattttcta
ggtgaagcccagaaaatggagaagatttctttacaacacatccaagatctgatccacaga
attgaggaggtgttgggtctactgaagatccttgtagaccaccagtttcatattgtcgtc
agtcagttacccaaggaccaacagaatcaactgcgaaccatgatgtttaaacatcttgtt
gtcagtggtaaggatatctgcgcctccctgataacatgccttatcaatcgttaccttgac
gacaatgctacaatagatgctatcaacaataagttacgggaaatctgtccctctctttac
agcagtgatgatgcaacatgttccaaggctagtgaactgttgcaagctgcacgagtcaat
cagaatcaagcagaaaagataagacagcttggggaggcattgaagctctataagaatgtg
tcgcagccgctccagctaacggtcgtgtgtagccagtttgccaatgttcattactatgat
ggaattgttgacctgtgtctcaccttggcacataaacgtgatccccagaatctggccatc
cacttctacaggagtggggaacccccggaggatctccagggaatgtcagcttacatgtcc
aggatggagtgttataactgtatcactgggacactaggattcctgtctaccaccagtaca
tcgtttccacaggcaccaaaggttcctgggcccccgccaacccccgaccccagcaggctc
tccccacaggaggccgaccagtttaaatctgacatattccggctggccctgaagagtgaa
gatgaactgttccatgtagctttgtatgactggttatacagcatgaaccagacagagaaa
ttattggagattcaatcgccatttatggaaccgtacctgaaaaggaagaccggttatcag
gctgaggctatgggagcattagatatgttgtggaaatactatgaaaaaagtcgtaacttt
cctgctgctgccaagatcttgtcaaggctagcagatagacacggaactgatgtgagacta
caacaaaggattgagtacttatccagagccattatgtgtgccaaaagttccacgtcacgc
acctgttctgctgcggaaggtgaattcctgcatgaactggaggagaaaatggaggttggt
agactacagctccaagttcagaacgctttaagtaaaagacgagaccgtaaccatcagagt
attacggaagctttgagtcggcttgattctgatctgctagatctcaccctggtgactgta
tgagaggagtttgcagacaaatttgacttgtccgagtgtaaactggccattttaaccact
gtgctggggttgtttgacgctgctctggtagaaaacctatggcagagtatcattgataaa
gaagtagatgctacgattggaatggccattccaaacagaataaaaaatatcaggaataaa
atggagccgattgggaagcagtatatcaagacagaacgatacttccccttagcatttctg
gtgaagtatatagaacagcggagttgtgagctgggtttcactccctcctgggtgtacgag
atgttactggagattggagtaccgcccccgaaactgttagagatatacgacaggatgttc
aagtctcgagatccatattggcagaccattcaacaaccattacacttgctggatgttcta
tcgcatctcctatcacatcttacggctaacccatctcttatatcaacatatgaaaggcga
cccttctccacgctttgtctggattttgtggcgacctacctggtggaactacagaccatg
agaatgaccgatcatcaccgaaggcttgtcgctcagtttaaacgattacagtccgagcta
gagaggatgtga
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