Argopecten irradians (bay scallop): 138326868
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Entry
138326868 CDS
T10542
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138326868
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
airr01001
]
138326868
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138326868
03036 Chromosome and associated proteins [BR:
airr03036
]
138326868
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
138326868
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138326868
Protein kinases [BR:
airr01001
]
Serine/threonine kinases: Other
TAF1 family
138326868
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138326868
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
138326868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
138326868
NCBI-ProteinID:
XP_069128956
LinkDB
All DBs
Position
7:complement(9005139..9047916)
Genome browser
AA seq
1852 aa
AA seq
DB search
MDSEEEHDHDHDHDHDHDHDHDHDGEGTGAVSSLTGFLFGNIDKKGDLEEDFLDEDSKRQ
LGSLSALGGIGTMVREITEDQPGADEGARAGDLDESSLNYEKKVAGAVDYSDITEMADDG
SERVREAMGNLHSLKSENEEDDYDEDDNKLMPPPSWLPNKSGKSDGEGGETTPTKSEKGS
LSDSPDKSKFKTPLAAMLPPELSKVEVTTLFPEFQLGEVLRFSRLFKPVHTPHVWRRKKK
KKTEDEEQDEAELKKKEEEEKMSPLQKVIAHTNEEREQAENRRAILESQATEDKDEDGEE
DSFKLNLGRPAQAEECLSDDEEKMLRTEEEKSLTDQSKTVGESDQSLKIEPWRYGPAQYW
YDFMGADEFGRDFDYGFKLKTEDREDEVCLNPNPKKVEFSDEVFLMVTQLQWEDDIIWNG
EDVKHKVIASLKQKAPSAGWIPSTSHRTATQFTTQGKPSDIISGLTPKVPILNPGYSKTI
PGMSPIIKQGEGPDSKDKIYSIFPIENQELIYGRWEDNIIWDAENMTTIPKPQVLTLDPN
DENIILELPEDNDPDAKSVPAKKEKEIKKSKLLLNKAGITKEEEEDEEKNAPNLQEKDPF
NISNDEYYSPKTMENAVKGNLGGSLIQHSTPSLELRQPFFPTYMGIGKLRTFHRNSLKRY
SHGVLSQPGPHPVLPLLKQIKRKARLREQERQAYGGGEIFFMRNAQDLTGMDGELILAEY
SEEYPPLVMQIGMATKIKNYYKRKPGKDASPPQYKYGELAYAHTSPFLGALSPGQCIQAF
ENNMFRASVFEHKVPDTDFVIIRKRDNYYIREVSTVYCVGQEATLTEVPGPNSKRANNFI
RDFLQVFIYRLFWKSKDSPKRIKMDDIKHAFPSHSESSIRKRLKLCADFKRTGMDSNWWV
LKPDFRLPTEDEMRAMVSPEQCCAYYSMLAAEQRLKDAGYGERSLFAPEDDNEEETQMKI
EDEVKTAPWNTTRAYIASLKGKCLLDLTGVADPTGCGEGFSYVKVPNKPQPKEEGQQQTP
QKKTVTGTDADLRKLSLKDAKQLLRKFGLPDSEIRKLSRWEVIDVVRTMSTEQAKAGQDG
QGEWLIVSIGPPTIGYCPTDDDSSSGIESDFEEMLSHEREEAERRELHKMMLEDSKDKGK
QKEEDINAANMAGRKLKITRTFRNDEGKEYTRTEWVLKPAVIDTYVRIREKKDPSFIKNF
AAMDDSMKEDMRREKRRLQERLRRIKRNEEREKFAPPPIKKKKKQEPISIKASKLKCGAC
GQIGHMRTNKECPNYNKVGNVAPVQVAMTQEEEEEEEKNLLVDNDLINVEGTKIKFSKNL
VEHAEQVKRKSLLLKFPKQAFKPEKKKRVGSIIHCDYLKKPKQTSNRRRTDPIVTLSTVL
ESVLNEMRDLPNAQPFLFPVSTKEVPDYYKVVKIPMDLQTIREGLRNKKYISRETFLIDV
NQILENSKMYNGAKSALTLTAQQLLNLCLKRFAEKEDKLMRLEKAINPLLDDNDQVAFTF
ILENIIAQMKAVENSWPFHAPVNKKFVKDYYEVIPNPMDLGTLLKRVQAHKYQTRETFME
DVELIPINCSKYNGKDSPLTETAQRMADVCRQALSQNEEHLIQLEADIRAAQEAALEAVE
TDSIMTGTSANPDDYSFLGMDNESNDEANSLGTSRENITIAEDNSSPSKRWAGDDSGMSG
GGVPEEYDSEFVDVEGDEENAVDMNYSQQSSDRTSDQVMNTTGEVDESLANDLQISPENS
DIEDQVLGKASDSDEEGDASMDAQNYYDNNGQQYMDHAPQDVDENSFDPSDFFMHSSLAR
EAAAQHVMENKDGDINMDLQVSESEESEAEQEGAEQTEEQSNDGFDIDEFLH
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaagaggaacacgatcatgatcatgaccatgaccacgatcacgatcatgat
cacgatcatgatggtgagggcactggagctgtttcatccctcacaggatttctgtttggg
aacatcgataaaaaaggagacttggaagaagatttcttggatgaggattcaaagcgccag
ctcgggtcccttagtgccctgggaggaattgggacgatggtgcgggagatcacagaggac
cagccgggggcagacgagggagctcgagcaggggaccttgatgaatccagcttgaactat
gaaaagaaggtggcgggagccgtggattattccgacatcacagagatggctgatgacggg
tcagagagagtacgagaggcaatgggtaatctacactcactcaagtcagaaaatgaggag
gatgactatgatgaagatgacaataaactgatgcctccaccatcctggctccctaacaaa
tcgggcaaatccgacggggaaggaggggagacaactccaactaagtcggagaagggatct
ctgtcagatagtccagacaagtccaagtttaaaactccgttagctgccatgttacctcca
gagttgtccaaagtggaagtcactacactgtttcctgagtttcaacttggagaggtgctg
aggttttcccgtctattcaagcctgttcatactcctcatgtctggagaaggaaaaagaag
aagaaaacagaagatgaagaacaggatgaagcagaacttaagaaaaaggaggaggaggag
aaaatgtcgccgttacagaaggtgatagctcatactaatgaagagagagagcaagcagag
aaccgcagggccatcctggaatctcaggccacagaggacaaggatgaggatggggaggag
gatagcttcaaactgaacctgggacgtccagcccaggccgaggaatgtctgtcagacgat
gaggagaaaatgctgaggacagaggaggaaaaatctctcactgatcaaagcaaaactgta
ggtgaatctgatcagagcttgaaaatagagccatggcgatacgggcctgcacagtactgg
tatgacttcatgggggctgacgaatttggacgtgactttgactacggcttcaaactcaaa
acggaggacagagaagatgaagtttgtcttaatcccaatcctaagaaagtggagttttct
gatgaggttttcctgatggtgacacagctacagtgggaggacgatataatctggaacggg
gaggatgtgaaacataaagtgatagcctccctcaaacagaaagctccctccgctggctgg
atcccgagtacatcacatcgtacagccacacagttcacaacacaaggtaaacctagcgac
atcatcagtggtctgactcccaaggtgccaatcctaaacccgggctattccaagactata
ccaggcatgtctcccatcatcaagcaaggagaaggtccagactccaaggacaagatctac
tccatcttccctatagagaaccaggaactgatctacggacggtgggaggacaatatcatc
tgggacgctgagaacatgacgacaattccgaagcctcaagtcttgactcttgatcctaac
gatgaaaacatcatactggagctgccagaggacaacgatccagacgctaaatcagtacct
gctaaaaaagaaaaggaaataaagaagtcaaagctgttactgaacaaggccggtattacc
aaggaggaggaggaagacgaggagaagaatgcacccaacctacaagagaaagatccattc
aatatttctaatgatgaatactatagtcctaaaactatggagaatgccgtgaagggaaac
cttgggggaagtctcatacagcattccacaccaagccttgagttacgacagccattcttc
cctacatatatgggtataggcaagctgcgaaccttccatagaaattcactgaagaggtat
tcacatggtgttctgtctcagcccggaccacaccctgtcttaccgctccttaaacagatc
aagaggaaggccaggttgagagaacaagagagacaagcgtacgggggaggtgagatcttt
tttatgaggaacgctcaggacctgacaggaatggacggggaactgatcttggctgagtac
tcagaagagtatcctcccttagtcatgcagattggcatggcaaccaaaataaagaattat
tataaaaggaaacctggaaaggatgcgagtcccccacagtataagtatggtgagctggcc
tacgcacacacttctcctttcctcggggcactcagtccgggacagtgtatccaggcgttt
gaaaataacatgttccgtgcatctgtgtttgaacataaagttcctgatacagattttgtc
atcattagaaagcgagacaactactacatccgtgaagtatccactgtgtactgtgtgggt
caggaagccacactgactgaggtgccgggccccaactctaaacgggccaacaacttcatc
agggacttcctacaggtctttatctatcgactgttttggaagagcaaggattcacctaag
agaattaagatggacgatatcaaacatgcatttccatctcattctgagagcagcatcaga
aaacggcttaaattatgtgcagacttcaaacgtacaggaatggactctaactggtgggtc
ctgaagcccgacttccgtctgcccaccgaggacgagatgagggccatggtatccccggag
cagtgttgtgcctactacagtatgttggcagccgaacagcgactcaaggatgctgggtac
ggagagaggtcattgtttgccccagaggatgacaatgaggaggagacacaaatgaagatt
gaagatgaggtaaagacagctccttggaatacgaccagggcgtacatcgcgtcccttaag
ggtaaatgtctcctggacctgacgggtgtggctgaccctacagggtgtggggagggattc
tcctacgttaaggtacctaacaaaccacagcctaaggaggaagggcagcaacagacgcca
cagaaaaaaacagtgacaggaactgacgctgatctccgtaaactctcactcaaggacgct
aaacagctacttaggaagtttggactgccagattctgagattcgtaaattgtcgagatgg
gaggtgatagatgttgtgagaaccatgtcaacagagcaggccaaagcaggacaggatggt
caaggtgagtggctcattgtgagtattggtcctccaacgatcgggtactgtcccactgac
gatgattccagctctggaatcgaatcggactttgaggaaatgctgagccatgagcgagag
gaagcagagagaagggagctacacaagatgatgttagaagacagtaaagacaagggtaaa
caaaaggaggaggatataaacgcagccaacatggctggtcgcaaattgaagatcaccaga
acatttagaaatgatgaagggaaggagtacacaaggactgagtgggtgttaaagccagct
gtgatagatacatatgtgaggattcgtgagaaaaaggatccttccttcataaaaaatttt
gcagcgatggatgattctatgaaggaggacatgagaagagaaaaaaggagactacaggag
cgactgcggaggattaagagaaatgaagagagagagaaatttgccccacctcctattaag
aaaaagaaaaagcaagaaccaatatccatcaaagcaagcaagttgaagtgtggtgcgtgt
ggtcagatcggacacatgcggaccaataaggaatgtcctaactacaataaggtgggtaat
gtggcgccggtccaggtggccatgacacaggaggaggaggaagaggaggagaagaacttg
ctggtcgacaatgacctgattaatgtggagggcacgaagatcaagttctctaagaacctg
gtggaacatgccgaacaagtaaagaggaagtctctcttactaaagttcccaaaacaggcg
ttcaaaccagagaaaaagaaacgagttggatcaattatacattgtgactacctcaagaaa
ccgaagcagacatcaaaccggagacggactgatcctatagttacgctgtccactgtgtta
gaaagtgttcttaacgagatgagagacttacctaatgcacagcccttcctgtttccggtc
agcaccaaagaagttccagactactacaaggtggtcaagatccccatggacctacagacc
atcagagagggtctcagaaataaaaaatacatttctagagagacatttcttattgatgtc
aatcagatcctggaaaacagcaagatgtataatggtgctaaaagtgcattgacactgaca
gcacagcagctattgaacctgtgtctgaagagatttgctgagaaagaggacaaactgatg
agactggagaaggccatcaatcctctgttagacgataacgaccaagtggctttcactttt
atcctcgagaatatcatcgctcagatgaaggcagtagaaaattcctggccattccatgct
ccggtcaataaaaagtttgtcaaagattattacgaggtcatccccaatccaatggacctc
ggaacactgcttaagagagtccaagctcacaagtaccagacaagagaaacttttatggag
gatgttgagcttatccccatcaactgtagcaagtacaacggcaaggatagccctctcacg
gagacagctcagaggatggcagatgtctgcaggcaggcactctctcagaatgaagagcac
ctgatccagttggaggctgatatccgcgcggcccaggaggctgcattagaggcggtggag
acagatagtatcatgacaggcacgtcggccaaccccgacgactacagcttcctaggtatg
gataatgagagtaatgatgaagcaaacagtttgggaacatctcgggagaacatcaccatc
gccgaggacaacagcagtccatcaaaacgctgggctggagacgactcgggcatgtcagga
gggggtgtaccagaagagtatgattccgagtttgtagatgtagagggagatgaggagaac
gctgtggacatgaattacagtcaacagagcagtgaccgcacatcagaccaggtgatgaat
accacaggtgaagttgacgagtctctggctaatgatctacagatatcacccgagaactcc
gacattgaggaccaagtattaggtaaagcaagtgacagtgatgaggaaggtgatgccagt
atggacgcccagaattactatgacaacaatggccagcaatacatggaccatgcccctcag
gacgtcgatgagaacagtttcgatccctccgacttcttcatgcacagttcactagccagg
gaggctgctgcccagcacgtgatggagaataaggacggtgatattaacatggatttacaa
gtgtccgagtcagaggagagcgaagccgagcaggaaggagcagagcaaacagaagaacaa
tcgaatgatggcttcgatatcgatgagtttctacactga
DBGET
integrated database retrieval system
