Argopecten irradians (bay scallop): 138327250
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Entry
138327250 CDS
T10542
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138327250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
airr03009
]
138327250
Ribosome biogenesis [BR:
airr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138327250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WDR55
ANAPC4_WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
138327250
NCBI-ProteinID:
XP_069129328
LinkDB
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Position
7:43973589..43983022
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AA seq
527 aa
AA seq
DB search
MRAFATKTDLLIVYKIQIDAEEKRKRHEKTHGASRLQIKMLRRKLHAKNKQTKHSSSKPS
RTFSRKQALGLTKKSKDVEEEVLEGLVLGTPDDIIRNLDVGKRKNLTETEEEEFEVEHEP
PQKREKKPAWEDVDDTVGSVQMTKAKKFDGMKQGEECRIRTDQYTVRLKSKFEKVSSNPN
WSKFRADAVRQTGSDDDSDTEELTTRTGNFLTTDKSLPKGYLQIKQCPNANRDSPPQGKL
YAVEFHPSAQVILTAGSNQTLSLFQVDGKNNPKIQSVFLDNFPIFSAHFTPDGQQVVLSS
KHRSFVYYDMIAGKVVNVPKIKGLGETRMKNFMMSPDGRFLVFLGSHGHMHLISAKVIIF
EDFVLLFKWIQVTKWIKMNGNVEVNYPFTRDGDEDLVLPWRNFAHDHIFCKLSRSYSGVV
NIYETETCRTSRTPKPLKALMNLTTPCTDAIFNPSSEILAMSSNFTEKAVKLAHLPSMTV
FSNYPERQDQELRIARSMDFSPNGGYFTVGTNKGSALLYRVKHYGNY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgtttgcaaccaagacggatttactcattgtgtataagatccaaatcgacgcg
gaggagaagaggaaaagacacgaaaaaacacatggtgcaagcagacttcagataaaaatg
ttgcgtcgtaaacttcatgcaaaaaataagcagaccaagcactcttctagtaaaccaagt
aggacattttctcgtaagcaagctttaggattaacgaagaagagtaaagatgtcgaagag
gaggtcctggaaggactcgtcttggggaccccggatgacattataagaaatctggatgtg
ggaaaacgaaagaatttgacagaaacagaagaggaagagtttgaagtagaacatgagcct
cctcaaaaaagagagaagaaaccagcatgggaagatgtagatgatacagttggaagtgtc
caaatgacaaaagcaaaaaagtttgatggcatgaagcagggtgaggaatgcagaatacga
acagaccagtacacagtgcgattgaagtctaaattcgagaaagtatcttccaatccaaac
tggtcaaagttccgagctgatgctgtccgacagactggatctgatgatgacagtgatact
gaagagctgacaacaagaacaggaaactttttaacgacagacaagtcccttcctaaaggc
tacttacagataaaacagtgtcctaacgctaacagagactcccctccacaggggaaactg
tatgcagttgagttccatccatcagcacaagtgattctcacagcaggttcaaatcaaacg
ttgagtctgttccaggtagacggcaagaacaatccaaagattcagagtgtctttttagat
aacttcccaatcttctctgcacatttcacaccggatggtcaacaggtagttctcagttcc
aaacaccggagttttgtttactacgacatgatcgcaggaaaagtcgtcaatgtgccaaag
ataaaaggacttggagagacgaggatgaagaattttatgatgtcacctgatggtcgtttt
cttgtgtttttgggatcccacggccacatgcacctaatctcagccaaggtcatcattttt
gaagattttgtgttgctttttaaatggattcaagtcacaaagtggattaagatgaatgga
aatgtcgaggtcaattatcccttcacaagagatggggacgaggaccttgtactcccatgg
agaaattttgcacatgatcacatattttgtaaattatccaggtcatacagcggagttgta
aacatctacgaaaccgagacttgtcgtacatctagaacacctaaacccttgaaagcactg
atgaacctaacaacaccctgtacagatgccatcttcaacccgtcatcagaaatactggca
atgtcttcaaacttcacagagaaggccgttaagttggcccatctgccctctatgacggtg
ttctctaactacccagagcgacaggatcaggaactacgtatagcccgatcaatggacttc
tcccctaatggtggctacttcactgtcggcacaaacaagggaagtgccctattgtatagg
gtgaagcactatgggaattattga
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