Argopecten irradians (bay scallop): 138327293
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Entry
138327293 CDS
T10542
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138327293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138327293
03036 Chromosome and associated proteins [BR:
airr03036
]
138327293
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138327293
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138327293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
138327293
NCBI-ProteinID:
XP_069129364
LinkDB
All DBs
Position
7:complement(3125550..3180115)
Genome browser
AA seq
1844 aa
AA seq
DB search
MFGAKPISFGFPANTNVGTATPFGAGNNSFGAKPAGTTAFGTPNAGGVFGAQPAAAPTGG
LFGQTNTSTGGGLFGSQPAGGTFGQSQSGGFTFGSTPATGSSSGGSLFGQQPQQSTGGGL
FSTPATGNAFGSKTPGFGGFGATSTPGTGSNLFGQQTSNTSLFGTAGTSGFGQQQQQNAQ
VGTALKFSAPVSQDTMVKNGVSSHISTRHQCITAMKEYQNKSLEELRVEDYLAGRKGKQS
AIFGATPASSSTGFSFNKPQATGFAASAAPFGTTPAATQSSLFSQPQNQTATASPFGQNK
SIFGATQGTATSTTGFGTGFGNTGTSLFGNNQAKPAGFGATAVTSAQPSLFGNTSFGGAT
SGGFGNTGGFGTAATGGGLFGAKPKPLFGTAATSAPTGFGVSQSSNLFAKPANSTGTGLF
GNTTTSTFGASTGFGGFSNATFGTGNSLFGNKPLGFGATSTPSLALNNNTFNNTLSKPAF
GGFGNTAPAFPGLSGNTQLNLGNTTLSTAPSAVANSANQLQIQQQLLNLVNSPYGDSPLF
MNLKQSEVKREELLKPTNPAAQKAALSNQFKVSPRPTARVKPKSLHGVLNGSKSQMFEGL
EDEGFSFGNETFQPKKSIKKLVIKKGASDSSSPGSRSSSVVGEPSQQLSVLETDGPDLPN
TSLNMPPEPVIQLPQVSPPVQKPGNQSMDDTMAMLNVPKIPNRITSRSPDETDLDISQAE
DSMERRPTTPPPPHAADVTLTRPGYYTIPSMEELGDMVDEQGECFVDGFTIGRERYGSIY
FPGVFSVAGLNLDEIVHIRRKEVVVYPDDDNKPSVGDGLNRKAEITLDCVWPIDKSDRTP
IKSPERLAAMNYQEKIEEITHRIGGRFIDYRPETGSWVFEVKHFTKYGMDDSDEEDLSNL
AQKQQKTGQQKPGLSQQLPMGQGQSYIPPQPTNGIAPPPKFSLDISQQAMDDRAVPMGED
DDVPDLSHKDVTEEFVNEMGEEEFEGQDEGPSSHRLAASMGVSTHSMQMMKASFFGDEEK
TPGGDGDMASEKRSDTTDKHGPSLFSSAYKSKFMSPVKLSQMPQTTDFREQQGMFPPRIH
TPEPIRPAKKNFQYPPVAEHMILASGMKPEDLPQKIVGSRVQREIPEFSKSEMYGKQNMI
KDAALFMGRSFRVGWGPNWTLAHCGTPITKEITEEKDAVRFSLLSGGRTRPAVDSTYEWK
VTLEKVDVAGYFRQEDTTVLHNHEELLMIQLDHSEKMKSDSCPQFVPSPGVDAIHQYADR
TKLDKQDTEGHPDYDSLSHMTTVFDLCVSLWGRLPAFQDLDDIEDCYDYHHDRREALSQW
LMHTSKEVIKKEISDAKYKNKNHLPAVLAHLSGNQIAEACSLAQASSDHRLALSLAQAAG
SHTPRQLVESMLNEWIELEACEYLDPMRQKIYSLMAGRLVWPTPDSTVNTCEYMDWKRAL
ALHLWFLCPPCCAIQQALEEYDNGFLGVTTYGRYCNPPLPPYLEQTTDLSTMGTDENLEI
QDTCYHLLKLYSQRSHNLQPLLNPSSSTSSHLDYRLSWHLHQSLDALGYRHLSSYHRNSI
HMNFASQLESLGLWEWAVFAVLHIEQQAYRESAVRELLLRHISLSKDHFYQEKEQFLREK
LDVPAEWIHFAKAMRARFENRPHDEAWHLLKSGHWNDSHRVVLKHIAADAIINENHDYLR
KFLAELSPPTRCNKVVDWPRGGHVFMDYINLCQELENLKRDLLARSYSEDLQTDGASSYS
DDLQKDGHVSNVHVEGLQSDVMSLCSRVESLVCANSKDRLCQSEMSKKCAHLLRTLISIQ
DPTGDHLLSSLVAPHISRLPMPGDYRLQELNELVRNNIIETTVT
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaaccaatatcctttggcttccctgcaaataccaatgtagggacagct
acaccgtttggagctggcaataacagctttggtgctaaacctgcaggaacgactgccttt
ggtaccccaaatgctggaggcgtatttggagcccagccagctgccgccccaacaggcggc
ctgtttggacagacaaacacaagtacaggcgggggattgtttggatcacaaccagcaggt
ggaacctttggacaatctcagtctggaggattcacgtttggcagtacccctgccacaggc
agtagcagtggtggcagtctatttggtcagcagccacaacaaagtaccggaggtggccta
ttctctacaccagctacaggcaatgcattcggctcaaagacccccggatttggagggttt
ggggctaccagcactccaggaacaggaagcaatttatttggacagcaaaccagtaacaca
tcattatttggaacagcagggaccagtgggttcggtcaacaacagcaacagaatgctcaa
gtaggtacggctctcaagttcagcgcccctgttagtcaggacaccatggtcaagaatggt
gtgagcagtcacatcagtactcgccatcagtgtataacggccatgaaggagtaccagaat
aaaagtctcgaggaactccgcgtggaggactacttggctggaaggaaaggtaaacagtca
gcaatatttggggcgacacctgccagttctagtaccggcttcagctttaacaaaccacag
gcaacagggtttgcagcttcagcagcaccctttgggactacaccagcagcgacacagtcc
tctctgttcagtcagccacagaaccagacagccacagctagcccttttggccagaataag
tccatctttggtgctacacagggaacagccaccagtactactggatttggtactgggttt
ggaaacacagggacatccctcttcggaaacaaccaggcaaagcctgctggatttggagcg
acagctgtgacctctgctcagccatccctgtttgggaacacatcctttggtggagcgacc
tccggaggctttggtaacacagggggatttgggactgccgccacagggggtggtttattt
ggagctaaacctaagcctctgtttggtacggctgctacgtcagctccaacaggatttgga
gtgtcacagtcctccaatctctttgctaagccagccaatagtacaggcactggcctgttt
gggaacacgacaacttcgacatttggagctagcactggttttggagggttcagtaatgct
acttttggcactggtaacagcctgtttggaaacaaacctttaggatttggtgcgaccagc
accccaagtctggcactcaataacaatacattcaataatacactcagcaagccggcgttc
ggaggcttcggcaatacagccccagccttcccaggactgtctggaaacactcaactaaat
ctgggaaacaccactttaagcacggctcctagcgccgttgctaattcagccaatcagcta
caaatacaacaacagttgttgaacctggttaactccccttatggtgactcaccactcttc
atgaatctgaagcagagtgaagtaaagcgtgaagagctcctgaaaccaaccaatccagct
gctcagaaagcagctctaagtaaccagttcaaggtcagtccacgacctacagctcgtgtc
aaacccaaatctcttcatggtgtcctcaacggttcaaagtcgcagatgtttgaaggccta
gaggatgaaggattcagctttgggaatgagacattccagcctaagaagagtattaagaag
ttggtgataaagaaaggtgcttctgattcgtcgtcccctggcagtcggtcctcgtctgtg
gtcggggaacccagtcaacagctgtctgtcttagagactgatggtccagacctccccaat
accagtctgaacatgccacctgaaccagtgatacaattaccccaggtatcaccgccagta
cagaaaccaggtaaccaaagtatggacgatactatggctatgttgaatgtacctaagatt
cccaatcgtattacgtctcgttcacctgacgagactgacctagatatttctcaggcagaa
gacagcatggagcgtagaccgactacaccaccccctccccacgctgcagacgtgacactg
acaaggcctggttactatacgatccccagtatggaggagcttggagatatggtggatgaa
cagggagagtgttttgtggacggattcaccatcggccgggagagatatggcagtatctac
ttccctggagtcttcagtgtcgctggactcaacttggatgaaattgtacacatccggagg
aaggaagtggttgtctaccctgacgatgataacaaaccttcagtcggcgacggtctgaac
aggaaggctgaaatcacactggactgtgtgtggccaatagacaagagtgaccgcactccc
atcaaaagcccagaacgcctggctgccatgaattatcaggagaagatagaagagatcaca
cacagaattggaggtagatttattgattaccgcccagagacaggttcctgggtgtttgag
gtgaaacactttactaaatatggcatggacgacagtgatgaagaggatttgtctaacttg
gcccagaaacagcagaaaacgggtcaacagaagccaggcctgtcacagcagctgcccatg
ggtcagggacagtcgtacatcccaccccagcccaccaacgggatagccccgcccccaaag
ttctcattagatatatcccagcaagcaatggatgaccgtgctgtgcccatgggggaggac
gacgatgtgccagacctctcccacaaagatgtcactgaggaatttgtgaacgagatgggt
gaggaggagttcgagggtcaggacgaagggccgagttcacacagactagcggccagtatg
ggagtcagcacccacagcatgcagatgatgaaggcgtccttctttggggacgaagaaaaa
actcctggaggagatggagacatggcctcagagaaacgcagtgatacaacagacaagcat
ggaccaagtctgtttagttctgcctacaaatccaagtttatgtctccggtcaaactgtcg
cagatgccacagaccacagacttcagagagcaacaaggaatgttcccaccacgtatccac
actcctgagcctatccgcccagccaagaaaaatttccaatacccacctgtagcggaacat
atgattctagccagtggaatgaaacctgaggatctcccacagaagatagttggctcccgt
gtccagagagaaattcctgagttctccaagtcagaaatgtatgggaagcagaatatgata
aaggatgcagcgttgttcatggggaggtcattccgtgtaggatggggaccaaactggacc
ctggcccattgtggaacaccaatcacgaaggagatcacagaagagaaagatgctgttagg
ttctcgctgttgtcaggaggtagaacaagaccggctgtggacagtacatatgaatggaag
gttaccttggagaaagtggatgtagctggctacttcagacaggaggacacaactgtactg
cacaaccacgaagaactactgatgatacagttggaccattcagagaagatgaagtctgat
tcctgtccccagtttgtccccagtccaggagttgatgccatccatcagtatgctgatagg
accaaactagacaaacaggacactgaaggccatccagattacgactcgctgagtcacatg
accactgtgtttgacctctgtgtgtcgttatggggacggttacctgccttccaagatcta
gatgatatagaggactgttatgattaccaccatgaccgacgagaagctctgtcccagtgg
ttaatgcacacatcaaaggaagttattaaaaaggagattagtgatgctaaatataaaaat
aagaaccaccttccagcagtattggcccacctcagtggtaaccagatagcagaggcatgt
tctctggcccaggcttcttctgaccaccgtctagccctgagtcttgcccaggccgctggc
agtcatacacctagacaactggtggagagcatgctcaacgagtggatagaactcgaggca
tgtgagtacctggaccccatgcgtcagaagatctactcgctgatggctggtcggctagta
tggcctacaccagactcaacagttaatacatgtgaatatatggattggaaacgggcatta
gctttacatctgtggttcctgtgtcctccatgctgtgctatccaacaagccctagaggag
tacgacaatggtttccttggggtgactacgtatggacgttactgtaatccaccactgcca
ccatacctagagcagaccactgacctgtccactatggggaccgatgagaacctggagata
caggacacttgttatcatctcttaaaactgtactctcaacggtcacataatctacaacca
cttctcaacccatcatcatctacgtcctctcacctcgactaccggctaagctggcatctc
caccaatccctggacgccctaggatacagacacttgtcctcctaccataggaactctata
cacatgaacttcgcctcccagctcgagtcccttggtctctgggagtgggccgtgttcgct
gtactccacatagaacagcaagcataccgagagtctgcagtacgagagctactactccga
cacatcagtctatctaaagaccacttctaccaagaaaaagagcagttccttagagaaaaa
ctagacgtccctgcagagtggattcatttcgccaaggcgatgagagcaaggtttgagaat
cgacctcatgatgaggcgtggcatctactcaagtctggacattggaatgatagtcaccga
gtggtactcaaacacatcgctgcagacgctatcatcaatgaaaaccatgactatcttaga
aagtttctggcagagttatctcctccaacacgttgtaacaaagttgttgattggccgagg
ggtggtcatgtgttcatggactacatcaatctgtgtcaggagctggagaatctgaagaga
gatctactagctagaagttatagtgaagatttacagacagatggggctagtagttatagt
gacgatttacagaaagacgggcatgtgtccaatgtacatgtggagggattacagtctgat
gtgatgtcgctgtgtagtcgtgtagaaagcttagtgtgtgccaattctaaagacaggctg
tgtcagtccgagatgtcaaagaaatgtgctcatctcctgagaacgttaataagtatacaa
gatccaaccggggaccacctactctcaagtttggtggctccacacattagtcgactacct
atgccgggggattatcgtctacaagaactcaatgaacttgtcaggaacaacatcatagaa
acaacagttacttga
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