Argopecten irradians (bay scallop): 138327603
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Entry
138327603 CDS
T10542
Name
(RefSeq) protocadherin beta-2-like
KO
K16498
protocadherin delta 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138327603
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138327603
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138327603
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138327603
Cell adhesion molecules [BR:
airr04515
]
Cadherins
Protocadherins
138327603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
138327603
NCBI-ProteinID:
XP_069129914
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Position
7:13399024..13444039
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AA seq
1037 aa
AA seq
DB search
MAGLTGVVLALALGMCVCTDIVYRVPEEQSGGRFIGNVALDSNLNLNLSESDHRTLRYSV
LASRTDDDHQYFTINQTTGNLYTSSLLDREAICPYTDQCKLDIEITAQSAITSYFKKLSI
VVYIEDVNDHYPVFQKTSQSLSIPESVLPGTSFTVDGAKDGDRSTNYGIQSYKLYPEDFP
FSVNFVKNLDGTSVVRIIVDGTLDRELRDLYELTLVAKDGGVPAKTADLAVHVHVTDVND
NAPVLSPKTYNVTVREDMPVGSTLVTLSATDLDSGRNGEVRYGLSPHQTEEIKNLFFINA
TSGELILINPLTYVRGNSYKIIVEVSDRGQQPMTTQTYVIVTVLDSGNNPPEIVLGLLTN
GVARISEFAPFGTTVAHVAVVDQDSGHNGIVMCSLDSTIFELQVLDINEYRVLVSQALDR
ERVARHSVTVTCQDSGTPMLVSNANFYVEVLDVNDNPPIFHMQTYSASIDENNKVGKEIL
QVTATDYDEGQNAEVKYRLLHSNDTIIQVDAHTGMIRANTVFDRERKSSFMFKVLAIDGG
SPPKSGTATVSLTVEDVNDNKPQFLENLFIFKRKENRQAGTIVGRLMAMDDDEGDSGRVV
FSLAEESPIFSTLPFVVYSDGIIKTTSELDRERKKFYDFKVMASDLGRPTLSSTANVKIF
IEDENDNSPNILFPSYTNNTVVISVGTPPGSVIGTVRAQDPDEGLNGEVSYSFDGDNLTS
YFRIFSETGDVILQKSVELFAGSEFSLNIIATDQGDPPRRSRQTLRIIVGTTLGSNKNIN
IIIVVSLVGVTLVLSTGIILVICIIRRIDTNKDRSRKPTSDNITANGLVGVPNNTYGTLN
KPVAEVISELERKRKEVTFAFSPDQQIPSDETYYDDKGQKPGGKQAYGEHVSQAFLKLQD
DNHSETSGETNTSDSGRGLSDDEVHGSRGGSYSKGRVVPKTKPNMEVNVYQNQNAFFPDG
REPISPISLPRFTAYPPYNSNNGRYQGDTGSGYAVHRPLQTFHFGPKSSSIEDDSGSTSG
IHTMDEDFTAHLKDSVI
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctgacgggcgtggtcctagccctagccctcgggatgtgtgtatgtacggat
atagtgtatagagttccagaggaacaatccgggggtaggttcattggaaatgtggccctg
gattcgaatctgaacttaaacttaagtgagagcgatcacaggacattacggtatagtgta
ttagcgagtaggacggacgatgaccatcagtatttcactattaaccaaactacgggcaac
ttatatacatcgtccctactggacagggaggccatttgcccgtatactgaccaatgtaaa
ctggacattgaaataacagcccaatcagcaattaccagctatttcaaaaaattgagtatt
gtggtgtatattgaagacgtaaatgatcattatccggtttttcagaaaacttcccaatcc
ctctccattccggagtcagtacttcctggaacttcctttactgtagatggcgctaaggac
ggcgatcgaagtaccaactatggtattcaaagttataaattgtaccccgaggatttccct
ttttctgtgaattttgtaaagaatttggacggaacgtccgttgtgcgcatcattgtcgac
ggcacgcttgacagagagttacgtgatctttacgaattgacgcttgttgccaaagatggt
ggtgtaccagctaaaacagcagatcttgccgtacatgtgcacgtgactgacgttaatgat
aacgcacctgtgctaagtccaaagacgtacaacgtcaccgtccgagaggacatgccggta
ggtagtaccttggtgaccttgtccgcgactgaccttgactctggacgtaacggagaagtt
agatatggactcagccctcaccagactgaggaaattaaaaatctatttttcatcaacgca
acttccggtgaacttatattgataaacccattgacctatgtccgtggaaattcatacaaa
atcatcgtagaggttagtgaccgtggtcagcagccgatgaccacgcagacatatgttatt
gttactgtacttgattccggaaataacccaccggaaattgttctggggcttttaacgaac
ggcgtggcgaggatttcggagtttgcacctttcggaacaactgtggcacacgttgcagta
gttgatcaggattctggacacaatggaatcgtcatgtgtagtttagatagtacaatattc
gaattacaggtactcgacataaacgagtacagagttctggtatctcaggcactggatcgc
gaacgtgtcgcgagacacagcgttacagtcacgtgccaggacagcggtacgcccatgctc
gtctctaacgccaatttttatgtggaggtactggacgttaacgataatcctccaatattt
catatgcagacatactctgctagtatcgacgagaacaacaaagtaggtaaggaaatactt
caggtaacagcgacagattacgacgaaggtcagaatgccgaggtcaaatatcgcttacta
cattcaaacgatactataattcaggtagacgctcatacgggtatgattcgtgccaacact
gtttttgatcgcgagcggaagtcctcattcatgtttaaagtgctcgccatcgatggagga
agtcctccaaaatcagggactgctactgtatcgctcaccgtggaagatgtcaacgacaat
aaaccacaatttctggagaatttgttcatatttaagcgaaaagaaaatcggcaggctggg
acgattgtaggtagactaatggctatggatgacgacgagggagacagtggaagggtcgtt
ttctcgttagccgaagaatcgcctatttttagcacacttccatttgtggtgtactcagac
ggtataataaaaactacctcagagttagaccgcgagagaaagaaattctacgactttaaa
gtaatggcgtccgaccttggccgccccaccttgagcagcacagcaaatgtgaaaatattc
atcgaggacgaaaatgacaatagtcccaatattctttttccaagttatacaaacaataca
gtagtaatatcggtgggaacacctcccggaagtgttatcggcacagtgcgcgcacaggat
ccggatgaagggttgaatggtgaagtttcttacagtttcgatggagataatcttacgtca
tacttcaggatattttccgagactggagatgtaattttgcagaaaagtgttgaattattc
gccggcagtgaattttctctaaacataattgcaacagatcaaggggaccccccacgaagg
tctcgacagacgttgagaattatcgttgggacaacgctaggttccaacaaaaacatcaat
ataattatcgtcgtttctttggtaggtgtgacgctagtactatcgactggaataatctta
gtgatatgtattattaggagaatcgatactaataaggatagatcgagaaaaccaacttct
gataacatcacggccaacggtctggtcggagtccctaacaacacgtacggcaccctaaat
aaaccggtagcggaagtgatatcagaactagaacggaaacggaaggaagtgacttttgct
ttcagccctgaccaacaaattccttctgatgaaacttattacgatgacaagggccagaaa
ccgggtggaaagcaagcttacggggagcacgtaagccaggcctttctgaagctacaggac
gacaatcacagcgaaacatcaggggagacaaacacgagcgacagtgggcgtggtctcagt
gatgacgaggttcatgggtcaaggggcgggtcatatagtaaaggcagagtcgtccctaaa
acaaaaccaaatatggaagtgaacgtctaccagaaccagaatgcatttttcccggatgga
cgtgagcctatatccccaatatctcttcctcgatttacggcctacccgccgtacaattcc
aataatggacgttaccaaggtgacaccggaagtggctacgctgtgcatagacctctacaa
acctttcattttggaccaaagtcttcttccattgaggacgatagtggttctacttccggt
atccacacaatggacgaagactttactgcacacctaaaagacagtgtgatataa
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