Argopecten irradians (bay scallop): 138327605
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Entry
138327605 CDS
T10542
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138327605
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138327605
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138327605
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138327605
Cell adhesion molecules [BR:
airr04515
]
Cadherins
Protocadherins
138327605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Fibulin_C
Cadherin_CELSR2_9th
Psg1
EndoS_helical
TM_ErbB1
DUF3377
Motif
Other DBs
NCBI-GeneID:
138327605
NCBI-ProteinID:
XP_069129920
LinkDB
All DBs
Position
7:complement(13677948..13706350)
Genome browser
AA seq
1129 aa
AA seq
DB search
MARDLCLIFLTVLICVNYVRTLSHTYTVTEDLVNPVILGIIAQDVNLKSQLSDSDDYAKL
RYSFLSQDHPHTFRFSIDEITSAITTNDKLDRDVICEFSPDSCELSLEVAAQSIIGVFFK
KIQVTVIIKDQNDHAPNFDHAGMVYLSISESSQIGREFTLDSAVDKDSKKYSVMNYSVVP
ESSPFTTKFTIDLVGNTDVKLKVTDELDREKNDHYQLQVIAEDGGSPPKTGVLNINVTIE
DENDNAPIFTLKTYNVSVKEDIAIGTSILEMTAVDADVGKNGEVIYMISTNQPPEIQALF
SMDLTSGRLEVAQPLMPAETYKLIVEAYDKGDQPSKAQVYVFIHVEDSGNNPPEIKINLL
YGGEQNVAKISEYANMGSPVAHVAVTDPDTGRNGIVTCSISNSEDYFQLQRLEVNEYKVI
VHKPLDRENQAQHDISVFCEDVGTPPLNSTKSFSAVVLDENDKYPQFSKPVYTVTFPENR
NNGEVIIQVTASDLDEGDNARLAFTLEGDSNGFFTIDDTGRIYSNIAFDRETSALYKFQV
IASDNGDPPLSSTATIELIISDENDNSPEFSEAVYTARVLENMPIDTSVLQVYATDLDAD
SNGYVTFTLAQNSQVPFIVLPDGVIHTTESLDREGVSQYVFYVVASDHGNPSRQSSVEVK
VNVDDRNDNTPIIIYPNISNDTVRVPYTARENTVIATIQAHDLDLGLNQKLLFSVRERND
SDLFNVLSITGEVIVAKQMQESHRGRYFLQIVVMDQGTPYLSSVTKLSIVVTDKNVTTPT
TPPSDEVNKYNVAIVVTVVVVTLVLSATILVTIFIIRRLDQQKQKFSQGLVLDGTKLQTE
KNLVKSSNLEGKATPNLYSPQGERVGVGMYSYATEPALDRMSLSSNNTLQPSHISYDHTD
SGSKDGTLQRCETPQNDVHQSDLHRLASIRLHQALVQSHDKAYANQHSELPYHRDTKKST
DDNSDTSGDTIPSDSGRGASDQEEVQSITQSHTSENFRRHPPPIRQNSRNTEKFHRNYPQ
TNHYMDMSGRKVNDLNSGIIPQRFQEELKHQLQPRYPYPRQQKLSFSSVGSELPTYGHFQ
QGLSVDETVESIATTGYDDDDTTTSGSYTIDNDDFPVELHFEKVHDVFV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggccagagatttgtgtttaatttttctgacagttttaatttgtgttaattatgtgagg
acattgtcccatacgtacaccgtcacagaggatttagtaaatccagtcattcttggaatt
attgcccaggatgtgaatttaaaatcccaactttcggattctgacgactatgccaagctc
cgttacagttttctctcccaggatcacccccacacatttcggttttctatagatgaaatc
actagtgctattacgaccaatgacaaattggacagggatgttatttgtgaattttcacct
gattcctgtgaattatctctagaagttgctgcacagtcaatcattggggttttcttcaaa
aaaatacaagtaaccgtgataatcaaggatcagaatgatcatgcaccgaattttgatcac
gcaggaatggtgtacctatccatatcggaatcgtcccagatcggccgcgagtttacccta
gacagtgctgttgacaaggacagtaagaaatactctgtcatgaattatagtgttgtccca
gagtcatcgccatttacaacaaagttcaccatagaccttgttggcaacactgatgtcaaa
ctcaaggtcacagatgaattggaccgcgaaaaaaatgaccactaccaacttcaggtaata
gctgaggatggaggctcaccaccaaaaactggtgtcctcaacattaatgttacgattgag
gatgaaaatgataatgctccaatcttcactttaaagacatataatgtcagtgtgaaggag
gacatcgctataggaaccagtatcttagagatgacggctgttgatgcagacgtgggaaaa
aacggtgaagttatctacatgatcagcaccaaccaaccaccggaaatccaggctctcttc
tccatggacctgacaagtgggcgactcgaggtagcacagcctctcatgcctgcggagacg
tacaaattaatcgtggaggcttacgataagggggaccagccatcaaaggcacaagtttat
gtctttatacatgtggaggactccggcaacaacccgccagaaattaagattaatctactc
tatggcggggaacaaaatgtcgccaaaatatctgagtacgctaatatgggatccccagtc
gctcatgtggcagtgacagaccccgacactggcaggaacgggattgtcacatgttctatc
tccaattctgaggattacttccagctgcaaaggttagaggtcaatgaatacaaggtcatt
gtccacaaacccctagatcgggaaaaccaagcccaacacgatatttcagtgttttgtgaa
gatgttggcactccccctttgaatagtacgaaatcgttctccgctgttgtcttggacgaa
aacgacaaatacccacaattctccaaaccagtttataccgtaaccttcccagaaaaccga
aacaacggagaggtcattatacaagtcacagccagtgaccttgacgaaggtgacaatgcc
agattggccttcaccttggaaggtgattccaatggattttttactattgatgatacagga
aggatatattccaatattgcatttgacagagaaacatctgccttgtacaaatttcaagta
attgcctcagacaacggagatccacctctatcttcgacagcaaccatcgagcttatcatc
agtgatgaaaatgataattcacctgaattctcagaagctgtttacacagctcgcgtcctt
gagaatatgccgattgacacatctgttctacaggtatatgctacagaccttgatgccgac
tccaatggatatgtgaccttcacccttgcccagaattcacaggtaccatttatcgtatta
ccagatggggtcattcacaccacggaaagtcttgatcgtgagggggtcagtcagtacgtt
ttctatgttgtcgccagtgaccatggtaacccatccagacaaagttcagtagaggtcaag
gtcaatgttgatgaccgcaatgataatacgccaatcatcatctatcccaatatctctaac
gacaccgtccgggtgccatatacagcacgggaaaacactgttattgccacaatacaagca
catgaccttgaccttggtctcaaccaaaagcttttgttttctgtcagggagagaaatgac
tccgacctttttaacgtacttagtattacaggagaagtaatcgtagccaaacagatgcaa
gagtctcatcgaggtagatatttccttcaaattgtcgtaatggaccaagggacaccatat
ctatcgtctgtcaccaaactcagcatcgtcgtcaccgacaaaaacgtcaccacaccaaca
acgccgccatcagacgaggtcaacaaatacaatgttgccattgtcgttactgttgttgtg
gtaactctcgtgttatcggcaaccattctggtgaccatcttcatcattcggcgtttggat
caacaaaaacagaaattttcgcaaggattagtattggatggcacaaaattacaaacagaa
aaaaacctagtaaaatcatcaaatcttgaagggaaagcgactccgaatctgtatagtccg
cagggagagcgagttggagttgggatgtatagctacgctactgaacctgccctcgataga
atgagcctctccagcaataatacattacagccctcccacatatcatacgaccatacagac
agtggaagtaaagatggtactcttcagagatgtgaaacacctcaaaacgacgttcatcag
tccgatcttcatcgcctagcctctatccgacttcaccaagcacttgtacagtcccatgac
aaagcctacgcaaatcaacattcagagttaccctaccatagagataccaagaaatccaca
gacgataacagtgatacgtcgggggataccatacccagcgacagtggacgaggggcaagt
gatcaggaggaggtgcagagcatcacacagtcacatacatcagaaaatttccgtcgccat
cctccaccaattcgtcagaattccagaaacacagaaaaattccatagaaattatccacag
acaaaccattatatggacatgtctggaagaaaagtgaacgatttaaattctggaatcatt
ccacaacgattccaagaggaattaaaacatcaattacagcctcgttatccgtatccacgt
caacaaaaactttccttcagcagtgtaggatcggaacttccgacctacggacattttcag
caaggactaagtgtggatgaaactgtagaaagtatcgctaccacgggttacgatgacgat
gatactacaacgtcgggaagttatacgatagataatgacgattttcctgtggaactccat
tttgaaaaagttcatgatgtgtttgtgtga
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