Argopecten irradians (bay scallop): 138327819
Help
Entry
138327819 CDS
T10542
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
138327819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138327819
Transporters [BR:
airr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
138327819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Tweety
Motif
Other DBs
NCBI-GeneID:
138327819
NCBI-ProteinID:
XP_069130315
LinkDB
All DBs
Position
7:20981959..21038889
Genome browser
AA seq
673 aa
AA seq
DB search
MSKSTSLDLNDDNIATSAFLSDKEKALDVASSNDTSSCSDSMATGDETSRGNWSGRLDFF
LSCVGYAVGLGNIWRFPYLCYKSGGGAFMIPYVIFLVLCGIPMVFLEVTFGQFASLSPVS
IWRICPLFKGVGYGMVIVSGIVCVYYNIIITWTLYYLYHSLRLVLPWSLCHNWWNTEHCY
LRTNTNNTVSNINGSSTYNLTMVTELLNSSSTYNLTNVETVTASRGNTSSVLKKTASEEF
WQRGVLQLSKGIEDMGDLRWDLLICLFIAWVVVFLCLCKGIKSSGKVVYVTATFPYLVLL
ILLIRGVTLPGAGAGIAFYLVPDWEKLATFQVWGDAAVQIFYSVGMAWGGLITMASYNKF
HNNVYRDAMVVPLINCGTSVFAGLVIFSVLGFMAHETGVDIKNVVTQGPGLAFVAYPEAI
AKLPISPLWSVLFFLMLFSVGLDTQFGMFETMSSAFIDEFPELLKNKKALFTAFMCFLEF
LLGIPCVMQGGVYVLQIMDWYCSTFSLMILSLTECIVIGWIYGADRFYKDLEMMIGYQPC
SWWKICWCFITPVLILFIWLFSVTQLSPVTYGTYQYPQWAIVLGWILGMTSLVPIPVCAI
IAILKEKGSLVSRVKKLIKPADNFGPAMLKYQEKYLESMEKRESILPTINVRCRLKKKSK
EIEASSEPLTYIS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatctacttcactggatttaaatgatgataacatcgcaacatctgcgtttctt
tccgataaggagaaagcgcttgatgttgcctcttcaaatgacaccagcagctgtagtgat
tccatggcgaccggagatgaaacgtcccgtgggaactggtctggacggttggattttttc
ttgtcctgtgtgggatatgctgttggacttggaaatatctggcggtttccatatctatgc
tacaaaagtggcggaggtgctttcatgataccctacgttatatttctggtgctgtgtggc
attccaatggttttcctggaagtgacctttggtcagttcgccagtcttagtcctgtgtca
atatggaggatctgtccattgtttaaaggtgtgggttatggaatggtgattgtatcaggt
attgtctgtgtatactataacatcattattacctggactctgtattacctgtatcactcc
ctacgattggtcttgccctggagtttgtgtcacaactggtggaacacggaacattgttac
ctaagaacgaataccaacaacactgtatccaacattaatggttcatctacatacaacctc
accatggtaacggaacttctcaacagttcatcaacttacaatcttaccaatgtcgaaacc
gttacagcatccagaggaaatacatctagtgtattgaagaaaacagccagtgaagagttt
tggcaacgtggggtcctacagctgtctaagggtatagaggatatgggcgatctgcggtgg
gaccttctcatctgtctgttcatcgcctgggtggtggtgttcctctgtttatgtaaaggc
attaagtcatctggcaaggttgtatatgtgacggccaccttcccgtaccttgtgttgctg
attctactgatccgtggagtgacattaccgggagcaggtgctggaattgcattctacctg
gtacctgactgggaaaaactggccacatttcaggtttggggagatgcagctgtccagata
ttttattctgtgggtatggcttggggaggccttatcactatggcgagttacaacaaattc
cacaataacgtgtacagagatgctatggttgtccctttgatcaactgtggtacgagtgtg
tttgctggccttgttatcttctcagtcttaggattcatggcacatgaaactggagtggac
atcaaaaacgtcgtcacccaaggccctggactggcgtttgtagcgtatcctgaggctatt
gctaagttaccaatctccccgctgtggtctgtactgttcttcctgatgttgttcagcgtt
ggattagacacacagtttggaatgtttgaaaccatgagcagtgctttcatagacgagttt
ccagaactgctaaaaaacaagaaggctctcttcacggcattcatgtgtttcttggagttc
ctgctcgggattccctgtgtcatgcagggaggtgtgtacgtgctacagatcatggactgg
tattgctccacattttccctgatgatcctctccctaacagagtgtatcgttattggctgg
atctatggtgcggaccgtttctataaggacctggaaatgatgataggttatcagccctgc
tcctggtggaagatctgctggtgtttcatcacccccgtactaattctgtttatctggctg
ttcagtgtgacccagctgagccctgtgacgtacggtacctatcagtatccccagtgggcc
attgtactcggctggatcctgggaatgacctcccttgttcctatcccagtctgtgctatc
attgctattctaaaagagaaaggatctctcgtgtcgagagtgaaaaaactgataaagcct
gcagacaactttggacccgccatgttgaagtaccaagaaaaatatctggaatcaatggag
aaaagggagtccattttaccaaccatcaatgtgagatgcaggctaaagaagaaatcaaaa
gaaatcgaagcttcatcagaacccttgacttatatcagttaa
DBGET
integrated database retrieval system
