Argopecten irradians (bay scallop): 138327829
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Entry
138327829 CDS
T10542
Name
(RefSeq) protocadherin gamma-A4-like
KO
K16498
protocadherin delta 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138327829
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138327829
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138327829
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138327829
Cell adhesion molecules [BR:
airr04515
]
Cadherins
Protocadherins
138327829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Inhibitor_I10
Motif
Other DBs
NCBI-GeneID:
138327829
NCBI-ProteinID:
XP_069130335
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All DBs
Position
7:complement(21368898..21408998)
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AA seq
1129 aa
AA seq
DB search
MIVHVILVSAVIAAVLGQNADFKYTLLEEQANGTVVGNIASDVRPVIDVTDSVFNQLRYQ
LLTEGNVYAKLFSLNEQSGSLAATKIDRENVCPDEKICDLRLSIAIFKDDPNNPDLIKLL
LIDVTIQDINDHPPLFSPSEVVVSVSETVNIGYIIPIDEATDQDSGSNNSVQTYEFVTVQ
DVFRLKYPSDDNDVPTVEIEVNQLLNYEMVKYYQLEIVAKDGGSPQKSGSVTIHINVLDE
NDNAPEFTKPEYKATTVENRGNGVVVTQVTARDLDSGDKGTVSYMFNPSSIPSVFGINDT
TGEIFVTGLIDYEAEQSFSFFVQAVDGGVQPRSSSALVVITVTDVNDNAPQVNINLPPGG
EVILEDAEPGRYIANVAVSDPDSGAFGNVTCQLNSDYFKMDTLYINMYKVTLKQKLDRED
RAVHNVSVVCSDGGSPNLVSITSFLIHVGDINDNSPVFKHTQYNASIYENNQVGAPVTIV
TATDSDEGENSRVTYSLSRNEDDFFSINVDSGVISANVVFDRETNSHQEIEVVATDNNAV
TKYSATATVVVTILDINDNQPSFSQEVYTFTVQENQAPGTVIGQIFAYDKDSDANGNILF
PPTHPYTSIFEIIQNTGQIQTKVVLDRETQGLYDFHVTAQDNGQPSLQTTTNIVIIVEDV
NDNVPNVTFPTSQNNTVTIMPGKSRGAIVTKVMASDPDQGVNSELSYVVMKGASSLFYIN
NKTGVISLGQDLTEGHIGTYAILLAVQDAGTPSQTTWSDLVIIVSNPNANKNVIIVIAVI
SVTVTLSLGMIIMICLIRRQDAKSFDKGDGKLTDHKKKFVMDWLHCLSTSTRDVHKLGND
RSDVQLHRPTDLKPICSNDSTASEGSQDCKNESKENIGRTDEDEGFVETPGGTLSHDSGR
GDSVRTRHDSSMSQQELMASQDSRMFYSLPRYPTGSGDTLNDTRFSTSTSEGVSIPESWQ
HRPVPPRPTYNRNISLDEHMLRQKGQTMSSFREDARFSSTDSAIVPVSRNYHQNNPVALG
LSYDSHTLHRHLQGQYPRPSNHSSTKTAQKRTLSPISATPEPSEGGFSSSSHSSQPHSPS
HKSYSGVHFFKSGSQSSGQSQTGASSFRQDSIQLECDIENRLNREDCIV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccacgtgatactagtgagtgccgtcattgctgcggtgttgggccaaaatgca
gactttaaatacaccctgttggaggaacaagcaaatggaactgtcgtcggtaacattgca
tctgatgtccggccagttattgatgtgacggactcagtatttaatcagcttcggtatcaa
ctcctcacagaaggaaacgtttatgccaaattgttctctctcaacgaacagagtggtagt
ttggcagcaacaaagattgaccgagagaatgtatgtccagatgagaaaatttgtgatctt
cgtttgtctattgctatttttaaagatgaccccaataatccagatttaattaaattactt
cttattgatgttacgatccaagacataaacgatcacccgccactcttctctccgtccgag
gtagtcgtctccgtgtcggaaactgtcaacattggctacattatacctatcgatgaggcg
acagaccaggacagtgggtccaacaactcggtacaaacatatgagtttgtaactgttcag
gatgtgttccggctaaaatatccttcagatgataacgacgttccgactgtagaaattgag
gtcaaccaacttttgaattatgaaatggttaagtattaccagttggagatagtagctaaa
gatggtggatcaccgcagaagagcggcagtgttacaatccacatcaacgtactggacgag
aacgacaacgccccggagtttaccaagcctgaatacaaggctacaacagtggagaaccga
ggcaatggtgtggtggttacccaggtaacggcccgggacttagactcgggtgacaagggc
actgtgtcgtacatgtttaatccaagctccatacccagtgtgttcggtattaatgacacg
actggggagatattcgttactggactgattgattacgaggctgagcagagtttctccttt
ttcgttcaagctgtggacggtggagtccagccgagatcctcatccgcgttggtggtcatc
actgtcacagatgtcaacgataacgcaccgcaggtcaatatcaacctgccccctggtggt
gaggtgattttggaggatgcagaacctggacgttacattgccaatgtagctgtgtctgat
cctgacagtggggcgtttggtaatgtgacgtgtcaactaaacagtgattactttaagatg
gacacgttgtatatcaacatgtacaaggtgactttaaaacagaagctagaccgagaggac
cgggccgtacacaatgtaagcgtggtctgttctgacggaggatcacccaaccttgtctcc
atcacaagtttcctcattcatgttggtgacatcaacgacaactcacctgtcttcaaacac
acacagtacaacgcatcaatttacgaaaataatcaggtgggtgctccagtcaccatagta
acagccacggattcagatgaaggagagaacagcagagtaacgtacagtctgtctaggaat
gaagatgactttttctctatcaatgttgattctggagtgatcagtgctaatgttgtgttt
gatagagagacaaattcccaccaggagatagaggtagtagcaacagacaataacgctgta
acaaagtacagcgccacggcaaccgttgtggtcaccatccttgatatcaacgacaaccag
ccatcattctcacaggaagtctacacattcactgtccaggagaaccaagctcctggcact
gtgattggtcaaatatttgcctacgataaagacagtgatgctaacggaaacatcctcttc
cctccaactcacccctacactagtatctttgagattattcaaaacacaggacagattcag
acaaaagtcgtgctcgaccgtgagactcagggactctacgacttccacgtgacagcacag
gacaatggccagccgtccctacagaccaccactaacatcgtgatcattgtagaggatgtt
aacgacaatgttccaaacgtaacattccctaccagtcagaacaacaccgtcactatcatg
cctggtaaatcccggggtgccatagttaccaaggtaatggcttcagacccagaccaaggt
gtaaattcggaactttcctatgtagtaatgaagggtgcgagtagtttgttctacatcaac
aacaagactggtgtgatcagcctgggacaggatctcactgagggccatattgggacatat
gccatactgctggctgtccaggacgcaggcacacccagtcagacgacctggtccgacctg
gtgatcattgtcagtaatcctaacgccaataagaatgttataatcgtgatcgctgtgata
tccgtcactgtaactctgtctcttggtatgatcatcatgatttgtctcattcggcgtcag
gatgctaaatcgtttgacaaaggggatggcaaattgacagaccataaaaagaagtttgta
atggactggctacattgtctgtcgacttccacaagagacgttcataaacttggtaacgac
aggtctgatgtgcagctccatcgtcccaccgatctgaaaccgatttgttccaatgacagc
acagcctcagagggcagtcaggattgtaagaatgaatccaaagagaatattgggcgaacc
gatgaagacgagggattcgtggagacaccaggtggtaccctgtcacatgacagcggccgt
ggcgacagtgtccgtacacgtcacgacagctccatgagccaacaggaactgatggcaagt
caagattccagaatgttttactcgttgccacggtacccaacaggaagtggtgatacatta
aatgatacacgattctctacatccacatcagaaggtgtttcaataccagagagctggcaa
catcgaccggttcctccacgacccacgtacaacagaaacattagtctggacgaacatatg
ttacgacaaaaaggacagacaatgtctagttttcgtgaggatgccagattttcttccaca
gactctgccatagtgccagtgagtaggaactatcaccagaacaatcctgtcgcgcttgga
ttgtcgtacgatagccataccttacacagacatttacaggggcaatatccccgtccttca
aaccattcttccacaaaaacggctcagaaacgaacactttctccgataagtgcgaccccg
gagccgagcgagggtggcttctcgtcctcatcccactcatcgcaacctcactcaccgtct
cataagtcatattctggtgtccacttcttcaagtccggctcacagtccagtggtcagtcc
caaacaggggcgtccagttttcgtcaggactcgatacagctggagtgtgatatagagaat
cgtctcaacagagaggactgtattgtataa
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