Argopecten irradians (bay scallop): 138328128
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Entry
138328128 CDS
T10542
Name
(RefSeq) protocadherin beta-14-like
KO
K16498
protocadherin delta 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138328128
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138328128
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138328128
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138328128
Cell adhesion molecules [BR:
airr04515
]
Cadherins
Protocadherins
138328128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
CytochromB561_N
SLC25_like
He_PIG
TMEM154
Ig_CFAP65_4th
SecDF_P1_head
BPD_transp_1
Motif
Other DBs
NCBI-GeneID:
138328128
NCBI-ProteinID:
XP_069130873
LinkDB
All DBs
Position
7:complement(31210677..31228929)
Genome browser
AA seq
1041 aa
AA seq
DB search
MDVVRFLSLDLLLVCILFTCIAPGIQGKDVAYSLLEEEQANAYLGNVAADADLASEAADP
ADLNSMKYSFLTQGNTIVSLFHINERQSSLYTATKLDREELCEFEEECILELEVIARSTS
GSLYKKIKVSITLLDINDNSPSFSVPSITRDISEGSLTGFYIPIEAAKDTDTGNFSIQDY
TLEPPTSPFTVGYQEFVDGSYSVRIVLNGQLDRETTSTYKVNVIARDGGDPPKTGALEVT
INVLDINDNRPKFSTQMYNVTVNEDVAVNTTITTVFADDPDQDDNGRVTYKLSPNQAEKI
PTLFAISESTGDVIIIGSLIYEPGKSYTIIVEASDNAMQPLISQAKVFIHVLDVHNNPPE
ISIDPLSNTDDSEILENALLDTAVAHVTIFDPDTGKNGIVNCSVINSDKFTLQKFAVHEY
KVVLYQPLNREIKDRYEVTVYCHDTGTPQLNASSTFVVHVMDINDNTPKFTQQQYFLSVR
EDTSVTVSVMQVAANDFDNGKNAEVEFSLDAEGQKYFAIAETSGVISVNSDLDRETVTQI
TFTVYAADKGSPSLTGSAQVKVYVTDVNDNKPEFIENTFEYNLEENNHVNVSIGVLVAND
KDDGNNSRITYFLHPNYNAGIPFSILPNGSVMATQVIDREAKSRYDFTVIAEDMGTPSLR
NSAHVTVFVLDVNDNNPEFVFPNAHNNTVVISYQTPVNTIVSTVETRDIDEGMNSKVTYF
MKDKNFSHIFKLNNLSGRIVLDKGLTVADARKYTFGIIAQDKGTPPRINEIAMSIVVTTQ
GLGEDVPQPEEHRQYFLIAVAISCVTAVIAIVIILTICLIKRADRIKQKYSESKDNSDGP
LGRQETRKKVSFSIDDRVMTTMPGGRANVPESHLYPEIPTGSIQVSLKSPDRGHESDSGQ
GSLDSSDRRHHQLTSLQLRHALMTSPSGSKNRSAMPHVSPPLSGLITHQDMDNHSDLSGE
ANTSDSGRGGSEDEINTSCILSYSGDFDHLAHSPRGKHMSRSSSKNAGKREDLFPLPEND
YGQLNHMKPTLAPISFGDRFF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtacgatttctgagtttggatttactcttagtttgtattttgttcacgtgc
attgccccggggatacaggggaaggatgtggcttattctttattagaagaggaacaagcg
aacgcctatctaggaaatgttgctgcagatgctgatcttgcctctgaggctgcagatcca
gccgacctcaattccatgaaatacagcttcttaacacaaggtaatacaatagtttcactg
tttcacatcaatgagagacagagctctttgtacaccgccacaaaactagacagagaagag
ttatgtgagttcgaagaggaatgtattttagagttagaagtgatcgctaggtctacatct
ggaagtttatacaagaaaatcaaagtatctatcactcttttggatattaacgacaattct
ccatccttttctgtgccctcaataacacgtgacatttcggaggggtcccttacggggttt
tacatccccatagaggctgccaaggatactgacacaggtaacttctcgatccaggattac
acattagaaccccccacgtccccctttactgttgggtaccaagagttcgttgatgggagt
tacagcgtcagaattgtcctgaacggtcaactcgacagagaaaccactagtacttacaag
gtaaacgttatagctcgagatgggggagatccacctaaaactggtgctctggaggtcacc
atcaatgttttggacatcaacgataatcgcccaaaattcagtacccagatgtacaatgtc
actgtgaacgaggatgttgctgttaacactactattacaactgttttcgctgatgacccc
gaccaggatgacaacgggagagttacctacaagctgagccctaatcaggctgagaagatc
cctaccttatttgccatcagtgagtccacaggagatgtgatcataataggatccctcatc
tacgaaccaggcaagagctatacgatcattgtggaagcatcagacaatgccatgcagcct
ttgatttcacaggctaaagtgttcatccatgtcttggacgtgcacaataacccaccagag
atcagtatagatcctctctcgaacaccgacgattctgaaatcctggagaatgcccttctg
gatacagcagttgcccatgtcacaatttttgatcctgacactggtaagaacggcatcgtg
aactgctctgtgatcaacagtgataagttcacgctgcagaagttcgccgtccacgagtac
aaagtggtcctctaccagcctctgaaccgagagattaaagacagatacgaagttacagtg
tactgccatgatacgggaacaccacaactgaacgcttcttctacgtttgttgttcacgtg
atggacattaacgacaacacaccaaagtttacacagcagcagtacttcctcagcgtccgg
gaggatacgtctgttacagttagtgtgatgcaggttgctgccaatgatttcgataacggc
aaaaatgctgaagtcgagttttctttggatgcagaaggtcagaagtatttcgctattgca
gaaacctctggagttatatctgtgaattctgatttggatcgagaaactgtaacccagatt
acgttcactgtgtacgctgctgacaaaggctcgccaagtttgaccggaagtgcccaagta
aaggtgtatgtcacggacgttaacgacaacaaacctgagtttattgaaaatacatttgag
tacaacctggaggagaataaccatgtcaatgtcagcattggtgtattggtagcgaacgac
aaagacgacgggaacaacagtaggataacatattttctccatcctaattataacgcggga
atcccattctccatcttgccaaatggaagtgtcatggcaactcaggtgatcgaccgcgag
gcaaaatcgaggtatgattttaccgtaattgctgaggatatgggaaccccatccctccgt
aactcagcgcacgtgaccgtgttcgttttagatgtcaatgacaacaatcctgagtttgtc
ttccctaatgctcacaataacacagttgtcatctcgtaccaaacacctgtcaatactata
gtgtccaccgtggaaacaagggatattgatgagggcatgaattccaaggtcacttatttt
atgaaggataaaaacttctcccacatttttaagttgaataatctttcgggacgtattgtt
ttggataaaggtttgactgttgctgatgccaggaaatatacattcggaatcattgcacag
gataaggggacccctccaaggattaacgagatagcaatgtctatcgttgtcaccacccag
ggattaggagaggatgtcccacaaccggaagagcatcgtcaatatttccttatcgcagtt
gccatttcctgtgtgacggctgttattgccatcgtcatcattttgaccatttgtcttatc
aaaagagctgatagaataaagcagaaatattccgagtctaaagacaattcggatggacct
ctaggacgacaggaaacgcggaagaaggtcagcttcagtatcgacgatcgggtcatgacg
acaatgcccgggggccgggccaatgttccagagagtcacctgtatcctgaaatacccacg
ggctccatccaggtgtccttgaaaagtcctgaccgtggtcacgagagcgatagtggacag
ggaagtctggacagtagcgataggagacatcaccaactgaccagcctccagcttcgtcat
gctctgatgacctcgcccagcggctccaagaatcggtcagccatgccacatgtgtcgcct
cccttgtctggactcattactcaccaggacatggataaccatagcgacctgtccggagag
gccaataccagcgatagtgggcgtggcggcagcgaggatgaaatcaacaccagctgtatt
ctatcatactcgggagacttcgatcacttggcccatagtcctagaggaaaacatatgtcc
agaagcagttccaaaaatgctggcaagcgtgaggacttgtttccgcttccggaaaacgat
tatggacaattaaatcatatgaagccaacgttagccccgatatcatttggagatcgattt
ttttaa
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