Argopecten irradians (bay scallop): 138328129
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Entry
138328129 CDS
T10542
Name
(RefSeq) protocadherin beta-15-like isoform X1
KO
K16498
protocadherin delta 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03273
Virion - Lassa virus and SFTS virus
airr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138328129
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138328129
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
airr01009
]
138328129
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
airr04515
]
138328129
Protein phosphatases and associated proteins [BR:
airr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138328129
Cell adhesion molecules [BR:
airr04515
]
Cadherins
Protocadherins
138328129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
F59B103_C
Motif
Other DBs
NCBI-GeneID:
138328129
NCBI-ProteinID:
XP_069130874
LinkDB
All DBs
Position
7:30984374..31001414
Genome browser
AA seq
956 aa
AA seq
DB search
MDRRPLLVLMLVFAVTSCFEILYNMEEEQDTDFYLGKVATDAQLITGNGTNIELRYSLLT
TGNPDALLFHINERTSALYTASVLDRDALCPFTSSECILKLDVTAISPINDFFEKIKVHV
RLLDINDNAPTFPESKIDMEISENSGQGKSFPLDGATDEDSGQNAVQSYRIETSDVPFIL
ETTDFADGRALLRLVVDQELDRETENKYIVKIVAIDGGINPKTGTVTLNITITDANDNPP
KFPKAVFNLTIPEDIVPNSVILNFNATDPDENENGRVLYRLSSHQSDEIRRLFKVGPTTG
ELSVISSLIDERTTSYRIIVEASDNATQPLISQAQVYVTVLDTHNNAPKITINVLSQSYY
AEVSESAPTGTVLAIITVKDPDNGQNGVITCSIDDINFRLVADGPNEYNFVLNRVLDREM
IEWHTVEIDCRDYGTPPLNTSSRILVRVLDINDNPPQFTKAIYYVNVPENDSPYSGILQV
QATDSDTIVPSSYNYSLLLPEEYNNFFTINANSGVITAVVSLDREATPRITFQVFAEDGG
SPSLTGSALVEVNVIDMNDNFPKFTPESFEFVIPENQLPNVSVGKLVAQDSDARDNGEVS
FSLTSSADIYLPFDVLRNGTILGTRTLDRELIGQYNFTVIAYDHGSPPLTSTAEVKVTIQ
DINDNIPIITFPSIGGDLLYLPSDTLPNTIIATIKAYDNDDGDNAKLSYFSQNSNKTKLF
TVNKFTGQMSLSRHVAQSDIGTYDLSILVQDGGNPPKLSYRTLTIIITDSSRNLSEDPST
KIKYFAIAIAISCVTIVLSILIILAICLIRRKDRQRDSKYPESVSTNSTIDTAPEHNNPD
IKVNGIYTREAMQKTLTDTLPRNNDTFPRADNSPRALATLERVKKAKSPSRTQPEIISDS
VAIWDWSEHHEGPVDGMGGIIRQTRPSQPAYPSHIPQSFITLYPDQSTFEQTAEVV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaggcctctcctggtactgatgcttgtcttcgctgtgacgtcatgttttgag
attctgtataacatggaggaagaacaagacacagatttttacctggggaaagtggccacg
gacgcacagttaattacaggtaacggaacgaatattgaactacgatacagccttcttacc
acaggtaatcctgatgccttactttttcatattaacgaaagaacatccgctctatataca
gcttccgtccttgatcgtgacgccctttgcccttttacgtcatcagaatgtatcctaaaa
cttgatgtcaccgccatttcacccatcaatgatttctttgagaagataaaagtgcatgta
agactactcgatataaatgacaatgcgccaacatttccagaaagtaagattgatatggaa
atatctgagaattccggacagggaaagtcctttccgctagatggggctacggatgaggac
agtggccagaatgctgtccaaagttacaggatagaaacaagcgacgttccgtttatattg
gagacaactgacttcgcggacggtagagctctacttagattagttgtagaccaagaacta
gacagagaaactgaaaataaatatattgtaaagatcgtagcgattgatggagggattaac
cccaaaacgggtacggtgaccttaaacatcaccattactgatgccaacgataacccgccg
aagtttccgaaagcagttttcaatctgactataccggaggatatcgtaccaaacagtgta
attttaaatttcaatgcgacagatccagacgagaatgaaaatggccgggtattataccgg
cttagttcccatcaatcggacgagatcagaaggctcttcaaagtcggtccgacaacaggg
gagttaagtgttatcagttcgcttattgacgagcgaactacttcctatagaattattgta
gaagcttcagataacgccactcagccactaatctcacaggcgcaagtctacgtcacagtc
ttagacacacataacaacgcgccaaaaatcactatcaacgttctctctcaaagttactac
gcagaagtttcagagtcggcccccactggaaccgtcttagccatcatcacggtaaaggac
cccgataatggacaaaatggcgtcatcacgtgctccatagatgacattaacttccggtta
gttgctgatgggccaaatgaatataattttgtattgaaccgagttttggaccgcgagatg
attgaatggcataccgttgagatagattgtcgtgattacggtacacccccattgaatacg
agttctaggatcttggttcgagtcctggatatcaacgataacccaccacagttcacaaaa
gcaatttattacgtcaatgtgccagaaaacgactctccttatagcggtatattacaagtg
caagcgacagatagtgacaccattgtaccaagtagttataattattctctactgttacca
gaggaatataataactttttcacaataaacgcaaatagcggtgtgataacggccgtcgtt
tctttagacagggaggcaaccccccgtataacgttccaggtgtttgccgaggacggtggc
tcgccatctttgacaggtagcgccctggtggaggttaacgttattgacatgaacgataat
tttccaaaattcacaccggagtcattcgagttcgttataccggaaaatcagttaccgaat
gtgtcagtaggtaaacttgttgcacaagacagcgacgcaagggacaatggcgaggtgtca
ttttcacttacctcgagtgctgacatttatttacctttcgatgtgttaagaaatggtact
atcctggggactcggacactggacagagagctgattggtcagtataacttcacggtgatt
gcttatgaccacgggtcaccgcccttgactagcactgccgaggtcaaggtcaccatacaa
gacattaacgataatataccaataattaccttccccagtattggcggggacctgttatat
ttgccttctgacactctccccaataccatcattgccaccattaaagcttatgacaacgat
gatggtgataatgctaaactttcatatttttcacaaaacagcaacaaaacgaaacttttt
actgtaaacaagttcacaggtcaaatgtcattgtctcgtcatgtagcacaatctgatatc
ggtacttacgacctatcgattctagtccaagatggtggaaatcccccgaagttaagttat
cgtacgttgacaattataatcacggattcgagtagaaatttatccgaagatccttcaaca
aagatcaagtatttcgctatagctattgccatttcatgtgtgaccatagttctttcaatt
ctcattatccttgcgatttgtctgatccgaaggaaagatagacagcgggactctaaatac
ccagaaagtgtttctacaaactcaacaatagacacggcaccggagcataataatccggat
atcaaggtcaatgggatttacacaagggaggcaatgcaaaagacgctcacagacaccctc
ccgcgtaataatgacaccttcccaagggcggacaactccccgcgagcactagctacgctg
gaacgtgtgaagaaagcgaaatctccgagccggacccagccggaaatcatatcggattcc
gtggcgatatgggattggagtgaacaccacgagggtccggttgatggtatgggaggaatc
attcgtcagacccgcccctcccagcctgcttacccctcccacataccccagtcattcatc
actctctaccctgaccaatcaaccttcgaacagacggccgaggttgtgtga
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