Argopecten irradians (bay scallop): 138329226
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Entry
138329226 CDS
T10542
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138329226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138329226
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138329226
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
138329226
NCBI-ProteinID:
XP_069132153
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Position
8:6907751..6923548
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AA seq
603 aa
AA seq
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MLLVIYLMIRLLPFQYFCSRILHTTCLQSIGIDETESMIPSMFGGGQQPGGTGSFNFGAA
TPATQASTGSGFKFGAPTAASTPAVGGFNFGGQTSAAATTPATGFNFGGQTSAAATTPAT
GFNFGTATTQASTAAPTAAPAGLGTGFNFNTPAASTPATGIAQPVAAATPFNFASSISST
TSATAGTPGLLSTPSTQSTGLKLGGSTTAPGLTLGGSTAASGLTLGSSTPASTGLSLGGS
TPAPGQTLGGNTAASTGLTLGGSTAAPGLTLGGSTPASTGLTLGGNTAAPGLNLGGSTAP
STGLTLGGSAPSTSLALGGSTAAPGLTLGGSSAASTGLTLGTGTPASTGLTLGASTTANT
GLKLPSTAATTTTASTGLSLQGTLAPKSTAVGFTAPTAATATTAPQKQITYQQLEDNINK
WMSELDKQEKDFLEQATQVNGWDRLLIDNGEKISALNSDMERVKIDQQKLDHELDFIKSQ
QQELSDLLTPLEKSLEQQPNINFQQHADLEREHTYQLAENVDAQLKRMVQDLKEIIDHLN
MTNSSQDNSDPTQQITKILNSHMDSLQWIDQNTALLGRKVDDISKQMEMQRKEQERNFRL
VYN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgtgatatatttaatgataaggttgctgccgtttcaatatttctgctcaagg
atcctacacaccacatgtttacagtccattggcattgatgaaactgaaagtatgattccc
agtatgtttggcggtggacagcagccaggaggaactggtagttttaactttggtgcggct
acaccagctactcaagcttctacaggtagtgggtttaagtttggagcccctactgcagcc
tctactcctgctgtgggaggatttaactttggtggtcagaccagtgctgctgctaccact
ccagcgacaggctttaactttggtggtcagaccagtgctgctgccactactccagcgaca
gggtttaactttggtacagcaaccactcaggctagcactgctgcacccacagcagcccca
gccggccttggaacaggattcaactttaacacccctgccgcttcaacaccagctacaggg
atagcccagccagtggctgctgctacaccattcaacttcgctagctccatcagctctaca
acttctgctacagcaggtacacccggacttctaagtacaccatcaactcagtcaacagga
cttaaactaggtggcagtactacagctccaggtctgacactaggtggcagcactgcggca
tctggactgacactaggtagcagtactccagcttcaactggactgtcacttggtggcagc
actccagctcctggtcaaacactaggtggcaacactgctgcttcaactggtctgacatta
ggtggcagcactgcggcacctggcctgacactaggtggcagcaccccagcttcaactgga
ctgacactaggcggcaacacagcagctccaggtttgaacctaggtggcagcacagctcct
tcaactggtctaacactaggtggcagcgctccttcaactagtcttgcactaggtggcagc
actgctgcaccaggactgacactaggtggcagctctgctgcatctacaggacttacttta
gggacaggcacacctgcatctactggccttacacttggagcaagtacaacagcaaataca
ggactgaaattaccatcaacagcagctacaacaaccacagcttctacaggcttatctctg
caggggactctggccccaaagtctacagcagtaggcttcacggctcccacagcagccaca
gctactacagcacctcagaaacagatcacataccagcagttagaggacaacatcaacaaa
tggatgtcagaattagacaaacaggagaaggacttcctagagcaagctacacaagtcaac
ggctgggaccgtcttctcatagacaatggagaaaagatttctgctttgaacagtgatatg
gagcgggtgaagatagaccaacaaaaactcgaccacgagcttgactttatcaaatctcaa
caacaagaattatctgaccttttgacccctctagaaaaatctctggaacaacaaccgaat
attaactttcagcagcatgctgatctggagcgcgagcacacgtaccagttagcagagaat
gttgatgcccagctgaagaggatggtccaggacttaaaagagattatagatcaccttaat
atgactaactccagtcaggacaattcagaccctacacaacagatcacaaagatcctaaac
tcacacatggactccttacaatggattgatcagaacacagctttattgggaagaaaagtg
gacgacatttccaaacagatggagatgcaaaggaaagaacaagaacgaaattttagattg
gtttacaactga
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