Argopecten irradians (bay scallop): 138329463
Help
Entry
138329463 CDS
T10542
Name
(RefSeq) sodium-dependent proline transporter-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
138329463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
airr02000
]
138329463
Transporters [BR:
airr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
138329463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
138329463
NCBI-ProteinID:
XP_069132581
LinkDB
All DBs
Position
8:complement(15075450..15105818)
Genome browser
AA seq
725 aa
AA seq
DB search
MSEYHKVRTASDGQIVTNINPNNYKDGKVSKRSIPDIAAEIPLIPEAELEQRGTEKYQSD
SDPSANKKWGVAWYKQEYPDNMETVNTTDPEQLVQDVSSTAVLTPLDDDLVGEIQEIKDR
GNWTGRFDFLMSLLGYSVGLGNVWRFPYLAYSNGGGAFLFPFILMLLLLGIPLMFMELAF
GQFAALGPAVIYDRFCPLFHGLGYGMITVSALVAIYYTVIIGWCILYLFLSFTAELPWES
CGEWATQYCYSHVEAEACHAVNHSVYYHRQCYNASMAELHNITELARNQTRHAPAQDFFE
QGVLNMSTGIEEMGNIQWKIALCLLAAWTLTFAALSKGVKSTGKVVYFTALFPYVVLCIL
FFRGITLPGSIVGIEYYLTPRFDKLGDAKVWSDAAAQIFFALSPAWGGLITLSSYNKFHN
NCFKDAMIVSVGNICTSIFAGFVIFSIIGYLAQELNMPVDKVVDQGAGLAFVVYPDVVTR
LPVSPLWSILFFVMMITLGMGSEFALLETVLTAIQDTYPQLRSKKTWVVLVVCIMGFLCG
LSVTTRGGMYLLQLMDAYVSSWMVFVMAALECIIVGWIYGGERFIEDIELMIGRQKRSFH
TYFKVFWQFLSPVTLLSVLIFNLIQYKPLKFDKYVYPVWANGVGWLLSLIPMLFIVSLMI
YQLKNVAPGELSLGEKFRYLLRPSKEWGPAHKVPTFKLDDDEIVPDTNTISNPNFSSSNP
FETKI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaataccataaagtccgcacggccagtgatgggcaaatagtgacaaatataaat
ccaaacaattacaaagacgggaaagtgtctaaacgtagtattccggatattgctgcggaa
attccattgatacctgaagctgaactggagcagagaggcacagagaaatatcagagtgac
tcggatccttcagctaacaagaagtggggagtagcttggtacaagcaggagtaccccgac
aacatggagacagtgaatacaacagacccagaacagcttgtacaggatgtatccagtaca
gctgtacttactccccttgacgatgacttagttggtgagattcaggagatcaaagatcga
ggaaactggacgggcaggtttgatttcctcatgtccctcctcggatactctgttggactt
ggaaatgtatggagatttccctacctagcctacagcaacggtggaggagcattcctgttc
cccttcattttgatgttgttgttacttggaatacctctcatgttcatggaactggcattt
ggacagtttgctgcgcttgggcctgctgttatctacgacagattctgtccactctttcat
ggattgggatatggtatgatcaccgtgtcagctctggtagccatttattacaccgtcata
ataggctggtgtattctgtatctcttcctctccttcactgctgaactaccctgggaaagc
tgtggtgaatgggccacacaatactgctattcacatgtagaagctgaagcctgccatgct
gtcaatcacagtgtttactaccatcgacaatgctacaacgcctccatggccgagctacac
aacatcacagaacttgccagaaatcagactagacatgctccagctcaagatttctttgaa
caaggtgtgctcaacatgtcaactggtatagaagagatgggtaatatccagtggaaaatt
gctctgtgtctcctcgcagcttggaccctgacattcgctgctctcagtaagggagtcaaa
tctacaggaaaggttgtctatttcacagctctgtttccttatgttgtgttgtgtatcctt
ttcttccgtggaatcacattgcccggatcaatcgtaggaattgagtactatctaacaccc
agatttgacaagcttggtgatgcaaaggtgtggtcagatgctgcagcccagatattcttt
gctctcagtcctgcatggggaggactcatcacgctgtccagttacaacaagtttcacaac
aattgtttcaaggatgcgatgatagtatctgtagggaatatttgcacaagtatttttgcc
ggatttgtcatcttctcaatcatcggttacctcgcccaggaactgaacatgcccgtagat
aaggtggtggaccaaggtgctggtctggcttttgttgtctacccagacgttgtgacgagg
ttaccagtctcgcctctatggtccatcctgtttttcgtgatgatgatcacactgggcatg
ggcagcgagtttgcccttctcgagactgtgctgactgctattcaggatacctaccctcag
ctgaggagtaagaaaacctgggttgtactagttgtctgcatcatgggattcctctgtgga
ttgtctgttaccacacgtggcggaatgtacctacttcagttgatggatgcctatgtttca
agttggatggtttttgtgatggctgcccttgaatgtataatagttggatggatatatggt
ggggagagattcatcgaggatatagaactgatgattggtagacagaaaagatcatttcat
acatactttaaagtgttctggcagttcctgtcacctgttacactcttgagtgtattgata
ttcaacctgattcaatacaaacctctgaagtttgacaagtatgtgtacccagtatgggca
aacggagtaggttggctcctatctcttatacccatgctcttcattgtgtcattgatgata
tatcagctcaagaatgtagcacctggagagctcagcttaggagagaaattccggtactta
ctaagaccatcgaaggaatgggggcctgcccataaagtacctacatttaaattggatgac
gatgagattgttcctgacactaacactatatcaaatcccaatttttcttcatcaaatcca
tttgagacaaagatataa
DBGET
integrated database retrieval system
