Argopecten irradians (bay scallop): 138329502
Help
Entry
138329502 CDS
T10542
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03022
Basal transcription factors
airr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138329502
09124 Replication and repair
03420 Nucleotide excision repair
138329502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138329502
03400 DNA repair and recombination proteins [BR:
airr03400
]
138329502
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138329502
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138329502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
138329502
NCBI-ProteinID:
XP_069132638
LinkDB
All DBs
Position
8:16453578..16467864
Genome browser
AA seq
568 aa
AA seq
DB search
MSSNRSSEDVLLIVNHVRHKKTDGVLYLMGERMGWMVESKSSFSLSHMYSDIKSQKISPD
SKDKVQLQVVMHDGSAKTFHFTNSKGRDAGVRDRDSVKELLQQLLPKFRSKISSELEEKN
RLLQESPELFQLYKDLVVSGVVTAEEFWESRADQLSNKGKQEGSKQAVGVSAAFLADIKP
QTDGCNGLKYNLTADVIESIFRTYPMVRKKHAENVPHEMSESEFWTRFFQSHYFHRDRTV
ISSKDVFSDCAKNDDREIKDEVTRKVNDPLLDMLKMTDSNSGDGFGGVSDERRLTTNQTN
LTMIRRFNHHSTMVLKACERNKTPQETTAETSGTSDNNSKRTNGAVSHTVTNGDTDASCS
SDLFIASSAKRARIKEKLEYEDLEGKTQSKNVNLRLHKTDGYLHGPRPVVASKYLTSDDA
VSASHSVSQEMSDWAPELSNVLRGSVALGVLGELSPGGSLMYGTSHQQLHNMVATDIQDE
LKKQYTALQELLRHFWTCFPASSKFLEEKVCRMKSTLERFQVTKLLPLKESLKQHHYTID
LVGHLEELLSTAYAKFDSWQARKMAKRS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaacagatcttcggaggatgtcctgttgattgtgaaccatgttagacacaaa
aagacagatggggtactatacctcatgggagaaaggatgggctggatggtggaaagtaag
agtagcttctctctcagccacatgtactctgacatcaaaagtcaaaagataagtcctgac
tccaaagataaagttcagcttcaggttgtgatgcatgatggcagtgctaagacattccac
ttcaccaactcgaaaggtcgagacgctggggtcagagatagagacagtgttaaggaactc
ctacaacagctactgccaaagttcagaagcaaaatcagcagtgagctagaggagaaaaac
agattactgcaggaaagtccagaattgtttcagttgtataaagacttggttgttagtgga
gtggtaacagcagaggagttctgggaatctagggctgatcaactttcaaacaaaggcaag
caagaaggcagcaaacaggcagtaggagtgtcggcagcatttctggcggacattaaaccc
cagacggacggctgtaatggtctcaagtacaatctcacagcagacgtgatagaatctata
tttaggacctatcctatggtgagaaagaaacatgctgagaatgtaccccatgagatgtca
gaaagtgaattctggacccggtttttccagtctcactacttccatagagaccgaactgta
atcagcagtaaggatgtcttttcagactgtgccaagaatgatgaccgagaaataaaagac
gaggtgaccagaaaagtaaatgatcctctcttggacatgttgaaaatgaccgattcaaat
tctggtgatggttttggcggagtgtccgatgaacgtcgactcaccacaaatcagaccaat
ctaacgatgattcgcaggtttaaccaccactccactatggtactaaaggcgtgtgaacgt
aacaaaacgcctcaggaaaccactgctgagacaagtggcacaagtgacaataactctaaa
aggaccaatggagcagtttctcatacagttactaacggtgatactgatgctagttgcagc
tccgatttatttatagcatcctccgcaaaaagagctagaattaaggagaaactggaatat
gaagatttggaaggtaaaacacaatctaagaatgtgaatttaagactgcataaaactgat
ggctaccttcatggcccaaggcctgtggtggcgtccaagtatttgacaagcgatgatgca
gtgagtgcctctcattcagtgtcacaggaaatgtctgactgggcaccagaactctccaat
gtactccgaggatctgttgctctaggtgtattgggggaactttccccgggtggttctctg
atgtacggtactagtcaccaacaattacataatatggtagctacagacatacaggacgag
ctgaagaaacaatacacagcactacaggaacttctcaggcatttctggacctgcttccct
gcctcctctaaattcttagaagaaaaggtttgtagaatgaaatcaacgctagaaagattt
caagtaaccaagctgcttccattgaaggaatctctgaaacagcatcactacacaatagat
ctggtgggacatttggaggaacttctgtctacagcttatgcaaaatttgattcttggcaa
gccaggaaaatggccaaaaggtcatga
DBGET
integrated database retrieval system
