Argopecten irradians (bay scallop): 138329515
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Entry
138329515 CDS
T10542
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
airr Argopecten irradians (bay scallop)
Brite
Membrane trafficking [BR:
airr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
138329515
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138329515
NCBI-ProteinID:
XP_069132653
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Position
8:complement(16723116..16838006)
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AA seq
1878 aa
AA seq
DB search
MKILVAVVLLCTTFKEIQGFPCTCPPHLFSCGNCICIPERWACDGDNDCQNNFDEEHCVT
GTTPTCPANHSPCDNDRCVSNDWICDGDNDCGDNSDELKCSVSTGSCDENEFRCDNGQCV
PTGWRCDHDNDCGDNSDEKCLTEVMMCSSKQFACGDGSCIPQSWRCDRDPDCTDGADEKK
CNKEKLFCGKDEFKCLHSFTCIPKRLKCDLNNDCGNWEDEADCALFSECKDEEFRCNDTM
CINKEWRCDGDIDCDDRSDEENCSLSTVCATEEFRCDTGLCIEKKFHCDGYYDCPDNSDE
RGCANSKECGKKQFQCRNHNCIDNKLVCNGVDDCDDKSDERNCNNGKTGACGIAQFLCKN
KQCIGNKKVCNFVDDCGDNSDEEDCEFPGDCYVNNGDCEQFCTSTPKGAHCSCKLGFQLR
EDRKTCEDLNECSWEGTCSQICQNQPGSYSCQCVEGYKLKPDKRGCKARGGKAYLIFANR
VDIRKLLPDQSEFDSILEGLPNAIALDFHHEKGLVFWSDIALDKIKRAYINGSQIRDVVK
YGLESPGGIAVDWEHNLLFWADSGTSTIEVTDLEGKYRKVLFWNQMEKPRAIVVHPGQGS
IFWTDWGSVPKIERGNMDGSGRLVLANTSLFWPNGLTLDYATDKLYWADAKHHVIECSDL
FGKNRRTVIDRGLPHPFALTLFEDELYWTDWHTKSINKANKFTGNDVETIRNRLHFPMDI
HTFHPQRQPMFDNHCGGNNGGCSHLCLPNRHDYSCSCPTGQHLSEDRHTCIQAMENFLVF
STRSDLRRISMDTPDKTDVVIPLVNVVSAVGVDFDASLDMIYWTDTGTDTISRAHWDGSQ
EEVVVGNCLEFPTGLAVDWLGRKMYWTDSELDVIEVSNLNGTVRSILIWERLDQPRDIIV
DPNRGYMYWTDWGKNAKIEKAGMDGKGRHALISTNLTWPNGLALDQKRNRIYWTDAGRKM
IESATTEGLERQVIISVDLPRPFGLALHNNQIFWTDWIDKGIHMASKFDGSSRQTLRSNL
GHVMDVRMFHKPKQKRQTPCQVNNGGCSHLCLNNAEPARYSCACPTGVVMKSDGKTCEDD
MTNFLIFARRTDIRKISLEVEYFADVVIPLGELRNAIAVDVDSVRGKLYWTDTVLDKVMR
ANLDGSQVEEVIRNGLDTPDGLAVDEVGGKIYWTDTGLNRIEVADIDGTMRKVLFWRDID
KPRAITLHYEAGFLYWTDWGKNPKIERADMDGQNRVTVIQDNLGWPNGLVIDRPTGRLIW
ADARMEVIESTDLHGQNRRVLVSKINHPYGLTVAGNHLYWTDWLKMAIFQADKDSGQNQT
IRRRNMSGLMDIHAVKLQREGTAVVNKCGRNNGGCSHLCLPNPRGYSCVCPTGLLMTEDK
KTCNEMPSKYLLFASRGSIRHISLDTNDLTDVFLPMNDLHNVIALDYDKRDNKMYYTDVH
LDVIRRSNLDGTEPETIVSKNLETTDGLAVDWIGRNLFWTDTGRDVIEVAWLDGSYRKRL
IYENLDEPRAIALFPSKGLIYWTDWGAEPKIEKAFMDGTNRSVIIRTSLGFPNGLSIDYS
ANRLYWVDAKLDKIETSDLAGENRVTLIQHISHPFGLVVYGDHIYWTDWQTELIEKASKY
TGKDREVIQQSLEGLMDIEVVADDRQTGENGCSVNNGGCTHLCLANPYGYTCACPDKRDS
IACHVYPVNIHLMPDTDHHLTRQPHHPCSAEDEIQGLCEQTPMVESTSPVNVNWMLLVVS
LVILLVIVVVSVVACRIYKRRRRQAYDVDNGEFLALNFANPTYQKTSTETINSVSSTSSK
LWKIFRFNKNRDQVQFLESSQENGLNNSETCILVRHRDGGGHVSQPLSMSVNKNLFKAKT
ANQSKEQKASVPYRPVDT
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttggtggcagtggtattactatgcaccacttttaaagagatccaaggtttt
ccgtgtacctgtccaccccacctattctcctgtggaaactgcatctgtatcccggagaga
tgggcctgtgatggggacaacgattgccagaacaactttgatgaggaacattgtgtgaca
gggacgacacccacctgccctgccaatcactcgccctgtgacaacgacagatgtgtaagt
aacgactggatatgtgatggcgacaatgattgtggggataacagcgacgaactcaagtgt
tctgtttcaacaggaagttgcgatgagaatgaatttcgttgcgacaacggtcagtgtgtg
ccgacaggatggagatgtgaccatgacaatgactgtggtgacaactccgatgaaaaatgt
ctgacagaggtaatgatgtgcagtagtaaacagtttgcgtgtggcgatggctcctgtatt
cctcagtcgtggcgatgtgaccgagatcctgactgtacagatggagcggatgagaagaaa
tgcaacaaggagaagctgttctgtgggaaggacgagttcaaatgtctacattcctttacc
tgtatccccaaacgattgaagtgtgacctcaacaacgactgtgggaactgggaggatgag
gcggattgtgccttgttttctgagtgtaaggatgaagagttccgttgtaacgatacgatg
tgtatcaacaaagaatggcgatgtgatggtgatatagactgtgatgatcgctccgacgaa
gaaaactgtagtctgtcaactgtgtgtgcgacagaagagttccgctgtgatacaggcctg
tgtatagagaagaagttccactgtgatggctactatgactgtcctgacaatagtgacgag
cgaggatgtgctaacagtaaggagtgtgggaagaaacagttccagtgtcgaaaccacaac
tgtatcgacaacaagctggtgtgtaacggtgtcgacgactgtgacgacaaatccgacgaa
cgtaactgtaacaatggcaaaactggagcctgtgggattgcccagtttctatgtaagaat
aaacagtgtattgggaacaagaaggtgtgtaattttgtggatgactgtggtgacaactca
gacgaggaggattgtgaattccctggtgactgttatgtaaacaatggtgactgtgaacag
ttctgtacaagtacacctaaaggagcacactgctcctgtaagcttgggttccagcttaga
gaagaccgtaaaacgtgtgaggacttaaacgaatgtagctgggagggaacctgtagccag
atttgtcagaaccagccaggctcctatagctgtcaatgtgtcgagggatataaactcaaa
ccagacaagaggggttgtaaggctagaggaggtaaggcctacctgatatttgctaaccga
gttgacatccgaaagctactgccagaccaatcagaatttgactctatattggagggcctg
cctaatgctatcgctcttgacttccatcatgaaaaaggcctggtgttttggtcagacatt
gcccttgacaagatcaaacgagcttatatcaatggtagtcagatccgcgacgtggtgaag
tacggattggagagtccaggaggtatcgccgtagattgggaacataaccttttgttctgg
gccgactctggaacgtctactattgaagtaacagatttggaggggaagtaccgcaaggtt
ctcttctggaaccagatggaaaagccacgagctatagtagtgcatcccggtcagggctcc
atattttggacagactgggggagtgtcccaaagatagaacgtggaaatatggatgggagt
gggagattagtattagccaatacatcactattctggccgaatggtctcacactcgactac
gctacagacaagctgtattgggcagacgccaaacaccatgtcatagaatgttcagatctt
tttggcaaaaacagacgcacagtcattgatagaggtctgccccatcccttcgccctgacc
ttatttgaggatgaactttattggacagactggcacaccaagagtattaataaggctaac
aagtttactggaaatgacgtggaaacgatccggaatcgtctccactttcctatggacatc
cacaccttccatcctcagagacaacccatgtttgataaccattgtggaggaaacaatgga
ggatgtagtcacctgtgtctaccaaaccgtcatgattactcgtgttcctgtcctaccggc
caacacctgtcagaggatagacacacctgtatacaagccatggagaatttcctggtgttt
tctacaaggtctgaccttcgccgcatcagtatggacactccggacaagaccgatgtggtc
attcctctggtcaatgtggtcagtgctgtaggagtggactttgatgcctcactggacatg
atctactggacagacactgggacagacaccattagtagggctcactgggatggatctcag
gaagaggtggttgtgggtaactgcctcgagtttcctactggactggctgttgactggcta
ggacggaaaatgtactggactgactcggaacttgatgttattgaggtgtcaaacctcaat
ggaactgtccgtagcatccttatatgggagcgtcttgaccaaccacgagacattatagta
gatcctaacagagggtacatgtactggacggactggggaaagaatgctaagatcgagaaa
gcaggtatggatggtaaagggcgtcacgctctgattagcaccaacctgacatggcccaac
ggcttagcgctggaccaaaagaggaatagaatctactggactgacgctggacgaaaaatg
attgaatcagcgacaacagaaggattagaacgacaggtgattatttccgtggacttacct
cgccccttcggtcttgcactgcacaataaccagattttctggactgactggattgacaag
ggaatccacatggctagcaaatttgatggatcaagtcgccagacactaagaagtaattta
gggcatgttatggatgttcgtatgttccacaaacccaaacaaaaaagacagacgccgtgc
caggtaaacaatggaggatgcagccatctttgtctgaacaatgccgagccagcgcgttat
agttgtgcctgtccgactggagtggtgatgaaatccgacgggaaaacttgtgaagatgat
atgacaaatttcttgatatttgcacgtcgtaccgacattagaaaaatttctctggaagtg
gaatactttgctgatgttgtgattccacttggagaattaagaaacgccatcgcagtagac
gtggattctgtccgaggtaaactctactggacagacacggttctggacaaggtgatgcgg
gccaaccttgatggatcacaggtcgaggaggtcatacgtaacggccttgacacgcctgat
ggtctggcagtggatgaggtcggagggaagatttactggacagatacaggcctcaacagg
attgaggttgcagacattgacggtaccatgaggaaggttctgttctggagggacatcgac
aagccacgcgctatcacactccactatgaggctgggttcctgtactggacagactggggt
aagaacccaaagattgagagagctgatatggatggtcagaacagggtaacggtcatccag
gacaatctcggctggccaaacggtcttgtgattgaccgaccgacaggacgactgatctgg
gctgatgccaggatggaggttatagaaagtactgacctacatggccagaataggagagtc
ctggtgtccaagattaaccacccatatggactgaccgtagccgggaaccatctgtactgg
acggactggctaaagatggccatattccaggccgacaaggacagtggtcagaaccagacc
atacgccgtcgtaatatgtctggtctgatggacatccatgctgtcaaactccagagagaa
ggaactgctgtggtgaacaaatgtgggagaaacaatggtggttgtagccatctttgtctg
cccaatccccgaggctattcctgtgtctgtccaactggccttctcatgacggaggataaa
aagacatgtaatgaaatgccaagtaagtacctgttgtttgcaagtcgtggtagtattcga
cacatctccttggataccaatgatctgactgatgtttttctacctatgaatgatcttcac
aatgtcatagctttggactacgacaaacgtgacaacaagatgtactacaccgacgtacac
ctggacgttatcagacgttcaaacctagatggaacagagccagagacaattgtctccaag
aatcttgagacgacggatggactagcagttgattggattggacgcaatcttttctggaca
gatacaggccgagatgtaatagaagtggcttggctggatggttcctacaggaagaggttg
atatatgaaaatctagatgagcctcgtgctatagcactgttcccaagtaaagggctgatc
tactggactgactggggagcagaaccaaagatagagaaggcctttatggacggcaccaac
agatcggtcatcatacggaccagtttaggtttccccaatggattgtccattgattactcc
gctaatcggctttattgggtggacgccaaactggacaagattgagacttcagacctggca
ggagaaaaccgagtgaccctgatacagcatatctcccatccttttggtctagttgtgtat
ggagaccatatatactggactgactggcagacagagctgattgagaaggcaagcaagtac
acaggcaaggaccgtgaggttatacaacagagtttggagggtctgatggacatagaggtg
gtggcagacgacagacagacaggtgagaatggctgttctgtaaacaatggcggatgtaca
cacctgtgtttggctaacccttatggatacacatgtgcctgcccagacaagcgcgacagc
atcgcctgtcatgtgtatccggtgaacatccatctaatgccggatacagaccaccatctc
accagacaacctcatcatccctgctctgctgaagatgaaatacaaggactttgtgaacaa
acaccaatggtggagtcaaccagtccagtgaatgtcaattggatgctgcttgtcgtatcg
ctggtcatccttctagttatcgtagtggtcagtgtggtggcctgtcgtatttataaaagg
cgtagaagacaagcttatgatgtagataatggagaattcttggctctaaactttgccaat
ccaacatatcaaaaaacaagtacagaaacaatcaactctgtatcatctacttcctccaaa
ctctggaaaatttttcgttttaataaaaatcgtgatcaggttcaatttttggaatcatca
caagaaaatggactcaataattctgagacttgtattttagttcgacatagagatggcggt
ggccatgtgtcgcagccgctgtctatgtcagtaaacaaaaacttatttaaagctaagact
gctaatcaatctaaagaacaaaaagccagtgttccatatcgccctgtggatacgtga
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