Argopecten irradians (bay scallop): 138330309
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Entry
138330309 CDS
T10542
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03420
Nucleotide excision repair
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138330309
09124 Replication and repair
03420 Nucleotide excision repair
138330309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138330309
03400 DNA repair and recombination proteins [BR:
airr03400
]
138330309
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
138330309
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138330309
TCR (transcription coupled repair) factors
Cul4-CSA complex
138330309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
138330309
NCBI-ProteinID:
XP_069133914
LinkDB
All DBs
Position
8
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AA seq
1140 aa
AA seq
DB search
MAYNYVVTAHKPTAVNACVTGNFTSSDDLNLIIARNTRLEIYVVTPEGLRPIKEVGINGR
IAVMELFRPPGESKDLMFLLTSRYNAMILECNQKGDNIDIITRAHGNVQDRIGRPSETGI
IGIIDPLCRVIGLRLYDGLFKVIPLDRDNKELKAFNIRLEEQIVVDMQFLHGCTTPTLIL
IHQDQHGRHVKTYEISLRDKEFQKGPWKQDNVETEACMVIAVPEPFGGALIIGQEIVTYH
KGDNFVPIAPPVIKQSTLVCHGKVDSNGSRYLLGDMMGRLFMLLLEKEEKMDSTVAVKDL
KVELLGETTVAECITYLDNGVVYIGSRLGDSQLIKLDSEADANGSYVTEMERFTNLGPIL
DMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWSLRVSSSDY
DNMIVLSFVGQTRVLMLNGEEVEETELAGFEADQQTFLCANVVHSQLLQITPVSVRLVNC
ESHHLVSEWKHAGGKNISLASSNTSQVVVAVGSELYYLEIGQGEVKELGKTTMEHEVACV
DITPLREGSDKAELCAVGLWTDISARVLKLPTFESLNVEMLGGEIIPRSILMTTFEGIHY
LLCALGDGSLFYFNLNIDTGYFCEKRKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNHMCPLNSEGYPDSLALANDSTLTIGTIDEIQKLHIRTIPLMESP
RRIAYQEGSQTFGVISTRMDVQNSNGMTPSRPSASTHAAMTTSSSNVKMVTTGTSTMSEH
TFGDEVEVHSLLIIDQHTFEVLHAHQLLQNEFATSLISAKLGEDPNVYYIVGTALVHPEE
AEPKQGRIIMFHYHEGKLNQVAEKEIRGAAYTLLEFNGKLLASINSTVRLFEWTAEKELR
LECSYFNNIVALYLKTKGDFIQVGDLMKSITLLLYKPMEGTFEEIARDCNPNWMTAVEIL
DDDNFLGAENSFNLFTCQKDSAATTEEDRQNLQEVGMFHLGEFVNVFRHGSLVMQHSSEN
TMPTQGSVLFGTVNGAVGLVTQLTQDFYNFLLDVQGRLAKVIKSVGKIDHSFWRSFHTER
KTEPAEGFIDGDLIESFLDLSRDKMQETVQGLQMDDGSGMKREATVDDLVKMIEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcatataactatgttgtaacagctcataagccgacagcagtgaatgcttgtgtaaca
ggaaatttcacatcttcagacgatctcaatctaataatcgcgaggaacacacgactagaa
atctatgtggttacccctgaaggtctgcgtcctattaaagaagttggcatcaatggaaga
atcgctgtcatggagctgtttagacctccaggagaaagtaaagacctcatgttcctgctg
acgtcacgatacaacgcaatgatcctggaatgtaaccagaaaggagacaacattgatatc
attaccagagctcacggcaatgtacaggacaggattggtcgaccatcagaaacaggaatc
attggtattatagatccactttgtcgtgtaataggactccgactgtacgatggacttttc
aaagttatcccccttgatcgagataataaggagttaaaagctttcaacatcagactagag
gagcagattgttgtggacatgcagtttcttcatggctgtacaacgcccactctcattctt
atccaccaggatcagcatggccgccatgtgaaaacgtatgaaatatcacttagggacaaa
gagttccaaaaaggtccctggaaacaggataatgtggaaacagaagcctgcatggtcata
gctgtgcctgagccattcggtggtgctctaatcattggacaggaaatcgttacataccac
aagggagataacttcgtaccgatcgcaccaccagtcatcaagcaaagcacattagtctgt
catggtaaagtggattcgaatgggtctcgataccttctgggggacatgatgggcagactg
ttcatgttgctgctggaaaaagaagaaaaaatggattcaacggttgctgtcaaagacctt
aaagtagagcttcttggcgagactacagtagcggagtgtattacatatttggataatggt
gtagtctacattggctctagacttggggactcacagcttatcaagttggatagtgaagct
gatgccaatggttcgtatgtaacagagatggagagattcacaaatttagggcccatactt
gatatgtgtgtcgtcgacttggagcgtcaaggtcaaggccagcttgtgacttgctctggt
gcttacaaagagggttcccttcgcattataaggaatggtatcggaatacacgaacatgct
agtatagatctaccaggaattaaaggtatctggtcattacgagtcagttcttcagactac
gataatatgattgttctatccttcgttggtcagacaagagtgctgatgttgaatggtgag
gaagtggaggaaacagaactggctggatttgaagccgatcaacaaacgtttctttgtgct
aatgttgtccatagtcaacttctacagatcacacctgtctctgtacgcctcgtcaactgt
gagtcccatcacctggtcagtgaatggaaacacgcaggaggaaagaacatcagtttggcc
tcgagtaacacctcccaggtcgtggtcgctgtgggcagtgagctgtattatctggaaata
ggacagggagaggtcaaggagctcggtaaaactacaatggaacatgaggtggcctgtgtg
gacattacacccctacgggaaggatcagacaaggccgagctgtgtgctgtcggactgtgg
acagacatatcagccagagtcctcaagttacccacgtttgagagccttaatgtggaaatg
ctgggtggagagatcattccgaggtcaatactgatgacaacgtttgaaggaatccactac
ctgttgtgtgctctgggagatggctctctcttctacttcaatcttaacattgacacaggt
tatttctgtgagaagaggaaggtaacgttaggcacacagcccactgtgctgaagacattc
cggtcgctgtccaccacaaatgtcttcgcttgctcagaccgtccgactgtgatctactca
agtaaccacaagcttgtcttctccaatgtcaatctgaaggaagtcaaccacatgtgtcca
ctcaactccgagggttatccagatagtttagccctggccaacgacagtactcttacaatt
gggactatagacgagatccagaaactacacataaggactattcctctaatggaatctccc
aggagaatcgcataccaggaaggatcacagacgttcggtgtaatttccactaggatggat
gtgcagaatagcaatggcatgacgccgtcacggccgagcgctagtacgcatgctgccatg
actactagcagttctaatgtcaagatggttaccacggggacgagtacgatgtccgaacac
acatttggtgacgaggtggaggtacattcactccttatcatagatcaacacacatttgaa
gtgctccacgcccaccagttgctacagaatgagtttgccaccagtttgatatcggccaag
ctcggtgaggacccaaatgtatattatattgtgggcacggcccttgtacatccagaggaa
gcagagcccaaacaagggcggataattatgttccactaccacgaagggaagttaaaccaa
gtggcagaaaaagaaatccgaggagcagcgtacacactgttagagtttaatggcaaatta
ttagccagtataaatagtactgttcgattatttgaatggacagccgagaaggaactccga
ttagaatgtagttactttaacaacatcgtagctctatatttaaaaacgaagggtgatttc
atacaagttggggacctgatgaagtccataacgcttctcttgtacaaacccatggaaggg
acgtttgaagagattgcccgagactgtaatcctaactggatgacagcggtggaaatactt
gatgacgacaattttcttggtgctgaaaactctttcaatttgtttacatgtcagaaggac
agtgcggccactacagaagaagaccgacagaatctacaagaggttggaatgttccattta
ggagaatttgtcaatgttttcaggcatggttctcttgttatgcagcattcaagtgagaac
acgatgccaacacagggttcagtgctttttggtaccgtcaacggtgccgtaggtcttgtg
acacagctgactcaagacttttacaacttcctactcgacgtacaaggtcgcctagccaag
gtcatcaaaagtgttggaaaaattgatcattcattctggcgatccttccacacagaacgg
aagacagaacccgcggaaggcttcattgacggggatctcattgaaagtttcttggattta
tcccgggataagatgcaggaaacggtccagggtttacagatggatgatggcagcggaatg
aaacgagaagcaactgttgatgacttagtcaagatgattgaggaattgactcgaatccac
tga
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