Argopecten irradians (bay scallop): 138330373
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Entry
138330373 CDS
T10542
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138330373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138330373
03036 Chromosome and associated proteins [BR:
airr03036
]
138330373
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138330373
Coactivators
SAGA/TFTC/STAGA complex
138330373
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
138330373
STAGA complex
138330373
TFTC complex
138330373
SAGA complex
138330373
SLIK complex
138330373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR41
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_SCAP
WDR90_beta-prop_4th
ASA1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_Nup120_160
PAC11
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WD40_RFWD3
WD_LRWD1
Beta-prop_DCAF12
TRM82_WD
PROPPIN
Tricorn_2nd
WDR54
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
138330373
NCBI-ProteinID:
XP_069134055
LinkDB
All DBs
Position
8
Genome browser
AA seq
626 aa
AA seq
DB search
MPLYFSLLTPCTGCTERSVRMKRIRYEQIHSSVHQYLKRRQYSDHEVIEKKEHRWVHDVK
DMALKSTAAGETTTENILLYSSISGDTTVCEQQFSRLKTYLSEAIDPFKEELASILYPLF
VHIYLHLIYNGHKAPAHKFYSRHVKLFESAEELVVMEALHKLYNRTEVISCKEAMEFREH
KFKVCLSQEALDYLMKYLKVDDNMMLLQIFNQHLKVEVTKEDKLTLDLKGGSNDKHVSGG
NERKRPTDIVRLLQQCIKQVREGPPCMSSICFYTFLNAYQGLCTVDISGDRSYLSAGFED
SSVKLWSITPGLIQSYRTPTDPSKLYLSADFWTSESSCGDDGEEDGDKTDGENNREEMKP
QYREVATMRAHNGSVYKTCFTADSEALLSCSEDGSVRLWDLKTHTNRVCYRGHNYPVWDI
DTSSIGNYFASASKDSTAKLWSTDRTYPLRSFIGHSYDVDVVKFHPNCNYLATGSSDRTV
RLWSLQDGKSVRLMQGHRSSVLALAFSPNGQYLASAGDDRRIRVWDLTSGNIYKELKGHI
DTIHCLSFNRDSTLLASGGLDCCIKIWDIRKGVNLSNNNSSNNHNNNNPPDANISPEQLG
SFPTKSAIVTYLQFAQHNLLYAAGSI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttattttagtttgttgacaccatgcaccggatgcacggagagaagtgttaga
atgaagcgtatacgttacgaacaaatccactcctctgtgcatcaatatctgaagagaaga
caatattcggaccatgaagtgatagagaagaaggaacacagatgggttcatgatgtgaaa
gatatggctctcaagagtacagcagcaggggagacaactacagaaaatatattgttgtac
agcagcatttcaggggacacaactgtgtgtgagcaacagttctccagattaaagacttac
ctgagtgaagccattgacccttttaaggaggagttggccagtatcctgtatccactgttt
gtacatatctatctccatctcatctacaatggacacaaggctccagcacataagttctac
agtcgccatgtgaaattgtttgagagcgccgaagagctagtggtcatggaagccctacat
aaactctataaccgtacagaggtcataagctgtaaggaagctatggaattcagagaacac
aagtttaaagtttgtctgtcacaagaggctttggactacctgatgaaatatctcaaggtt
gatgataacatgatgcttttgcaaatattcaaccaacacttaaaagttgaagtgacaaaa
gaagataaactcactctggatctgaagggaggttctaatgacaagcatgtgtctgggggt
aatgagagaaaacgacctacagacattgtgagactattacagcagtgtatcaaacaagta
cgagagggaccgccctgtatgtcgtccatctgtttctacacattcctcaacgcctaccaa
gggctatgtacagtggacatatccggggacaggagttacctgagtgctgggtttgaggac
tcctctgtgaagttgtggagtatcacacccggtctcatccagtcctatagaacaccaaca
gatccctccaaactttacctgtctgccgacttctggacgtcagagtcatcgtgtggggac
gatggagaggaagacggggacaaaacggatggagagaataacagagaggaaatgaaaccc
cagtaccgcgaggtggctacaatgagagcacacaatggttctgtgtataaaacgtgtttc
actgcggactctgaagctttattgtcatgttcagaagatgggtcagttcgtctttgggat
ctgaaaactcacaccaaccgagtgtgttatagaggtcacaactacccagtctgggacatt
gacaccagttcaattggaaattattttgcctcagcatcaaaggacagtacagccaagtta
tggtcaactgaccgcacctatcctctgaggtcgttcatcggtcactcgtacgatgttgat
gttgtgaagttccacccgaactgtaactacctggcgacgggatccagtgaccggactgtc
cgactgtggagtctacaggatgggaagtctgtccgtctgatgcagggacacagaagttcc
gtcctggctctcgccttctcaccaaacgggcagtacttggcctctgctggtgatgaccga
agaattcgagtttgggacctgacctcagggaacatttacaaggaactgaagggccacata
gatactatacattgtcttagtttcaacagagatagcaccctactggcttcaggtggcctg
gactgctgtataaagatctgggacataaggaaaggtgtcaacttaagtaataataacagt
agtaacaaccacaacaacaataatccgcctgatgcaaatatctcaccagaacaactggga
tcatttccaaccaaatcagccattgtgacttatttacaatttgctcaacacaacctgctg
tacgccgcaggcagcatatga
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