Argopecten irradians (bay scallop): 138331153
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Entry
138331153 CDS
T10542
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like
KO
K18735
protein SMG9
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138331153
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138331153
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Ortholog
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GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
GBP
MMR_HSR1
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
138331153
NCBI-ProteinID:
XP_069134725
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Position
9
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AA seq
476 aa
AA seq
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MSSQSDRDGRGMRRRPRRGGRGGGPERQRKEDYGGETSEKPRPIILAKPATQEQGSSSTT
AGATPGGGGSTTPSALGSKTPEKMVMLRNRDDAPSTPSGNLTSIPASLTSGETPPPQPTL
TVQRSQHFPTESSSQNRLAPPPEMTRCAKLVDDSQMWQESAMEMLVDQTDFLVVGVIGLQ
GSGKSTVMSLLAGNSPDDSHRQFLFPPQTQETIELCEHQTNGIDMFVSGERIIFLDTQPV
MSASVLDKMIRHDKKIGSEYSTAENCIEIQSLQQAAFLMNVCHVVLVVQDWFTDTSFLRF
LLTAEMLKPSSPSSNHDNPSGEDSSDYFPNLVFIQNKAAWDHFNVETFNSMQQTLTKVFE
TSKLKYRGSVTMADGKMLPGLNRRSVKTDINLYPLPHKDSDGKMDQDAILTLLPEYRGYP
SFTTLINGLRQQIYTLPREQLTHTTLSEKNWFHYAARTWDAVKKSQLMAEYNRLLH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacagagcgacagagatggtcggggaatgaggcgacggccaagaaggggagga
agaggaggtggtcctgaaaggcagcgcaaggaggattatggaggtgaaacatcagagaag
ccacgtccaattatattagccaaaccagctacacaagaacagggaagttcttccacgaca
gctggagccactcctggtggcggtggatcgaccacaccttcagcactcggaagtaaaact
ccagaaaaaatggtgatgctgagaaaccgtgatgatgctccttctacaccatctggaaac
ttgacaagtattccagcatcgttaacctctggtgaaacaccacctcctcagccaacactt
acagtgcagcgctctcaacactttccgactgagagttcaagtcaaaatagactggcaccg
cctccagaaatgactaggtgtgcaaagttggtagatgattctcagatgtggcaagaatct
gcaatggagatgttggtagaccagactgatttccttgtggttggagtgatcggattacag
ggtagcggaaagtctacggtcatgtctctgttggcgggtaattctccagacgacagtcac
agacagttcctgtttccacctcagacccaggagactattgagctttgtgaacaccaaaca
aatggtatagacatgtttgtatctggagagcgaatcatctttcttgacacacagccagtg
atgagtgcatcagtcttggataaaatgatccgtcatgacaagaaaattggttccgagtac
agtacagcagaaaattgcatcgaaatacaatctctccaacaagcagccttcttgatgaat
gtgtgtcacgtcgttctggttgttcaggattggttcacagatacaagctttctcaggttt
ctgttgactgccgagatgctgaaaccatcatcaccgtccagtaaccatgacaaccctagt
ggggaagactcgtcagattattttcctaatctagttttcatacagaacaaagctgcatgg
gatcatttcaatgtggaaacttttaactccatgcaacaaacattgacaaaggttttcgaa
acgtccaagttgaaatacagaggttcagtaacaatggctgatgggaaaatgttgccaggt
ttgaatcggagatcggtaaaaacagatatcaacctttatcctcttcctcataaagactct
gatggtaaaatggaccaagatgctattttgactctgctgcccgagtacagagggtaccca
agctttactacgctgatcaatggccttcgtcagcagatatacactctcccacgggaacag
cttacccacacaacactgtcggagaagaactggtttcattacgctgcaaggacatgggat
gctgttaagaaatcacagttgatggcagagtacaatcgccttctgcactga
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