Argopecten irradians (bay scallop): 138331340
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Entry
138331340 CDS
T10542
Name
(RefSeq) protein retinal degeneration B-like isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138331340
Membrane trafficking [BR:
airr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
138331340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
Ribosomal_S14
Transthyretin
Motif
Other DBs
NCBI-GeneID:
138331340
NCBI-ProteinID:
XP_069134985
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Position
9:8824607..8882380
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AA seq
1338 aa
AA seq
DB search
MLIKEYRIGLPMSVDEYRIAQLYMIQKKSREESHGEGSGVEILTNEPYTDGPGGDGQYTY
KIYHIGSHLPGWFRAILPKSALMVEEEAWNAYPYTKTRYRCPFVEKFLLEIETKYLNDGG
SQENVFGMSPTEIKQRQLDFIDLVKDQLPSSDYKKEEDPKLYRSSKTGRGPLTDSWWEEY
SKETKVKGSDKAIMTAYKLCRVEFRYWGMQNKIERFIHDIGLRKTMLRAHRQAWCWQDEW
FGLKLSDIRQLELETQLALAAKMATTSNHNEEDEPHEESQNEIEISLNVRPKMPVSASNQ
EIGSGKHYSDVEEVINPIPHRQSFSNSTRSRSQGTNSRDISASRIFESLERLQESSSESE
DEFYDAKDASFCDSEFSSDSESDTDVETEEEQESDCAVMVRSSSNELINSNDEFSDAVST
MSFDPNDSPFERRLTKYKMHYHDRHQDKETSPPHSAGCKSNVLFLVLHGGSVLDSSNLEQ
ASKRVDFNMIKSTFESVIRNNYPGALGHIAFRLVPCPQICTEALSILSSVSPYSFESLAP
NTGESGVIWTQEFVPLGAISLFVTSNPDYHEYVNKMVAKANLVYHEFMLSDEGKGFTGQV
CLLADAMGSLLGYDALCQANANYTRGLSTFDSHCSLNDSDSSAIRQEQDQDSTLKRDAQL
DPSASAFRRGENTQNSGKSNLETSRQLSHSDPDLSAGGSLSDKHFNRSDFVSSECKLRRQ
CSANVRPHQTHLSVSDGAKDECGRRTSMGSYNDGSVIKFDFDVSDFFMLGSPLGLVLAYR
RMFFGDDRNWCPCSPACHQVYNMIHSSDPTAARLEPLLHNSFKHIFPVKVPRYTKFPVGD
GEPIHVVETIQSNLSLFINNRRGSAGPSLQRQNSVSSVVSQISGLGESMVSSITNVTSKW
WGNKRIDFTLYCPEVLHSFPTSALPHLFHSSFWESSDVAAFVLRQILRHDILSLDMEKDL
DRLTVSPESANLPREKWLKRRTTIKVKNLQPNHRGNDVIVMEDTAQELSARFMYGSFDVT
SLSGEKVDIHVMDQLTGEWKFLGTAVTDKHGRLNYTIPEDKRLHQGMHSVKIVVRGDHSC
ADFFLTVLPKKTETVVFSIDGSFTASMSISGRDPKVRAGAVDVVRHYQDQGYLILYVTAR
PDMQHRKVVSWLAMHNFPHGMVAFMDGLSKEPLRQKLNYLKGLVSKAGIVYKGAYGSNKD
IYVYRELGLTSQQMFIVGKASKKQLGQAQILSDGYAVHLQSLQLLGRAAVGNARMFIRKG
CMTVPNQSETRKSEGKRAVKRVSSNSASGGDFLKPQDVLITVSDTGNTIVQNSQADFRTT
ARARGSSPRPKVPTDVPR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaaggaatatcgcattggtctgccgatgagtgtggacgagtatcggatagcc
caactttacatgatacagaaaaaaagtcgagaagaaagccatggcgagggaagtggtgta
gaaatcctgacgaatgaaccctacaccgatggtccaggcggagatggtcaatatacctac
aaaatataccacataggcagtcacttaccaggatggtttcgtgccattttacccaagtct
gccctgatggtagaagaggaagcatggaacgcctacccctacacaaagacccgatacaga
tgtccatttgtagaaaaatttctactggagatagagacaaaatacttaaacgatggtgga
agtcaggaaaatgtgttcggcatgtcaccaacagagattaaacaacgacagttagacttc
atagacctggtaaaggatcagcttcctagtagtgactataaaaaggaggaggaccctaaa
ctgtacaggtcgtccaagacggggcgtggcccactgactgacagctggtgggaggagtat
agcaaagagacaaaggtcaaagggtcagataaagctataatgaccgcctacaaactgtgc
agggtggagttccgctactggggcatgcagaacaaaattgagagatttatacatgacatt
ggtctgcggaaaacaatgctccgtgctcacagacaagcatggtgctggcaggatgaatgg
ttcggtctcaaactcagtgacattcgacaactcgaactggaaacacaactagctcttgcc
gcgaaaatggctactacttcaaaccacaacgaagaggatgaaccacacgaagaaagccaa
aatgagattgaaataagtcttaatgtcagaccgaaaatgcctgtttccgcctcgaaccag
gagattggatctgggaaacattacagcgatgtagaggaagtcatcaatcccattcctcac
agacagtccttctctaactccacaaggtcaaggtcacaaggcacaaatagtagagatata
tctgcatcacggatatttgaaagtttagaacgacttcaggaatctagttcggagtctgag
gacgagttctacgatgctaaagatgccagtttttgtgactctgagttttcatctgactcc
gagtcagacacagatgtggaaacggaggaggaacaggaatctgactgtgcagtgatggtt
cgatcctcatccaacgaactcatcaacagtaacgatgaattttcagacgctgtatccacc
atgtcctttgatcctaatgattctccttttgagcgacgcctgacaaagtacaaaatgcat
taccatgaccgtcaccaggataaagaaacgtcacccccacactctgcaggctgtaaatcc
aacgtgttgtttttggtgttacatggaggaagtgtactggactccagtaaccttgaacaa
gcttccaagcgagtggatttcaacatgatcaagtcaacgtttgaatctgtgatacgtaac
aactatcccggagccctcggccatattgccttccgtctcgttccctgtccacagatctgt
acagaagcacttagtatattgtccagtgtaagtccgtacagttttgaatctctcgcacca
aacactggggaatccggggtgatttggactcaagagttcgttcccttgggagccatctcg
ctatttgtgacttcaaatccagactaccatgagtatgtcaacaaaatggtcgctaaagcg
aacctagtctatcacgagtttatgttgtcagatgagggtaaaggtttcactggtcaggtt
tgcctgcttgccgatgctatgggctcattgttagggtatgatgccttatgtcaggctaac
gctaactacacgcgcggtctcagtacgtttgacagtcattgtagtctcaatgattccgac
tcctcagccattcgtcaggaacaagaccaggattccaccctcaagcgtgacgctcaactc
gatccgtcagcatcagcattcagacgaggagaaaacacacagaattctgggaaatctaac
ctagaaacatcacggcaactgagtcacagtgacccagatttgtcagcaggaggaagcctg
agtgacaaacattttaatagaagtgattttgtgtcgtcggagtgtaaactacggcgtcag
tgttctgctaacgtacgcccacaccagactcacctgagcgtcagtgatggcgcgaaggac
gagtgtgggcgcaggactagtatgggcagttataatgacggctctgttataaagtttgac
tttgatgtctcagatttctttatgttgggatcgccccttggacttgttctggcctatcgt
cgtatgtttttcggggatgatcgtaattggtgcccttgtagtcctgcgtgccatcaagtg
tacaacatgattcactccagtgaccctacagccgctcgcctggaaccattactccataac
agttttaaacacatcttccccgttaaagtgccacgctatacaaagttcccagtaggtgac
ggagagcctatacatgtggttgagaccatacagagtaacctgtccctgttcatcaataat
cggcgcggatcggccgggcccagtcttcagcgacaaaacagtgtgtccagtgtcgtcagt
caaatctccggacttggagaatccatggtgtccagtataacaaatgtgaccagtaagtgg
tggggtaacaagcgtatagattttaccctatactgtcctgaagttctccactccttccct
acatcagccttgcctcatctcttccactccagtttctgggaatcttccgatgtagctgcc
tttgtactccgacagattttacgacatgacatcctcagtttggacatggaaaaagatctt
gaccgattgaccgtcagtccagagtctgccaaccttccccgagaaaaatggctcaaaagg
agaaccaccatcaaagtgaagaatctgcagcccaatcaccgtggtaatgatgttatagta
atggaggacacagctcaggaactaagtgctcgcttcatgtatggctcttttgatgtcacc
tcattgtcaggagaaaaggtggacatccatgtaatggaccagttgacaggggagtggaag
tttctgggaacggccgtcacagacaaacatggccgcctcaactacaccatcccggaggat
aaacgcctacaccaaggaatgcattctgtcaagattgttgtaagaggggaccacagttgt
gcagatttcttcctgacagttttaccaaagaagacagaaactgtcgttttcagcattgat
ggttcatttactgcaagtatgtcgatctcgggtcgcgaccccaaagtccgagccggagca
gtagatgttgttaggcattaccaggaccaggggtacttgatcctgtatgtgacggccaga
cctgacatgcagcaccgtaaggtagtatcctggctagccatgcacaacttcccgcacgga
atggtggccttcatggatggactgtctaaggagcctctccgacagaaactcaactatctc
aagggcttggtgtccaaagcgggaattgtgtacaagggtgcttacggctccaacaaagac
atatatgtatatcgggaacttggacttacatctcagcagatgttcattgttggaaaggct
tccaaaaaacaactaggacaggcacagattctatcagatgggtatgcggttcaccttcag
tcactacagctgctaggacgggccgcggtgggaaatgctcgtatgtttataaggaaaggt
tgtatgacagtccctaaccagagtgagaccaggaaaagtgagggcaagcgtgcagtcaaa
cgagtctcgtctaactcagcttcaggtggcgacttccttaaaccacaggatgtgttaatc
acagtgagcgacacaggaaatacaattgtacaaaacagtcaagctgatttccgtacaacg
gcccgcgcccgaggctcttcccctcgtcccaaggtacccacagatgttccacgatga
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