Argopecten irradians (bay scallop): 138331416
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Entry
138331416 CDS
T10542
Name
(RefSeq) transcription elongation factor SPT4-like
KO
K15171
transcription elongation factor SPT4
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138331416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138331416
03019 Messenger RNA biogenesis [BR:
airr03019
]
138331416
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
138331416
RNA polymerase I system
138331416
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
138331416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
HVO_0758
Motif
Other DBs
NCBI-GeneID:
138331416
NCBI-ProteinID:
XP_069135118
LinkDB
All DBs
Position
9:10616303..10619769
Genome browser
AA seq
120 aa
AA seq
DB search
MSLETVPKDPNRNLRACLFCSLVKTFDQFELDGCDNCEEHLHMKNNRDAVYDCTSANFDG
MVAMMSSEDSWVAKWQRIGRFVKGCYALSVTGRLPPGVVRELKRKGIMYRPRDVSQKLMT
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaaacagttccaaaggatcctaaccgaaatcttcgggcctgcttgttctgt
tcacttgttaagacttttgatcaatttgagcttgatggctgtgacaattgtgaggaacat
ttacacatgaagaacaacagagatgcagtttatgattgtacaagtgcaaattttgatggg
atggttgctatgatgagcagtgaagatagttgggtggccaagtggcaaaggataggtcgt
tttgtgaagggttgttatgctttgtctgtgactggacgtcttcctccgggtgtcgtgcga
gagctgaaaaggaaaggaatcatgtacaggccgcgggatgtcagtcagaaactaatgaca
tga
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