KEGG   Argopecten irradians (bay scallop): 138331515
Entry
138331515         CDS       T10542                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138331515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:airr03400]
    138331515
DNA repair and recombination proteins [BR:airr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     138331515
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 138331515
NCBI-ProteinID: XP_069135297
LinkDB
Position
9:complement(12997908..13014983)
AA seq 644 aa
MPEITVQHVVSYSSADKGFPADNLLKAEGTHKWKTTAPADKHATAVLQFEKASNIHSIDI
GNEGSAFVEVLVGKSSAREDKDYQVLLVASSFMSPMDSRNNTNRNSVRMFGKEKLSKTTA
SEKWDRVKVVCTQPFNKTSSYGLSFIKFHSPPAPGEKSEPAVGVKKLGAFLIKPEKEDDI
QTGSAFAKRSEVKETPPATGAAAIRAASRLSEESRSASISSPIASHKSKTSDSSLKYETS
EPSSSSKPSSLKAAPKMPENRSKRKHEFSDDVGGSTDDDDNSPPVKPPMKKQSTSLSSTA
SSLKSDTKATLKKTKSEPPRESPAKSFKRLLEGVVFSLSGFQNPFRGELRDMAMEMGGVY
KADWDKTCTHLICAFTNTPKYNQVKGKGRIVKKDWLQHCYKQKKRLSWRKYRLGDADFSS
DEEEEEEEKPAMMKTSSSKHKDSNDNDSHSKHRDSHGSKDDKAPLKKESTPKKIDAGVYD
NDTDVDSGEDTEDEVRRIKQKMDQDKKSKTDDVDMYGDSTDEDEPPPKKTPQKEVKMEAD
DDDKDLELPELPDLFTNKNFFLYGDFSVSERRLIIRYITAYNGELENYMTDKVNFVVTYN
KWDDNFDEALADNSELVFVKPKWIYSCHEKNKTMPFQPYIVVPD
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgcctgaaataactgttcaacatgttgtttcatacagcagtgccgataagggcttccca
gctgataacttgttgaaagcagaaggcacccacaaatggaagacaaccgctccagctgat
aaacatgctacagctgttcttcagtttgagaaagcatcaaatatccacagcattgacatc
ggaaatgaaggttcggcgtttgttgaagttttggtcggcaaatcatcagccagggaggac
aaagattatcaggtattgctggtggcctcctcgtttatgagtcccatggacagtcgtaac
aatacaaacaggaacagcgtacgtatgtttggtaaagaaaagctctccaagaccactgcc
tctgaaaagtgggatagagtgaaggtcgtttgtactcaaccatttaataagacgtccagt
tatggtttgtcatttatcaagttccattccccaccagctccaggcgagaaaagtgaaccc
gctgttggtgtaaaaaagcttggtgccttcttaatcaaaccagagaaagaggatgacata
cagaccgggtcagctttcgctaaacgatcagaggtcaaggaaactcctccggccacaggg
gcagcagcgatccgggcagcgtccagactgtcggaagaatcccgctctgcatcaatctca
tctccaatagcttcacataaatctaaaaccagtgactcgtcactcaagtatgaaaccagt
gaaccatcatcatcttctaaaccaagcagtctaaaggcagctcccaaaatgccagagaac
cgcagtaaaaggaagcatgagttcagtgatgatgtgggtggcagtacagacgatgacgac
aattcacctccggtcaaacctccgatgaagaaacagtccaccagtctcagttctactgcc
tcctcactgaaaagtgacacaaaagccacgctgaagaaaaccaaatccgaacctccgcgt
gaatcccctgcaaagtccttcaaacgtttgctggaaggagtggtgttttcgttgagtgga
ttccagaacccgtttaggggcgagctacgagacatggccatggagatgggtggtgtttat
aaggctgactgggataaaacctgtacacatctaatatgtgcttttactaatacaccaaag
tacaaccaggtgaaagggaagggacggatagtgaagaaagactggcttcaacactgctac
aaacagaaaaaacgtctgtcatggagaaagtataggcttggtgatgctgatttctccagt
gatgaagaagaagaggaggaggagaaacctgctatgatgaaaacatcatccagtaaacac
aaggattcaaatgataatgattcacatagtaaacacagggattcacatggttcaaaggat
gataaagcccctttaaagaaagaatcaactcctaaaaagatagatgctggagtgtatgat
aatgacacagatgtggattcaggggaagacaccgaggatgaagttagaagaataaaacaa
aaaatggatcaggacaaaaaatcaaagacagatgatgttgacatgtacggagattcaaca
gacgaggatgaaccaccacctaaaaaaacaccacaaaaggaagttaaaatggaggcagac
gacgatgacaaagacttggaacttccggaacttccagatctcttcaccaacaagaatttc
tttctatatggagatttttctgtgtcagagaggcgtctaattatcagatacataacagca
tataacggagagctggagaactatatgacagataaagtgaattttgttgtaacctacaat
aaatgggatgacaattttgacgaggctctggcagataactccgaattagtgtttgtgaaa
ccaaagtggatttactcatgccatgagaaaaacaagactatgcctttccagccttacatt
gttgtgccagactga

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