Argopecten irradians (bay scallop): 138331733
Help
Entry
138331733 CDS
T10542
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
airr
Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138331733
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138331733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
138331733
NCBI-ProteinID:
XP_069135591
LinkDB
All DBs
Position
9:20298326..20330787
Genome browser
AA seq
2051 aa
AA seq
DB search
MNHPNPSGNGCSLEDCYANIFALTDICGIKWRKLTAKADYSPNTVDHLEDPVLESYSRCI
QADILCVWRRVQRNSDQPQRVIDQLSHHKELWIFWYGDEPSVLGNLLSPYLDESEHGSWD
KDKDKDKDNSLSYECRTLLFKALHNLIEKCLLSKGFARLGRWFVQPFDSTQTNTERGTHL
SFSFNFFLHGESSVCGSIDVKQHPPVWNLTPQHLTLAQENQANFQVILAPYGLNGTLTGN
SYRETDQSAHKILEEWGRFYPLNADDLKDDTSRPPPLVEVIVAGVRMKYPSCYVFLCDSE
ESPARVQPHTVSSTSRGQSGGQMTPPMSENLVGGETGIKILPSLHYSGNPSELNTDIVAN
TANAFSIQIRNRVSQDNCVTSGIVKRSTETYHDSHAAGVWEINDPTAKTNCNCLRHRVNK
GKQSLTSHGKGANTTGTKHQKGENPEKLERQQSRVNRSLTSFHRRALLTDDLLQFDMIGM
MPQVQPPPPPNANFSSTTTANVLPQLNEGVGVESPSPAAPSPLDEPHSQTVVNPSVDPTM
PKLSPHPPAEESTEKEVGPAVGKPAAESVINGGVDNVAKPAENASSVSQKALTDSVFSPN
SWPTSQGDVVKNSNVNSWISSQQRQIDSMKNLKRPVLPLKECEQDELVTNAIYSFEQVNV
WNNFPVKKAKVESLYLANLMGSQVPHDPRQNSMPSPAQKNLKPSTPQPSAPDIYEFSDEA
SINPSPISTRSFRSSRDDRSSFSKMEDDKDSSRHNGDSFIFPDRPSHGGESLGSPPETPN
PVPTPSLTHEYDLRPTQSDLDHIFDDSSDNDDPFTSPSVVAEKPTEEKKFPAVINDGSIT
PSELMRMYPTPPSNPESCHDTAMEVSCVEIKPVIKSEIFQCISNPVEDFSKDWSYVYKQP
TAAQFDMSSKYSPVDLPSANGQLSPVQQPPDYKASWQFQMPIMEKPNPTSYINVPSIENI
PSLSSRMPSSAVAASPAPFQNSVGQQRTPMSYELQSPASNASSYLNKTLNSIDNSGTNNQ
IPEVHSLIVNITLSDSRLNLFRDYNFDSCNICVCQMSIKGVDVGLYMPDPSGAPPEPPER
CSCGFSAVVNRRVGHNAGLFYEDEVEITGIRDDRYDQRKPSLLAMEFQQKDGNKPEDLNQ
VELELLLGQFTMPYSSFAATDHMFKLWLSNSSHYAGSVFDVLQLQDGNEVSYQALDQGRQ
AMEHCPPCKLDDPHMKKSCLHKWQFLQGAARIPQNSQDSVRLLKTLQPLLQDAIQNSRVT
RLWEHTYKLSGPLTWKEFHQLAGRGADENSAPQPIPSFLVGYDRDWLSVSPHALHFWDKQ
FLEPYGKPRDIAYVVLSPENDYIVNAVKLFFKELSTVYGMSKMGRHCPASKVLRDGIMRV
GRKAAETVVNETVDEWFTQIGDSPIAEKLRLYAKVCLHRLSPYLSQNMDMKSLFEPTTTH
RPGYKTPDSSAPTSTSVPTSQSDHSSFNTPQSNSSEDKENASSQENGETQKDMSFGRQDD
EDENTNCPALVIYIVNPFTYGQEWDSSLDRLVHTGLLKCYQALVKTLPPQLQQNINLQMV
PLKTILENTEKGSNTQLLKSMSFSVFNMCGWNLVHTVMGRSLTGFGPAAAAERLLKKKEV
EKHRLYSPPFILAPTKDKQAILAESTCGEKIEKSNVLFCVYCLSEDQRWLLGVCTDECGE
LMETCTINIEIPNRNRRRKASARKIGLKKYWDFILGVVSVVASPCRLVISRFGRIGHGEM
KGWSGLLSKKNIMRVSKQVKESCVQCSLLSGTDVPGVLSACLVSLEAQPSFHIMADAVKL
EEKMSSKCPLQTPRDTSVTHILVFPTSAKAQANSSGNEPAGGMDIVNHNLMEDNILECLE
TDFNADTDEDLSFLNLFESLKSDPLPNMPGSPTGMDTGHHPSIGGMNDHSSVGQNTTGSD
PQDEAPNLLQQPLAMGYYLSTARHGPLPRWFWSSAPENENHRLSCFKAALHVHNSQKHDD
FMQSTQNRNSHPLDSGLTCDVLSRRNLNTRLSLIAVLTQHANHTKLKVGLVPKIPTDRTS
DIVLKVCVREL
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacccaaatccatcaggcaacggctgttctctggaggattgttacgcgaacata
tttgcattgacggatatttgtgggataaaatggaggaaattgacagccaaagctgattat
agcccgaatacggttgatcatttggaggacccggtgctcgagtcctattccagatgtatc
caggccgatattctgtgtgtttggagaagggttcaaaggaactcggaccaaccacagaga
gttatagatcagctctcccaccataaagagttgtggatattttggtatggtgatgagccg
tctgtccttggtaacctcttgtctccttatttagatgaatccgagcatggatcatgggat
aaagacaaagataaagacaaggataattctttatcttatgaatgtcgtacattactcttc
aaagctctgcataacctcatagaaaagtgcttgctaagtaaaggttttgccagacttgga
agatggtttgtgcaaccctttgactccacccaaaccaacacagaaagaggaactcatctg
tcattcagtttcaactttttcctacatggagaaagctctgtatgtggcagtattgatgta
aaacaacatccaccagtatggaatcttaccccacagcatttgactttggcccaagaaaat
caggccaatttccaagtcatccttgccccatatggattgaatgggaccttgactggaaat
tcctatagagagacggaccaatcagcacacaaaattctggaggaatggggtcgattttac
cccctaaatgctgatgatctgaaagatgatacaagtcgcccaccacctcttgtggaagtg
attgtcgctggagttcggatgaaatatccgtcatgttatgtgttcctatgtgactctgaa
gaatctccagctcgtgtacagccccacacagtctcttccacatctcgtggtcaatctggc
ggccaaatgactccaccaatgtcagaaaatttagttggcggtgaaacaggcatcaaaatc
ttaccttccctccactattctggtaatcctagtgaactcaacaccgacatcgtagccaat
actgcaaacgcattcagcatccaaatacgcaaccgagtcagtcaggataactgtgtcaca
tcgggcatcgttaaaagatcaactgagacctatcatgacagccatgctgcaggagtatgg
gaaatcaatgaccctactgctaaaacaaactgtaattgtctgagacaccgagtaaataaa
gggaagcaaagtctgacaagtcatggaaaaggtgcgaacactacaggtactaagcatcaa
aagggcgagaatccggaaaagctcgagcgccagcagtcgcgtgtaaatcgaagtctgact
tcctttcaccgacgagctctccttaccgatgacttgcttcagtttgacatgattgggatg
atgccacaagttcagcctccccctccacctaatgccaacttcagctccacaacaactgcc
aacgtgttgcctcagctgaacgagggagtgggagtggagtcaccatccccagcggcccct
tccccattggacgaaccccacagccagactgtggtcaaccccagtgttgaccccaccatg
cctaaacttagcccccaccctccagctgaggaatcgactgaaaaggaagtgggtccagca
gtcggcaagcctgctgctgaaagtgttattaacggaggagtggacaatgttgccaaacca
gcagaaaatgcctcctcagtctcccaaaaagctttgactgacagtgtattctctcctaac
tcatggccaacaagccagggagatgttgttaaaaattctaatgttaatagctggatttcg
tctcagcagcgccagattgattctatgaaaaacctgaaaaggccagttttacctttaaag
gagtgtgagcaagatgaactagtcacaaatgctatttacagctttgaacaagtcaatgtt
tggaataactttcctgtcaagaaggccaaagtggaaagtctgtacctggccaatctaatg
ggatcccaggttccacatgatcccagacagaacagtatgcccagtccagcccagaaaaac
ctcaagccctcaacaccccagccctcggctccagacatctatgagttttctgacgaagcc
tccatcaacccatctcctatctctacacgaagcttccgcagcagtcgtgatgatcgctct
tcttttagtaaaatggaagacgataaggactccagtagacacaatggtgactcgttcatc
tttcctgatcggccgtcgcatggaggagagtctttaggatcaccacctgagacacctaat
cctgtgccgacacctagcctgacccatgagtatgatctccgacccactcagagtgacctg
gatcatatcttcgacgactcctccgataatgatgatccttttactagtccaagtgtagta
gcagaaaagccaacagaggaaaagaagtttccagctgtgataaatgatggatcaataact
ccttctgagttgatgaggatgtatcccactccaccgtcaaaccccgagtcctgtcatgac
actgccatggaggtctcctgtgttgaaataaagccagtaatcaaatcggaaatcttccag
tgcatcagtaacccagtggaagacttttcaaaggattggtcttacgtgtacaaacagccg
actgcagcccagtttgacatgtccagtaaatactccccagtcgatcttcctagtgctaat
ggtcagttgtctcctgtccaacaaccaccagactacaaagcttcatggcagttccaaatg
ccaatcatggaaaaaccaaacccaacaagttatataaatgtgccgtccatagagaacatc
cccagtctctcttcccgcatgccctcaagtgctgtggcggcatctccagccccgttccag
aacagtgtcggccaacaacgcactcccatgtcatacgagcttcagtctccagcatctaat
gcctcctcgtatcttaacaagactctcaactctatagacaattctggcaccaataaccag
attccggaagtacacagtctcattgtgaacataacattgtcagactcgagactcaactta
ttccgtgattataactttgatagctgcaatatttgtgtatgtcagatgagcattaagggt
gtggacgttggactatacatgcccgaccctagtggtgctccccccgagcctccagaacgt
tgttcgtgtggctttagtgctgttgtgaatcggcgtgttggacacaatgctggcctgttc
tatgaggatgaggtagaaataacaggcatacgtgatgatcgttacgaccaaaggaaacct
agtttattagccatggaatttcaacagaaggacggtaataagcctgaggacttgaatcaa
gtggaattggagttacttttagggcagttcacaatgccatactcgtcgtttgctgccaca
gatcacatgttcaaactatggctttccaactcctcccattatgcaggatctgtctttgat
gtgttgcagctgcaggatggaaatgaggtgtcatatcaggctttggaccagggtcgccaa
gccatggaacactgtccaccttgcaagttagatgatccacatatgaaaaagagctgcctt
cacaaatggcagtttttgcaaggtgctgccagaattcctcagaactcacaggacagtgta
cgtcttctaaaaacactacagccattactgcaggatgccatacagaacagtcgagttaca
agattatgggaacatacttataaactgtcaggtcctctcacctggaaagagttccatcag
ctggctggcagaggtgctgatgaaaactctgctccccagccaattccatcattcctggtt
ggttacgaccgagactggctctctgtctcgcctcatgctcttcacttttgggacaagcag
ttcctggagccatatggtaaaccacgcgacattgcctacgtggtgttgtctcccgaaaat
gactacattgtcaatgctgtgaagcttttctttaaagagctcagcacagtgtatggtatg
tcaaagatgggaaggcactgtccagcctctaaggttctccgtgatggcatcatgcgggtc
ggcaggaaggcagctgagactgttgtaaacgagacagtggacgaatggttcacacaaata
ggagattcacctatagctgaaaaactgagactctacgcaaaagtttgtttacatcgctta
tcaccatatctatcacaaaatatggacatgaagtccttgtttgaacctacgacgacacac
cgacctggctacaaaacacccgactcgtcagcacccacctctacttctgttcccacctca
caatcagatcactcctcattcaacacaccacagtccaactcttcagaagacaaagaaaat
gcctcctctcaggagaatggcgagacccagaaggatatgagctttggtcgacaagacgac
gaggacgagaacaccaactgtcccgctctagtcatatacattgtgaatcctttcacctat
ggccaggagtgggatagtagtctcgacagactcgtacacacagggcttctcaagtgttac
caggcccttgtcaaaacactacctccccaactacagcagaacataaacctacagatggtg
cccctgaagacaatcctggagaacacagagaaaggaagcaacacacagctgttaaagtcc
atgtcattttctgtgttcaatatgtgtggctggaacctagtacacacagtgatgggcagg
tcccttactggctttggtccagctgctgcagccgagcgtcttctcaagaaaaaggaggtt
gagaagcatcgactgtacagtcctccattcattctggcccctactaaggacaagcaggct
atactggctgagtccacatgtggggagaagattgaaaaaagtaatgtgctgttctgtgtg
tactgtctgtcagaggaccagcgctggctgctgggtgtctgtactgacgaatgtggagaa
ctcatggagacctgtacaataaacattgaaataccaaatagaaatagacggcgtaaagca
tcggcaaggaagataggtctgaagaagtactgggactttatactgggagtagtgtcagtt
gtggctagcccctgtcgtctggttattagtcgattcggacgaataggacatggagaaatg
aaaggttggtctggcctgctcagtaagaagaacatcatgcgggtaagcaagcaggtgaag
gagtcctgtgtgcagtgttccctcctcagtggaacagatgtaccaggagtgcttagtgcc
tgtcttgtctcacttgaagctcaaccttccttccatatcatggctgacgctgttaagctc
gaggaaaagatgtcttctaagtgtcctctacagactccacgagacacttcggtcacacac
atactcgtcttcccaacctctgccaaagcacaggccaactcaagtggaaatgagcctgct
ggaggaatggacatagtcaaccacaatttaatggaagacaatatcctcgagtgtttggaa
acagactttaatgctgatacagacgaagacttgtccttcctgaacttgtttgagtctctg
aagagtgacccacttcctaacatgcctggatcaccaactggcatggacaccggacaccac
ccttcaataggaggcatgaatgaccactcttctgttggacagaatactaccgggtctgat
ccccaggacgaggctcccaatctcctacagcagccgctggctatggggtactacttatct
acggcacgccatggtccactcccacgctggttctggtcatctgctcccgagaacgaaaat
cacagactctcttgctttaaggctgcactccatgtacataattcccaaaaacatgacgac
ttcatgcagtcaacacaaaatagaaactctcatcctttggactctggccttacttgtgat
gtgctaagcagaagaaacctcaacactaggctgtcactcatcgcagtactgacacaacac
gctaaccataccaaactgaaagtgggccttgtgccaaaaatacctacagacaggacttct
gatattgtgcttaaggtatgtgttagagaactttaa
DBGET
integrated database retrieval system
